| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is apaH [H]
Identifier: 238026390
GI number: 238026390
Start: 783125
End: 783976
Strand: Reverse
Name: apaH [H]
Synonym: bglu_1g07250
Alternate gene names: 238026390
Gene position: 783976-783125 (Counterclockwise)
Preceding gene: 238026396
Following gene: 238026381
Centisome position: 20.07
GC content: 72.18
Gene sequence:
>852_bases ATGACCCAAGCACCCGGCCCGTCCGTTCCGATCGCGTTCGGCGACCTTCAGGGTTGTCACGCGCCGTTTCGTCAATTGCT GTCCCGCCTGTCCCCGTCGGCCGACCGGCCGCTCTGGTTCGCGGGAGATCTGGTCAACCGCGGCCCCGCCTCGCTCGCCA CGCTGCGCGAGGTGATCGCGCTCGGCGAGCGCCGCGTGGCCGTGCTCGGCAATCACGACCTGCACCTGCTGGCGGTCTCG GCCGGCATCCGGCAACTCAAGCCCGGCGACACGATCGGCGAGATCCTCGAGGCGCCCGACGCGCCGGACCTGCTCGACTG GGTCCGCCGCCGGCCGTTCGTCCACTTCGAGGGCGGCAAGCTGATGCTGCACGCGGGCCTGCTGCCGCAATGGGATCTGA CGCTCACGCTCGAACTCGCCGACGAGCTGCAGTGCGCGCTGCAGGCACCGGACTGGCGCGACACGCTGCGGGCGCTGTAT GGCAACGAGCCCAACCAGTGGCGCGACGGCCTGACCAAGACCGAACGCCTGCGCGTGGCGTTCAACGCGTTCACGCGGCT GCGCTTCTGCACGCCGGACGGCGCCATGGAGTTCCGCGCCAACGGCGGCCCCGACGCGGCGCCGGACGGCCATCTGCCGT GGTTCGAGGCGCCCGGGCGGCGCAGCGCCGAGCTGACCGTGGTGTTCGGCCACTGGGCCGCGCTCGGGCTGATGCTGCGC GACAACCTGGTCGCGCTCGATTCGGGTTGCGTGTGGGGAAACCGCTTGTCGGCCGTCGAACTCGCCGACGAGCCGGCCGC ACGCCGCGTCACGCAGGTGGGCTGCGAGGGCTGCGGCGCCGGCGGAGACTGA
Upstream 100 bases:
>100_bases GCCAGTTCGGCGCTCGCCCGTCCCCCCAGGGATGGGCGGATCAAGCTGTGTTACCGTGTGCCGCAGTTCGTGAAGCAACG TCAAATCACACCTCACGCCA
Downstream 100 bases:
>100_bases GCGGACGGCGCGGTCCGCCACCGCGGCAGCGTCAGGCGCCGCCGCCGGCCCCGCCGCCTTCAGGCATCATGGCGTGCGGC GGGCTCGGCTTCGACGCGGG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTQAPGPSVPIAFGDLQGCHAPFRQLLSRLSPSADRPLWFAGDLVNRGPASLATLREVIALGERRVAVLGNHDLHLLAVS AGIRQLKPGDTIGEILEAPDAPDLLDWVRRRPFVHFEGGKLMLHAGLLPQWDLTLTLELADELQCALQAPDWRDTLRALY GNEPNQWRDGLTKTERLRVAFNAFTRLRFCTPDGAMEFRANGGPDAAPDGHLPWFEAPGRRSAELTVVFGHWAALGLMLR DNLVALDSGCVWGNRLSAVELADEPAARRVTQVGCEGCGAGGD
Sequences:
>Translated_283_residues MTQAPGPSVPIAFGDLQGCHAPFRQLLSRLSPSADRPLWFAGDLVNRGPASLATLREVIALGERRVAVLGNHDLHLLAVS AGIRQLKPGDTIGEILEAPDAPDLLDWVRRRPFVHFEGGKLMLHAGLLPQWDLTLTLELADELQCALQAPDWRDTLRALY GNEPNQWRDGLTKTERLRVAFNAFTRLRFCTPDGAMEFRANGGPDAAPDGHLPWFEAPGRRSAELTVVFGHWAALGLMLR DNLVALDSGCVWGNRLSAVELADEPAARRVTQVGCEGCGAGGD >Mature_282_residues TQAPGPSVPIAFGDLQGCHAPFRQLLSRLSPSADRPLWFAGDLVNRGPASLATLREVIALGERRVAVLGNHDLHLLAVSA GIRQLKPGDTIGEILEAPDAPDLLDWVRRRPFVHFEGGKLMLHAGLLPQWDLTLTLELADELQCALQAPDWRDTLRALYG NEPNQWRDGLTKTERLRVAFNAFTRLRFCTPDGAMEFRANGGPDAAPDGHLPWFEAPGRRSAELTVVFGHWAALGLMLRD NLVALDSGCVWGNRLSAVELADEPAARRVTQVGCEGCGAGGD
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=257, Percent_Identity=43.9688715953307, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 30789; Mature: 30658
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAPGPSVPIAFGDLQGCHAPFRQLLSRLSPSADRPLWFAGDLVNRGPASLATLREVIA CCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH LGERRVAVLGNHDLHLLAVSAGIRQLKPGDTIGEILEAPDAPDLLDWVRRRPFVHFEGGK CCCCEEEEECCCCEEEEEEECCHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCEEEECCCE LMLHAGLLPQWDLTLTLELADELQCALQAPDWRDTLRALYGNEPNQWRDGLTKTERLRVA EEEEECCCCCCCEEEEEEEHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHH FNAFTRLRFCTPDGAMEFRANGGPDAAPDGHLPWFEAPGRRSAELTVVFGHWAALGLMLR HHHHHEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHH DNLVALDSGCVWGNRLSAVELADEPAARRVTQVGCEGCGAGGD CCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQAPGPSVPIAFGDLQGCHAPFRQLLSRLSPSADRPLWFAGDLVNRGPASLATLREVIA CCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH LGERRVAVLGNHDLHLLAVSAGIRQLKPGDTIGEILEAPDAPDLLDWVRRRPFVHFEGGK CCCCEEEEECCCCEEEEEEECCHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCEEEECCCE LMLHAGLLPQWDLTLTLELADELQCALQAPDWRDTLRALYGNEPNQWRDGLTKTERLRVA EEEEECCCCCCCEEEEEEEHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHH FNAFTRLRFCTPDGAMEFRANGGPDAAPDGHLPWFEAPGRRSAELTVVFGHWAALGLMLR HHHHHEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHH DNLVALDSGCVWGNRLSAVELADEPAARRVTQVGCEGCGAGGD CCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA