| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026445
Identifier: 238026445
GI number: 238026445
Start: 845912
End: 846841
Strand: Reverse
Name: 238026445
Synonym: bglu_1g07870
Alternate gene names: NA
Gene position: 846841-845912 (Counterclockwise)
Preceding gene: 238026447
Following gene: 238026444
Centisome position: 21.68
GC content: 74.52
Gene sequence:
>930_bases ATGTCCCTTCCGTCCGTTCCTCGTCTCGGCTTCATCGGCGCCGGCAGGCTCGCCCACTGCCTCGCGCGCCGCTTCGCGCA GGCCGGCTTTCCCGTGGTCGCGATTGCGAGCCGCTCGCCGGCGCCCGCGCAGGCGCTCGCCGCGCGAATCGACGGCTGCG TGGCCGCCGCGAGTGCGCAGGCCGTGGTGGATGCTGCCGAACTGATCTTTTTGACCGTCTCCGACGACGGCATCGGCCCG GTGGCCGCGTCGCTGCGCTTCGATCCGGCCCGCGCGCCGACGCAGGCGCTCGTCCACTGCAGCGGCGCGTCGAGCCTGGA ACTGCTGGCGCCCGCGCGCGCGCAGCAGGCGCAGACGGGTGGCTTCCACCCGCTCTACCTGTTCGGCGGCGGCGATGCCG ACTTGACGCGCATCGCTGGCTGCTCGGTCACGATCGAGGCCGGCGGCACGCTGCGCCCCGTGCTCGACGCGCTTGCCGCC GCGCTCGGCTGCCATCCGCTGACGATTCCGGCCGGCGGCCGGATGCTTTACCACGCAGCCGCGAACTACGCGGCGAGCTT CGCGCTGTGCGGCCTGGCCGAAGCCGTCGCGCTGTGGCGCGAACTCGGCATGGACGAGGCCGACGCGCTGCGCGCGCTGC TGCCGATGCTGTCCGGCACTCTCGAAACCGCGCGCGACAAGGGGCTCGCCAATGCACTGGCGGGGCCGGTCTCGCGCGGT GACGCCGGCATCGTCGAGCGGCAGCTCGCGCTGCTCGACGAGCTGGGCGGCGACCACGCCGTGCTCTACGCGCTGATGAC GCGCCGAGCCGTGGCGCTGGCCAGGCGCCGCACGGCACCGCCCGCCGGACTCGACGCGCTGGCCGGCGGCGTCGAGACGC TGCTCGCCGAGCACCTGGTTCGGCCTGCCCCAGCGAGCCGCGAGCCGTGA
Upstream 100 bases:
>100_bases GATTGCGCCCCGGTTTTGCCTCGTGCCTGTGGGTATCGCATCAAATACGGGATACTGGCGGTTGATCGATTCATTCCGTG CCGTTCGCGCCATGACCGTC
Downstream 100 bases:
>100_bases TAAGGTGACGCCCGATGCAGGCCATCTTGATGCGGTGGCCGCACGCTACCCGACAGCCATACTAAGGATTTCAACGATGC TCGGCGAAATCGCCCGCTTT
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: Cytoplasmic Protein; Pyrroline-5-Carboxylate Reductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain Protein; NADP Oxidoreductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain; Oxidoreductase; Oxidoreductase Domain-Containing Protein; Pantoate/Beta-Alanine Ligase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSLPSVPRLGFIGAGRLAHCLARRFAQAGFPVVAIASRSPAPAQALAARIDGCVAAASAQAVVDAAELIFLTVSDDGIGP VAASLRFDPARAPTQALVHCSGASSLELLAPARAQQAQTGGFHPLYLFGGGDADLTRIAGCSVTIEAGGTLRPVLDALAA ALGCHPLTIPAGGRMLYHAAANYAASFALCGLAEAVALWRELGMDEADALRALLPMLSGTLETARDKGLANALAGPVSRG DAGIVERQLALLDELGGDHAVLYALMTRRAVALARRRTAPPAGLDALAGGVETLLAEHLVRPAPASREP
Sequences:
>Translated_309_residues MSLPSVPRLGFIGAGRLAHCLARRFAQAGFPVVAIASRSPAPAQALAARIDGCVAAASAQAVVDAAELIFLTVSDDGIGP VAASLRFDPARAPTQALVHCSGASSLELLAPARAQQAQTGGFHPLYLFGGGDADLTRIAGCSVTIEAGGTLRPVLDALAA ALGCHPLTIPAGGRMLYHAAANYAASFALCGLAEAVALWRELGMDEADALRALLPMLSGTLETARDKGLANALAGPVSRG DAGIVERQLALLDELGGDHAVLYALMTRRAVALARRRTAPPAGLDALAGGVETLLAEHLVRPAPASREP >Mature_308_residues SLPSVPRLGFIGAGRLAHCLARRFAQAGFPVVAIASRSPAPAQALAARIDGCVAAASAQAVVDAAELIFLTVSDDGIGPV AASLRFDPARAPTQALVHCSGASSLELLAPARAQQAQTGGFHPLYLFGGGDADLTRIAGCSVTIEAGGTLRPVLDALAAA LGCHPLTIPAGGRMLYHAAANYAASFALCGLAEAVALWRELGMDEADALRALLPMLSGTLETARDKGLANALAGPVSRGD AGIVERQLALLDELGGDHAVLYALMTRRAVALARRRTAPPAGLDALAGGVETLLAEHLVRPAPASREP
Specific function: Unknown
COG id: COG5495
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31450; Mature: 31318
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPSVPRLGFIGAGRLAHCLARRFAQAGFPVVAIASRSPAPAQALAARIDGCVAAASAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH AVVDAAELIFLTVSDDGIGPVAASLRFDPARAPTQALVHCSGASSLELLAPARAQQAQTG HHHHHEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHEECCCCCCHHHHCCHHHHHHHCC GFHPLYLFGGGDADLTRIAGCSVTIEAGGTLRPVLDALAAALGCHPLTIPAGGRMLYHAA CCCEEEEEECCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCEEHHHH ANYAASFALCGLAEAVALWRELGMDEADALRALLPMLSGTLETARDKGLANALAGPVSRG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAGIVERQLALLDELGGDHAVLYALMTRRAVALARRRTAPPAGLDALAGGVETLLAEHLV CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC RPAPASREP CCCCCCCCC >Mature Secondary Structure SLPSVPRLGFIGAGRLAHCLARRFAQAGFPVVAIASRSPAPAQALAARIDGCVAAASAQ CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH AVVDAAELIFLTVSDDGIGPVAASLRFDPARAPTQALVHCSGASSLELLAPARAQQAQTG HHHHHEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHEECCCCCCHHHHCCHHHHHHHCC GFHPLYLFGGGDADLTRIAGCSVTIEAGGTLRPVLDALAAALGCHPLTIPAGGRMLYHAA CCCEEEEEECCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCEEHHHH ANYAASFALCGLAEAVALWRELGMDEADALRALLPMLSGTLETARDKGLANALAGPVSRG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DAGIVERQLALLDELGGDHAVLYALMTRRAVALARRRTAPPAGLDALAGGVETLLAEHLV CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC RPAPASREP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA