| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pgm [H]
Identifier: 238026413
GI number: 238026413
Start: 812001
End: 813395
Strand: Direct
Name: pgm [H]
Synonym: bglu_1g07480
Alternate gene names: 238026413
Gene position: 812001-813395 (Clockwise)
Preceding gene: 238026407
Following gene: 238026414
Centisome position: 20.79
GC content: 69.25
Gene sequence:
>1395_bases ATGATTTCCCAATCCATCTTCAAGGCATACGACATTCGCGGTGTGATCGGCAAGACGCTCGATGCCGAGACGGCCCGCTC GATCGGTCGGGCATTCGGCAGCGAGGTGCGCGCCCAGGGCGGCGACGCCGTGGTGGTGGCGCGCGACGGCCGGCTGTCCG GGCCGGAGCTGATCGGCGCGCTCGCCGACGGGCTGCGCGCGGCGGGCGTCGACGTGGTCGACGTCGGCATGGTGCCGACC CCGGTGGGTTATTTCGCCGCCAGCGTGCCGCTGCCGCTCGCGGCCGGCGAGCGCCGCGTCGATTCGTGCATCGTCGTGAC CGGCAGCCACAACCCGCCCGACTACAACGGCTTCAAGATGGTGCTGCGCGGCGCGGCGATCTACGGCGAGCAGATCCAGG CGCTGTATCGCCGCATCGTGGCGGGAGACTTCGCCGAGGGCAGCGGCAGCTACGAGCGGCACGACGTGGCCGAGGCCTAC CTGCAGCGCATCGTCGGCGACATCAAGCTGGCGCGGCCGATCAAGATCGTGGTCGACACCGGCAACGGCGTGGCGGGCGA ACTCGCGCCGCGCCTGTTCAAGGCGCTCGGCTGCGAACTCGTCGAGCTGTTCACCGAGATCGACGGCAACTTCCCGAACC ACCATCCGGACCCGGCGCACCCCGAGAACCTGCAGGACGTGATCCGCGCGCTGAAGCAGACCGATGCCGAGATCGGCTTC GCGTTCGACGGCGACGGCGACCGGCTCGGGGTGGTCACCAAGGACGGCCAGATCATCTATCCGGACCGCCAGATGATGCT GTTCGCCGAGGAAGTGCTGTCGCGCAACCCGGGCGCGCAGATCATCTACGACGTCAAATGCACGCGCAACCTGGCGCAGT GGATTCGCGACAAGGGCGGCGAGCCGCTGATGTGGAAGACCGGCCACTCGCTCGTGAAGGCCAAGCTGCGCGAGACCGGC GCGCCGCTCGCCGGCGAGATGAGCGGCCACGTGTTCTTCAAGGATCGCTGGTACGGCTTCGACGACGGCCTCTACACGGG CGCGCGCCTGCTCGAGATCCTCGCGCGCGTGGCCGACCCGAGCGCGCTGCTCAACGGCCTGCCGAACGCCGAATCGACGC CGGAGCTGCAGCTCAAGCTCGAGGAAGGCGAGAACGTCGCCCTGATCGAGGCGCTGCGCGCGAACGCGAAGTTCGACGGG GCCGACGAGGTGGTCACGATCGACGGGCTGCGCGTCGAGTATCCGGACGGCTTCGGTCTGGCCCGCTCGTCGAACACCAC GCCGGTGGTGGTGCTGCGCTTCGAGGCGAACACGGCCGAGGCGCTCGCGCGCATTCAGGACGACTTCCGCCGCGCGCTGA CGGCCGCCAAGCCCGACGCCAAGCTGCCGTTCTGA
Upstream 100 bases:
>100_bases TTCGGGTTCGAACCCGACATCGGCGGGGTGCCGGCCGGCAGCGTATCGCCGCGGCGCGCGGGATTGCCACCTTTTTCCAT GCACGACAGAGAGTGAATCG
Downstream 100 bases:
>100_bases CGCGGCGCACCCGCGCCGGCGCGCCGCTGGCCGCGCCGGTGCCGCGCTCGCGCGGCGCTTGCCGTGGTGCGCGGCCCGGC CGCCCGGGCCCTTGCTTGCT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MISQSIFKAYDIRGVIGKTLDAETARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELIGALADGLRAAGVDVVDVGMVPT PVGYFAASVPLPLAAGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVAGDFAEGSGSYERHDVAEAY LQRIVGDIKLARPIKIVVDTGNGVAGELAPRLFKALGCELVELFTEIDGNFPNHHPDPAHPENLQDVIRALKQTDAEIGF AFDGDGDRLGVVTKDGQIIYPDRQMMLFAEEVLSRNPGAQIIYDVKCTRNLAQWIRDKGGEPLMWKTGHSLVKAKLRETG APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADPSALLNGLPNAESTPELQLKLEEGENVALIEALRANAKFDG ADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEANTAEALARIQDDFRRALTAAKPDAKLPF
Sequences:
>Translated_464_residues MISQSIFKAYDIRGVIGKTLDAETARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELIGALADGLRAAGVDVVDVGMVPT PVGYFAASVPLPLAAGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVAGDFAEGSGSYERHDVAEAY LQRIVGDIKLARPIKIVVDTGNGVAGELAPRLFKALGCELVELFTEIDGNFPNHHPDPAHPENLQDVIRALKQTDAEIGF AFDGDGDRLGVVTKDGQIIYPDRQMMLFAEEVLSRNPGAQIIYDVKCTRNLAQWIRDKGGEPLMWKTGHSLVKAKLRETG APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADPSALLNGLPNAESTPELQLKLEEGENVALIEALRANAKFDG ADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEANTAEALARIQDDFRRALTAAKPDAKLPF >Mature_464_residues MISQSIFKAYDIRGVIGKTLDAETARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELIGALADGLRAAGVDVVDVGMVPT PVGYFAASVPLPLAAGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVAGDFAEGSGSYERHDVAEAY LQRIVGDIKLARPIKIVVDTGNGVAGELAPRLFKALGCELVELFTEIDGNFPNHHPDPAHPENLQDVIRALKQTDAEIGF AFDGDGDRLGVVTKDGQIIYPDRQMMLFAEEVLSRNPGAQIIYDVKCTRNLAQWIRDKGGEPLMWKTGHSLVKAKLRETG APLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADPSALLNGLPNAESTPELQLKLEEGENVALIEALRANAKFDG ADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEANTAEALARIQDDFRRALTAAKPDAKLPF
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=454, Percent_Identity=35.9030837004405, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1789566, Length=370, Percent_Identity=28.9189189189189, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 50113; Mature: 50113
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQSIFKAYDIRGVIGKTLDAETARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELIGA CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH LADGLRAAGVDVVDVGMVPTPVGYFAASVPLPLAAGERRVDSCIVVTGSHNPPDYNGFKM HHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH VLRGAAIYGEQIQALYRRIVAGDFAEGSGSYERHDVAEAYLQRIVGDIKLARPIKIVVDT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEC GNGVAGELAPRLFKALGCELVELFTEIDGNFPNHHPDPAHPENLQDVIRALKQTDAEIGF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE AFDGDGDRLGVVTKDGQIIYPDRQMMLFAEEVLSRNPGAQIIYDVKCTRNLAQWIRDKGG EECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCC EPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADP CCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCH SALLNGLPNAESTPELQLKLEEGENVALIEALRANAKFDGADEVVTIDGLRVEYPDGFGL HHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCCCCCEEEECCEEEECCCCCCC ARSSNTTPVVVLRFEANTAEALARIQDDFRRALTAAKPDAKLPF CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MISQSIFKAYDIRGVIGKTLDAETARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELIGA CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH LADGLRAAGVDVVDVGMVPTPVGYFAASVPLPLAAGERRVDSCIVVTGSHNPPDYNGFKM HHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH VLRGAAIYGEQIQALYRRIVAGDFAEGSGSYERHDVAEAYLQRIVGDIKLARPIKIVVDT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEC GNGVAGELAPRLFKALGCELVELFTEIDGNFPNHHPDPAHPENLQDVIRALKQTDAEIGF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE AFDGDGDRLGVVTKDGQIIYPDRQMMLFAEEVLSRNPGAQIIYDVKCTRNLAQWIRDKGG EECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCC EPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADP CCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCH SALLNGLPNAESTPELQLKLEEGENVALIEALRANAKFDGADEVVTIDGLRVEYPDGFGL HHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCCCCCEEEECCEEEECCCCCCC ARSSNTTPVVVLRFEANTAEALARIQDDFRRALTAAKPDAKLPF CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157643; 8188595 [H]