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The map label for this gene is ubiD [H]

Identifier: 238026447

GI number: 238026447

Start: 847811

End: 849382

Strand: Reverse

Name: ubiD [H]

Synonym: bglu_1g07890

Alternate gene names: 238026447

Gene position: 849382-847811 (Counterclockwise)

Preceding gene: 238026449

Following gene: 238026445

Centisome position: 21.74

GC content: 68.19

Gene sequence:

>1572_bases
ATGAAATACAAAGACTTACGCGATTTTTCCCAGCGCCTCGAAGGTCTCGGCGAGCTTCGTCGGGTCACGCAGCCCGTGTC
GCCCGTGCTCGAAATGACCGAGCTTTGCGATCGGGTGCTGCGCGCCGGCGGCCCGGCCCTGCTGTTCGACGCCCCCCAGG
GTTATCGGTTTCCAGTGCTCGGCAACCTGTTCGGCACGCCGCGGCGCGTGGCGCTCGGCATGGGCGTGGACGCCGACGCG
GCCGACGACGCCGCGGCGCTGACTTCGCTGCGCGATATCGGCCGCCTGCTCTCGGCGCTGAAGGAGCCCGATCCGCCGAA
GCGCCTGGCCGACGCCGGCAAGCTGCTCTCGCTCGCCAAGGCGGTGTGGGACATGGCGCCGAAGACGGTGTCCGCGCCGC
CGTGCCAGGAGCTCGTCTGGGAAGGCGCCGACGTCGATTTGCACAAGCTGCCGATCCAGACCTGCTGGCCCGGCGACATC
GGCCCGCTGCTGACCTGGGGGCTGACCGTCACGCGCGGCCCGAACAAGACGCGGCAGAACCTGGGCATCTATCGTCAGCA
ACTGATCGGCCGCAACAAGCTGATCATGCGCTGGCTCGCGCATCGCGGCGGCGCGCTCGATTTCCGCGAATTCGCGCTCG
CCCACCCCGGCAAGCCCTACCCGGTGGCCGTGGTGCTCGGCGCCGACCCCGCCACCACGCTCGGGGCCGTCGCGCCGGTG
CCCGACACGCTGTCCGAATACCAGTTCGCCGGGCTGCTGCGCGGCGCGCGCACCGAACTGGCGAAGTGCCTGACACCGGG
CGTGGACGGGCTGCAGGTGCCGGCGCGCGCCGAGATCGTGCTCGAGGGCTTCATCTACCCGCAGACGGGCACGCCAGAGC
CCGCGCCCGCCGGCGCGCCGCCACGGCCGGCCGGCACGCGCGGCGCCTTTGCCTACGAACATGCGCTCGAAGGCCCGTAC
GGCGACCACACCGGCTACTACAACGAGCAGGAGTGGTTTCCCGTGTTCACCGTCGAGCGCATCACGATGCGCCGCGACGC
GATCTACCACTCGACCTATACCGGCAAGCCGCCGGACGAGCCCGCCGTGCTGGGCGTCGCGCTCAACGAGGTGTTCGTGC
CGCTGCTGCAGAAGCAGTTCGCCGAGATCACCGACTTCTATCTGCCACCCGAGGGCTGCAGCTACCGGATGGCGATCGTG
CAGATGAAAAAGAGCTACGCCGGTCACTCGAAGCGCGTGATGTTCGGCGTCTGGAGCTTCCTGCGGCAGTTCATGTATAC
GAAGTTCATCGTGGTGGTGGACGAGGACGTGAACATCCGCGACTGGAAGGAGGTGATCTGGGCGATCACCACCCGCGTCG
ACCCGGTGCGCGACACCGTGCTGGTCGACAACACGCCGATCGACTACCTCGATTTCGCCTCGCCGGTGGCCGGCCTCGGC
TCGAAGATGGGCATCGACGCCACCAACAAATGGCCTGGCGAGACCCAGCGCGAGTGGGGCCGCCCGATCGAGATGGAAGC
CAGCGTGAAGGCGCGCGTCGATACGCTCTGGAAAGAGATCGGACTCGGTTGA

Upstream 100 bases:

>100_bases
GGATCGCGCTGCCCGGAGCCACCCCGGGTAGAATCGTTGCTCGATTTCCGGCGCCCTGCGCCGCCATCGCGCCCGATGTT
CGAGCGCCGGCAATACTCCG

Downstream 100 bases:

