Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is galE [H]

Identifier: 238026409

GI number: 238026409

Start: 807457

End: 808479

Strand: Reverse

Name: galE [H]

Synonym: bglu_1g07440

Alternate gene names: 238026409

Gene position: 808479-807457 (Counterclockwise)

Preceding gene: 238026410

Following gene: 238026408

Centisome position: 20.7

GC content: 69.7

Gene sequence:

>1023_bases
ATGAGTGACAAAGGCACCATCCTCGTGACGGGCGGTGCGGGCTTCATCGGCTCGCATACGGCCGTCGAACTGCTCGGCCA
CGGCTACGACGTCGTGATCGTCGACAACCTGGTCAACAGCAAGCGCGTGGCCGTCGACCGGATCGCCGAGATCGCGGGCC
GCGCACCCGTGTTCCACGAGCTCGACGCGTGCGACGAGGCCGCGCTCGACAAGGTGTTCGACGCCCACCCGATCACGGCG
GCGATCCACTTCGCGGCGCTCAAGGCGGTGGGCGAGTCGGTGGCCAAGCCGATCGACTATTACCGCAACAACCTGGGCAG
CCTGCTCTCGCTGCTCGCGGTGATGCGCGCGCGCGAGGTCAGGCAGATGGTGTTCAGCTCGTCGGCGACCGTCTACGGCG
TGCCCGAGCGCTCGCCGATCGACGAATCGTTTCCGCTCTCAGCCACCAACCCCTACGGCCAGACCAAGCTGATGGCCGAG
CAGATCCTGCGCGACCTCGAGATCTCCGACCCGTCGTGGCGGATCGCGACGCTGCGCTACTTCAACCCGGTGGGCGCGCA
CGAGAGCGGCCTGATCGGCGAGGACCCGGCCGGCCTGCCGAACAACCTGATGCCCTATGTCGCGCAGGTCGCGGTGGGCA
AGCTCGAACGCCTGCGCGTATTCGGCAACGACTACCCGACGCCCGACGGCACCGGCGTGCGCGACTACATCCACGTGGTC
GACCTGGCGCGCGGCCACCTCGCCGCGCTCGACGCGCTGCGCCAGCGCGACGCCAGCTTCACGGTGAACCTCGGCACCGG
GCGCGGCTACAGCGTGCTCGACATCGTGCGCGCGTTCGAGGCCGCGAGCGGGCGCAAGGTGCCCTACGAAATCGTCGCGC
GCCGGCCCGGCGACGTCGCCGAGTGCTACGCGGACCCGGCCCGCGCGGCCGAGCTGATCGGCTGGCGCGCCGAGTACGGC
ATCGAGCGCATGTGCACCGACCACTGGCGCTGGCAGGAGAAGAATCCGCGCGGCTTCGCCTGA

Upstream 100 bases:

>100_bases
CGAGAAAGTGTTGCGCGAGTTCGACGAGGCGAACGTCGTCGAACGCTATCGAGAAACCATCCGTGCACTGACAGGCACGG
CACTCTGAAGGAGGGCAAGC

Downstream 100 bases:

>100_bases
GCTGCGCGGGCGGCACGCGGCACGGCCAGCCCGCCCGGGCTCGGCCGCGCCGCCCGCGTGCCGGCCCGGCCGCGGATCCC
GCGCAATCCCTTGACGCACA

Product: UDP-glucose 4-epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSDKGTILVTGGAGFIGSHTAVELLGHGYDVVIVDNLVNSKRVAVDRIAEIAGRAPVFHELDACDEAALDKVFDAHPITA
AIHFAALKAVGESVAKPIDYYRNNLGSLLSLLAVMRAREVRQMVFSSSATVYGVPERSPIDESFPLSATNPYGQTKLMAE
QILRDLEISDPSWRIATLRYFNPVGAHESGLIGEDPAGLPNNLMPYVAQVAVGKLERLRVFGNDYPTPDGTGVRDYIHVV
DLARGHLAALDALRQRDASFTVNLGTGRGYSVLDIVRAFEAASGRKVPYEIVARRPGDVAECYADPARAAELIGWRAEYG
IERMCTDHWRWQEKNPRGFA

Sequences:

