| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is wbbL [H]
Identifier: 238026404
GI number: 238026404
Start: 801278
End: 802129
Strand: Direct
Name: wbbL [H]
Synonym: bglu_1g07390
Alternate gene names: 238026404
Gene position: 801278-802129 (Clockwise)
Preceding gene: 238026403
Following gene: 238026405
Centisome position: 20.51
GC content: 68.19
Gene sequence:
>852_bases ATGCACGATTTCGACGCTTCCCGGCCCGGCCGCGACCGACTCGTGGTGTCGATCGTGGCGTACCGGCCCGACGTTCCGGT GCTGACGCACACGATCGAACGGCTGGCCGGCGCGGTGGCCCACGCGCGCGCGCGGCGCGGTGCATTGCCGGTGACGGTGC TTCTGATCGACAATGGCGGGCTCGACGCGGCCGCGGGTGCCGACCTGCTGCGGCACCTGGCCAGCGCGGGAATCGAAGGG CGCGTGATCTCGGGGCACGGCAACGTCGGATACGGTCGTGGTCACAATCTCGCGATCGACCTGGTGCCCGCGGACTTTCA TCTGATCCTGAATCCGGACATCGACCTCGCACCGGATGCGCTGAGCGAGGCGCTCGCTTTCCTCGACGGCCATCCCGAGG TCGGCCTGCTGTCGCCCTACGTGGCGGGGGCCGACGGCGCGATGCAGTATCTGTGCCGACGCCGGCCCACCGTGCTGAGT CTGTTCGTGCGCGGTTTCCTGCCCCAACGGCTGCGCGCGCCGTTCGCCGCGCTGCTGGCCGACTACGAGATGCGCGACGT GATCGACGGCGAGCACGTGCGGCTCGATCCGCCGATCGTCAGCGGCTGCTTCATGCTGTTTCGCACCTCGGTGTTGCGCC GGCTGGGCGGCTTCGATCCGCGCTATTTCCTGTATTTCGAGGATTACGATCTGAGCCTGCGTACCCACGAGGTCGCGCGC ATCGCCTATGTGCCCGCCGTGCGCACCACCCATTACGGCGGCCATGCGGCGCGCAAGGGCTGGCTGCACGTGAAGCTGTT CGGCGCATCGGCGGTCCGGTTCTTCAATCGTTTCGGCTGGAGGCTCTGGTGA
Upstream 100 bases:
>100_bases CATCGCGCGCGGCGTTCTACGCTTATGCGACCGACCCGGCCCAGGCCGAGGCGTTTCGCAGCGCGCTCGCCTGACCCGCC CGCTGCCGAGGCCCGCATCC
Downstream 100 bases:
>100_bases CGCGGATCGTCGTGACGGGCGCGAGCGGCTTCGTGGGCCGGGCCACCACGGCCGCGCTGGCCGCGCGCGGCGTGGAGGTG GTGGCACTGCTGCGGCGCCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MHDFDASRPGRDRLVVSIVAYRPDVPVLTHTIERLAGAVAHARARRGALPVTVLLIDNGGLDAAAGADLLRHLASAGIEG RVISGHGNVGYGRGHNLAIDLVPADFHLILNPDIDLAPDALSEALAFLDGHPEVGLLSPYVAGADGAMQYLCRRRPTVLS LFVRGFLPQRLRAPFAALLADYEMRDVIDGEHVRLDPPIVSGCFMLFRTSVLRRLGGFDPRYFLYFEDYDLSLRTHEVAR IAYVPAVRTTHYGGHAARKGWLHVKLFGASAVRFFNRFGWRLW
Sequences:
>Translated_283_residues MHDFDASRPGRDRLVVSIVAYRPDVPVLTHTIERLAGAVAHARARRGALPVTVLLIDNGGLDAAAGADLLRHLASAGIEG RVISGHGNVGYGRGHNLAIDLVPADFHLILNPDIDLAPDALSEALAFLDGHPEVGLLSPYVAGADGAMQYLCRRRPTVLS LFVRGFLPQRLRAPFAALLADYEMRDVIDGEHVRLDPPIVSGCFMLFRTSVLRRLGGFDPRYFLYFEDYDLSLRTHEVAR IAYVPAVRTTHYGGHAARKGWLHVKLFGASAVRFFNRFGWRLW >Mature_283_residues MHDFDASRPGRDRLVVSIVAYRPDVPVLTHTIERLAGAVAHARARRGALPVTVLLIDNGGLDAAAGADLLRHLASAGIEG RVISGHGNVGYGRGHNLAIDLVPADFHLILNPDIDLAPDALSEALAFLDGHPEVGLLSPYVAGADGAMQYLCRRRPTVLS LFVRGFLPQRLRAPFAALLADYEMRDVIDGEHVRLDPPIVSGCFMLFRTSVLRRLGGFDPRYFLYFEDYDLSLRTHEVAR IAYVPAVRTTHYGGHAARKGWLHVKLFGASAVRFFNRFGWRLW
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 31237; Mature: 31237
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDFDASRPGRDRLVVSIVAYRPDVPVLTHTIERLAGAVAHARARRGALPVTVLLIDNGG CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC LDAAAGADLLRHLASAGIEGRVISGHGNVGYGRGHNLAIDLVPADFHLILNPDIDLAPDA CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHH LSEALAFLDGHPEVGLLSPYVAGADGAMQYLCRRRPTVLSLFVRGFLPQRLRAPFAALLA HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHCHHHHHHH DYEMRDVIDGEHVRLDPPIVSGCFMLFRTSVLRRLGGFDPRYFLYFEDYDLSLRTHEVAR CCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHEE IAYVPAVRTTHYGGHAARKGWLHVKLFGASAVRFFNRFGWRLW EEEECCEEEECCCCHHHCCCEEEEEEECHHHHHHHHHCCCCCC >Mature Secondary Structure MHDFDASRPGRDRLVVSIVAYRPDVPVLTHTIERLAGAVAHARARRGALPVTVLLIDNGG CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC LDAAAGADLLRHLASAGIEGRVISGHGNVGYGRGHNLAIDLVPADFHLILNPDIDLAPDA CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHH LSEALAFLDGHPEVGLLSPYVAGADGAMQYLCRRRPTVLSLFVRGFLPQRLRAPFAALLA HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHCHHHHHHH DYEMRDVIDGEHVRLDPPIVSGCFMLFRTSVLRRLGGFDPRYFLYFEDYDLSLRTHEVAR CCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHEE IAYVPAVRTTHYGGHAARKGWLHVKLFGASAVRFFNRFGWRLW EEEECCEEEECCCCHHHCCCEEEEEEECHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]