>100_bases
GCGCGATGCGGGCCGGTGCCGCGCAGCCGGCGGGCCGGTTCATCTTCGCCGGTCGGCGGGGCTGAGCCGCGTGTTCGCGG
TGCACGGGGTGTCACGCGGC

Product: UbiD family decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKYKDLRDFSQRLEGLGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFDAPQGYRFPVLGNLFGTPRRVALGMGVDADA
ADDAAALTSLRDIGRLLSALKEPDPPKRLADAGKLLSLAKAVWDMAPKTVSAPPCQELVWEGADVDLHKLPIQTCWPGDI
GPLLTWGLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALAHPGKPYPVAVVLGADPATTLGAVAPV
PDTLSEYQFAGLLRGARTELAKCLTPGVDGLQVPARAEIVLEGFIYPQTGTPEPAPAGAPPRPAGTRGAFAYEHALEGPY
GDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIV
QMKKSYAGHSKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVLVDNTPIDYLDFASPVAGLG
SKMGIDATNKWPGETQREWGRPIEMEASVKARVDTLWKEIGLG

Sequences:

>Translated_523_residues
MKYKDLRDFSQRLEGLGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFDAPQGYRFPVLGNLFGTPRRVALGMGVDADA
ADDAAALTSLRDIGRLLSALKEPDPPKRLADAGKLLSLAKAVWDMAPKTVSAPPCQELVWEGADVDLHKLPIQTCWPGDI
GPLLTWGLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALAHPGKPYPVAVVLGADPATTLGAVAPV
PDTLSEYQFAGLLRGARTELAKCLTPGVDGLQVPARAEIVLEGFIYPQTGTPEPAPAGAPPRPAGTRGAFAYEHALEGPY
GDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIV
QMKKSYAGHSKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVLVDNTPIDYLDFASPVAGLG
SKMGIDATNKWPGETQREWGRPIEMEASVKARVDTLWKEIGLG
>Mature_523_residues
MKYKDLRDFSQRLEGLGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFDAPQGYRFPVLGNLFGTPRRVALGMGVDADA
ADDAAALTSLRDIGRLLSALKEPDPPKRLADAGKLLSLAKAVWDMAPKTVSAPPCQELVWEGADVDLHKLPIQTCWPGDI
GPLLTWGLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALAHPGKPYPVAVVLGADPATTLGAVAPV
PDTLSEYQFAGLLRGARTELAKCLTPGVDGLQVPARAEIVLEGFIYPQTGTPEPAPAGAPPRPAGTRGAFAYEHALEGPY
GDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIV
QMKKSYAGHSKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVLVDNTPIDYLDFASPVAGLG
SKMGIDATNKWPGETQREWGRPIEMEASVKARVDTLWKEIGLG

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=522, Percent_Identity=65.5172413793103, Blast_Score=699, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=486, Percent_Identity=23.8683127572016, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 57751; Mature: 57751

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKDLRDFSQRLEGLGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFDAPQGYRFPVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
GNLFGTPRRVALGMGVDADAADDAAALTSLRDIGRLLSALKEPDPPKRLADAGKLLSLAK
HCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVWDMAPKTVSAPPCQELVWEGADVDLHKLPIQTCWPGDIGPLLTWGLTVTRGPNKTRQN
HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHHCEEEECCCCHHHHH
LGIYRQQLIGRNKLIMRWLAHRGGALDFREFALAHPGKPYPVAVVLGADPATTLGAVAPV
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCC
PDTLSEYQFAGLLRGARTELAKCLTPGVDGLQVPARAEIVLEGFIYPQTGTPEPAPAGAP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
PRPAGTRGAFAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCC
PAVLGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKKSYAGHSKRVMFGVWSF
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVLVDNTPIDYLDFASPVAGLG
HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCC
SKMGIDATNKWPGETQREWGRPIEMEASVKARVDTLWKEIGLG
CCCCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKDLRDFSQRLEGLGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFDAPQGYRFPVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
GNLFGTPRRVALGMGVDADAADDAAALTSLRDIGRLLSALKEPDPPKRLADAGKLLSLAK
HCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVWDMAPKTVSAPPCQELVWEGADVDLHKLPIQTCWPGDIGPLLTWGLTVTRGPNKTRQN
HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHHCEEEECCCCHHHHH
LGIYRQQLIGRNKLIMRWLAHRGGALDFREFALAHPGKPYPVAVVLGADPATTLGAVAPV
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCC
PDTLSEYQFAGLLRGARTELAKCLTPGVDGLQVPARAEIVLEGFIYPQTGTPEPAPAGAP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
PRPAGTRGAFAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCC
PAVLGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKKSYAGHSKRVMFGVWSF
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVLVDNTPIDYLDFASPVAGLG
HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCC
SKMGIDATNKWPGETQREWGRPIEMEASVKARVDTLWKEIGLG
CCCCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA