| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is galE [H]
Identifier: 238026405
GI number: 238026405
Start: 802126
End: 803109
Strand: Direct
Name: galE [H]
Synonym: bglu_1g07400
Alternate gene names: 238026405
Gene position: 802126-803109 (Clockwise)
Preceding gene: 238026404
Following gene: 238026406
Centisome position: 20.53
GC content: 74.7
Gene sequence:
>984_bases GTGACGCGGATCGTCGTGACGGGCGCGAGCGGCTTCGTGGGCCGGGCCACCACGGCCGCGCTGGCCGCGCGCGGCGTGGA GGTGGTGGCACTGCTGCGGCGCCCAGACCGCACCATCGGGCAGGCAAGCGAATGGCTGCATCCGGCGGCCGATTTCGCGG GGCTCGGCGAACCGGCCAGGCCGTTTCCCGATGGCGTGGATGCCGTGATCCACGCGGCCGCCCGGGTGCATGTGATGCGC GAGGCGGCGAGCGAAGCGGCGGAGGCGGCGTTCGTGGCGACCAACGTGGCGGGCAGCCTGCGTGTCGCGCGCGCGGCGCG CGAGCGCGGCGCGCGGCGCTTCGTGTTCGTCAGCAGTATCAAGGCGGTGGCCGAGCGTGACCACGGCGAGCCGCTCGACG AGCGCACCCCGCCGGCTCCCGAGGACGCCTACGGCCGCTCGAAACTGCAGGCGGAACTCGCGCTGCGCGAATATGGCGCG AGCACCGGCATGGAGATCGTGATCGTGCGCCCGCCGCTCGTCTACGGGGCCGGCGTGCGCGCGAACTTCATGAGCATGAT GCGGGCGGTCGCGCGCGGGCTGCCGCTGCCGCTCGGCGCGATCACGGCGCGGCGCAGCCTCGTGCATGTCGGGAATCTGG CCGATGCGCTGGCGCTCTGCGCGCTCGACGCGCGCGCGGCGGGTGCGGCGGGCGAGCGGTGCTTCCACGTGGCCGATGCC GGCTCGCTGACCGTCTCCGAACTGCTGCGCGCGATCGGCCGCCACCTCGGCCGGCCCGCGCGGCTGCTGCCGGTGCCGGT GCCGGTGTTGCGCGCGCTCGGGCGCGCGACGGGCAGGGGGGCGCAGATCGACCGGCTCACGCAGAACCTGCGCGTGAGCC ATGCCGCGCTCGCCGACGCGCTCGACTGGCAACCGCCCATCTCGACCGACGAGGGGCTGGCTGCCACCGCCCGGTGGTAC CGATCAACGACGAAGCACGAGTAA
Upstream 100 bases:
>100_bases CCCATTACGGCGGCCATGCGGCGCGCAAGGGCTGGCTGCACGTGAAGCTGTTCGGCGCATCGGCGGTCCGGTTCTTCAAT CGTTTCGGCTGGAGGCTCTG
Downstream 100 bases:
>100_bases AATTCAGATCATGCTTACCACCGCTTTTCCCCACTGGAGCGATGCGTTGCGCGTGCTCGCCATCGCGGGCGTCGGCAGCA CGCTGATCTTGCGTGTGCTG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTRIVVTGASGFVGRATTAALAARGVEVVALLRRPDRTIGQASEWLHPAADFAGLGEPARPFPDGVDAVIHAAARVHVMR EAASEAAEAAFVATNVAGSLRVARAARERGARRFVFVSSIKAVAERDHGEPLDERTPPAPEDAYGRSKLQAELALREYGA STGMEIVIVRPPLVYGAGVRANFMSMMRAVARGLPLPLGAITARRSLVHVGNLADALALCALDARAAGAAGERCFHVADA GSLTVSELLRAIGRHLGRPARLLPVPVPVLRALGRATGRGAQIDRLTQNLRVSHAALADALDWQPPISTDEGLAATARWY RSTTKHE
Sequences:
>Translated_327_residues MTRIVVTGASGFVGRATTAALAARGVEVVALLRRPDRTIGQASEWLHPAADFAGLGEPARPFPDGVDAVIHAAARVHVMR EAASEAAEAAFVATNVAGSLRVARAARERGARRFVFVSSIKAVAERDHGEPLDERTPPAPEDAYGRSKLQAELALREYGA STGMEIVIVRPPLVYGAGVRANFMSMMRAVARGLPLPLGAITARRSLVHVGNLADALALCALDARAAGAAGERCFHVADA GSLTVSELLRAIGRHLGRPARLLPVPVPVLRALGRATGRGAQIDRLTQNLRVSHAALADALDWQPPISTDEGLAATARWY RSTTKHE >Mature_326_residues TRIVVTGASGFVGRATTAALAARGVEVVALLRRPDRTIGQASEWLHPAADFAGLGEPARPFPDGVDAVIHAAARVHVMRE AASEAAEAAFVATNVAGSLRVARAARERGARRFVFVSSIKAVAERDHGEPLDERTPPAPEDAYGRSKLQAELALREYGAS TGMEIVIVRPPLVYGAGVRANFMSMMRAVARGLPLPLGAITARRSLVHVGNLADALALCALDARAAGAAGERCFHVADAG SLTVSELLRAIGRHLGRPARLLPVPVPVLRALGRATGRGAQIDRLTQNLRVSHAALADALDWQPPISTDEGLAATARWYR STTKHE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: =5.1.3.2 [H]
Molecular weight: Translated: 34530; Mature: 34399
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIVVTGASGFVGRATTAALAARGVEVVALLRRPDRTIGQASEWLHPAADFAGLGEPAR CCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCC PFPDGVDAVIHAAARVHVMREAASEAAEAAFVATNVAGSLRVARAARERGARRFVFVSSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH KAVAERDHGEPLDERTPPAPEDAYGRSKLQAELALREYGASTGMEIVIVRPPLVYGAGVR HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHH ANFMSMMRAVARGLPLPLGAITARRSLVHVGNLADALALCALDARAAGAAGERCFHVADA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC GSLTVSELLRAIGRHLGRPARLLPVPVPVLRALGRATGRGAQIDRLTQNLRVSHAALADA CCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LDWQPPISTDEGLAATARWYRSTTKHE HCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TRIVVTGASGFVGRATTAALAARGVEVVALLRRPDRTIGQASEWLHPAADFAGLGEPAR CEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCC PFPDGVDAVIHAAARVHVMREAASEAAEAAFVATNVAGSLRVARAARERGARRFVFVSSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH KAVAERDHGEPLDERTPPAPEDAYGRSKLQAELALREYGASTGMEIVIVRPPLVYGAGVR HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHH ANFMSMMRAVARGLPLPLGAITARRSLVHVGNLADALALCALDARAAGAAGERCFHVADA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC GSLTVSELLRAIGRHLGRPARLLPVPVPVLRALGRATGRGAQIDRLTQNLRVSHAALADA CCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LDWQPPISTDEGLAATARWYRSTTKHE HCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8820651; 10521656 [H]