>Translated_340_residues
MSDKGTILVTGGAGFIGSHTAVELLGHGYDVVIVDNLVNSKRVAVDRIAEIAGRAPVFHELDACDEAALDKVFDAHPITA
AIHFAALKAVGESVAKPIDYYRNNLGSLLSLLAVMRAREVRQMVFSSSATVYGVPERSPIDESFPLSATNPYGQTKLMAE
QILRDLEISDPSWRIATLRYFNPVGAHESGLIGEDPAGLPNNLMPYVAQVAVGKLERLRVFGNDYPTPDGTGVRDYIHVV
DLARGHLAALDALRQRDASFTVNLGTGRGYSVLDIVRAFEAASGRKVPYEIVARRPGDVAECYADPARAAELIGWRAEYG
IERMCTDHWRWQEKNPRGFA
>Mature_339_residues
SDKGTILVTGGAGFIGSHTAVELLGHGYDVVIVDNLVNSKRVAVDRIAEIAGRAPVFHELDACDEAALDKVFDAHPITAA
IHFAALKAVGESVAKPIDYYRNNLGSLLSLLAVMRAREVRQMVFSSSATVYGVPERSPIDESFPLSATNPYGQTKLMAEQ
ILRDLEISDPSWRIATLRYFNPVGAHESGLIGEDPAGLPNNLMPYVAQVAVGKLERLRVFGNDYPTPDGTGVRDYIHVVD
LARGHLAALDALRQRDASFTVNLGTGRGYSVLDIVRAFEAASGRKVPYEIVARRPGDVAECYADPARAAELIGWRAEYGI
ERMCTDHWRWQEKNPRGFA

Specific function: Galactose metabolism; third step. [C]

COG id: COG1087

COG function: function code M; UDP-glucose 4-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI56237023, Length=347, Percent_Identity=56.4841498559078, Blast_Score=411, Evalue=1e-115,
Organism=Homo sapiens, GI56118217, Length=347, Percent_Identity=56.4841498559078, Blast_Score=411, Evalue=1e-115,
Organism=Homo sapiens, GI189083684, Length=347, Percent_Identity=56.4841498559078, Blast_Score=411, Evalue=1e-115,
Organism=Homo sapiens, GI42516563, Length=319, Percent_Identity=23.5109717868339, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI7657641, Length=275, Percent_Identity=25.8181818181818, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI1786974, Length=334, Percent_Identity=52.9940119760479, Blast_Score=370, Evalue=1e-103,
Organism=Escherichia coli, GI48994969, Length=354, Percent_Identity=25.1412429378531, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788353, Length=362, Percent_Identity=25.414364640884, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982035, Length=344, Percent_Identity=54.9418604651163, Blast_Score=386, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI71982038, Length=346, Percent_Identity=54.6242774566474, Blast_Score=386, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6319493, Length=347, Percent_Identity=51.0086455331412, Blast_Score=354, Evalue=1e-98,
Organism=Drosophila melanogaster, GI19923002, Length=344, Percent_Identity=55.5232558139535, Blast_Score=386, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR005886
- InterPro:   IPR016040
- InterPro:   IPR008089 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 37120; Mature: 36988

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKGTILVTGGAGFIGSHTAVELLGHGYDVVIVDNLVNSKRVAVDRIAEIAGRAPVFHE
CCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH
LDACDEAALDKVFDAHPITAAIHFAALKAVGESVAKPIDYYRNNLGSLLSLLAVMRAREV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQMVFSSSATVYGVPERSPIDESFPLSATNPYGQTKLMAEQILRDLEISDPSWRIATLRY
HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEE
FNPVGAHESGLIGEDPAGLPNNLMPYVAQVAVGKLERLRVFGNDYPTPDGTGVRDYIHVV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
DLARGHLAALDALRQRDASFTVNLGTGRGYSVLDIVRAFEAASGRKVPYEIVARRPGDVA
HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
ECYADPARAAELIGWRAEYGIERMCTDHWRWQEKNPRGFA
HHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDKGTILVTGGAGFIGSHTAVELLGHGYDVVIVDNLVNSKRVAVDRIAEIAGRAPVFHE
CCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH
LDACDEAALDKVFDAHPITAAIHFAALKAVGESVAKPIDYYRNNLGSLLSLLAVMRAREV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQMVFSSSATVYGVPERSPIDESFPLSATNPYGQTKLMAEQILRDLEISDPSWRIATLRY
HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEE
FNPVGAHESGLIGEDPAGLPNNLMPYVAQVAVGKLERLRVFGNDYPTPDGTGVRDYIHVV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
DLARGHLAALDALRQRDASFTVNLGTGRGYSVLDIVRAFEAASGRKVPYEIVARRPGDVA
HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
ECYADPARAAELIGWRAEYGIERMCTDHWRWQEKNPRGFA
HHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]