| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026530
Identifier: 238026530
GI number: 238026530
Start: 951783
End: 952385
Strand: Direct
Name: 238026530
Synonym: bglu_1g08740
Alternate gene names: NA
Gene position: 951783-952385 (Clockwise)
Preceding gene: 238026529
Following gene: 238026531
Centisome position: 24.36
GC content: 62.02
Gene sequence:
>603_bases ATGATGCAAAAGCAATTCAAGCAACTGGTGCTGCTGGCAGCCATCGTGCCGACTTTCGCGCTGGCGCAGTCGCTGTCGAA TCAGGCACCGGCTGCTTCGGCCGCTGCGGCGCCGATCGATGCGGACAAGAAGGCGGCGATCACCGACCTGCTGAACGCCA TCGACGCACCGAAGCTGGTTGGCGCGATCGCGAACAGCGCGGAAATGCAGTCGAAGCAGCTGGTTCCGGCGATCCTGTCG GACGCGCTGTCGGAAAACAAGACGCTGACCGACGCGCAGAAGCAGGCGGCCGTGCCGACGCTGCAGAAGAACGCGGTGCA GAAGCTGGTTGACGGGGCGGGCAAGGTGTTCGATACGCAAGGCTTCAAGAACGACGCGATGCAGGCTCAGTACGAAGCCT ACGCGAAGTATTACAGCACGTCGGAGATCAAGGATCTGACGACGTTCTACAAGAGCCCGACGGGCCGCAAGTTCATCCAG GTGCAGGATCAGGTCGGCCGCGACGTCGTGAACGGCCTGATGCAGAAGTACATGCCGCAAGCGATCCAGGCGACCCGCGC CCAGGCCGACAAGGAAGTCGCGGCCATCAAGCCCGGTAAGTAA
Upstream 100 bases:
>100_bases CGACGCCTGACCGGGCGGCGGCTGCCGGCCGCCGGGCGGGAACCGCTGAAGCGGTCGCGCCCGGCGGTGCAACAATCGTT CATATTTCCATGAGGGAGTG
Downstream 100 bases:
>100_bases GCACGCGTCTGCCCCACGCCGGTGCAGTCCGGCGGTTTGGCGGGGCGGGGCGTCAGTGCGATAATGGCCGTTTGCGCACC AACGCAGGCGGCCATTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MMQKQFKQLVLLAAIVPTFALAQSLSNQAPAASAAAAPIDADKKAAITDLLNAIDAPKLVGAIANSAEMQSKQLVPAILS DALSENKTLTDAQKQAAVPTLQKNAVQKLVDGAGKVFDTQGFKNDAMQAQYEAYAKYYSTSEIKDLTTFYKSPTGRKFIQ VQDQVGRDVVNGLMQKYMPQAIQATRAQADKEVAAIKPGK
Sequences:
>Translated_200_residues MMQKQFKQLVLLAAIVPTFALAQSLSNQAPAASAAAAPIDADKKAAITDLLNAIDAPKLVGAIANSAEMQSKQLVPAILS DALSENKTLTDAQKQAAVPTLQKNAVQKLVDGAGKVFDTQGFKNDAMQAQYEAYAKYYSTSEIKDLTTFYKSPTGRKFIQ VQDQVGRDVVNGLMQKYMPQAIQATRAQADKEVAAIKPGK >Mature_200_residues MMQKQFKQLVLLAAIVPTFALAQSLSNQAPAASAAAAPIDADKKAAITDLLNAIDAPKLVGAIANSAEMQSKQLVPAILS DALSENKTLTDAQKQAAVPTLQKNAVQKLVDGAGKVFDTQGFKNDAMQAQYEAYAKYYSTSEIKDLTTFYKSPTGRKFIQ VQDQVGRDVVNGLMQKYMPQAIQATRAQADKEVAAIKPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21434; Mature: 21434
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQKQFKQLVLLAAIVPTFALAQSLSNQAPAASAAAAPIDADKKAAITDLLNAIDAPKLV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCHHHHH GAIANSAEMQSKQLVPAILSDALSENKTLTDAQKQAAVPTLQKNAVQKLVDGAGKVFDTQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCC GFKNDAMQAQYEAYAKYYSTSEIKDLTTFYKSPTGRKFIQVQDQVGRDVVNGLMQKYMPQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIQATRAQADKEVAAIKPGK HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMQKQFKQLVLLAAIVPTFALAQSLSNQAPAASAAAAPIDADKKAAITDLLNAIDAPKLV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCHHHHH GAIANSAEMQSKQLVPAILSDALSENKTLTDAQKQAAVPTLQKNAVQKLVDGAGKVFDTQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCC GFKNDAMQAQYEAYAKYYSTSEIKDLTTFYKSPTGRKFIQVQDQVGRDVVNGLMQKYMPQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIQATRAQADKEVAAIKPGK HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA