| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is groL [H]
Identifier: 238026380
GI number: 238026380
Start: 773286
End: 774926
Strand: Direct
Name: groL [H]
Synonym: bglu_1g07150
Alternate gene names: 238026380
Gene position: 773286-774926 (Clockwise)
Preceding gene: 238026379
Following gene: 238026382
Centisome position: 19.79
GC content: 64.17
Gene sequence:
>1641_bases ATGGCAGCTAAAGACGTCGTGTTCGGCGATTCCGCCCGTTCCAAGATGGTTGAAGGCGTGAACATTCTCGCCAATGCAGT GAAGGTCACGCTGGGTCCGAAGGGCCGCAACGTGGTGCTCGAGCGTTCGTTCGGCGGCCCGACGGTCACCAAGGACGGCG TGTCGGTCGCCAAGGAAATCGAGCTGAAGGACAAGCTCCAGAACATGGGCGCGCAAATGGTCAAGGAAGTGGCTTCCAAG ACCAGCGACAACGCAGGCGACGGCACGACGACGGCAACCGTCCTCGCGCAATCGATCGTCCGCGAAGGCATGAAGTACGT CGCATCGGGCATGAACCCGATGGACCTCAAGCGCGGCATCGACAAGGCCGTCACCGCTGCCGTGGAAGAGCTGAAGAAGA TCAGCAAGCCCTGCACGACCAACAAGGAAATCGCCCAGGTCGGCGCGATCTCGGCGAACAGCGACGCATCGATCGGTGAC CGCATCGCCGAGGCGATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTCGAAGACGGCAAGTCGCTGGCCGACGAACT CGATGTCGTCGAAGGCATGCAATTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCGGACAAGCAAGTCGCCG TCCTCGAAAACCCGTTCGTGCTGCTGCACGACAAGAAGGTGTCGAACATCCGTGATCTGCTGCCGGTGCTGGAGCAGGTC GCGAAGGCCGGCCGTCCGCTGCTGATCATCGCCGAAGACGTCGAAGGCGAAGCGCTGGCCACGCTGGTGGTCAACAACAT CCGCGGCATCCTGAAGACCGTCGCCGTCAAGGCACCGGGCTTCGGCGACCGTCGCAAGGCGATGCTGGAAGACATCGCGA TCCTGACGGGCGGTCAGGTCATCGCCGAGGAAACCGGCCTCACGCTCGAGAAGGCGACGCTGGCCGAACTGGGCCAAGCC AAGCGCATCGAAGTGGGCAAGGAAAACACGACGATCATCGATGGCGCCGGCGAAGCCGTCAACATCGAAGCGCGTGTCAA GCAGATCCGCACGCAGATCGAGGAAGCGACCTCGGACTACGACCGCGAAAAGCTGCAAGAGCGCGTGGCGAAGCTGGCCG GCGGCGTGGCGGTGATCAAGGTCGGCGCTGCGACCGAAGTGGAAATGAAGGAAAAGAAGGCACGCGTCGAAGATGCGCTG CACGCCACGCGTGCCGCCGTTGAAGAAGGCATCGTGCCGGGCGGCGGCGTCGCGCTGATCCGCGCTCGCACCGCGATCGC TGGCCTCGTCGGCATCAACGCCGACCAGAACGCCGGCATCAAGATCGTGCTGCGCGCGATGGAAGAGCCGCTGCGCCAGA TCGTCACGAACGGCGGCGAAGAAGCGAGCGTCGTGGTCGCGGCGGTGGCTGCCGGCCAAGGCAACTACGGCTACAACGCG GCGACGGGCGAGTACGTCGACATGGTCGAAGCCGGCGTGGTCGATCCGACGAAGGTCACGCGCACCGCGCTGCAGAACGC TGCTTCGGTCGCCGGCCTGCTGCTGACGACGGATGCCGCCGTTGCCGAACTGCCGAAGGAAGACGCACCGATGCCGGGCG GCATGCCGGGCGGCATGGGCGGCATGGGCATGGACATGTAA
Upstream 100 bases:
>100_bases GGAGCTGCTGGTGATGCGCGAAGAAGACATCATGGCCGTGGTCAACGCGAACTGAGCGTTTGCGCCAGTATCCATTCCCA AGCATTCAAGGAGTTAGAAG
Downstream 100 bases:
>100_bases TCGACTTCGGTCGATTGCATCGGCGGGGCGCGCAGCGATGCGCGTCCCGTCTGCCAAAAAAAACCCGCAAGCGATTGCGG GTTTTTTGTCGTTTGCGGCC
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein; Protein Cpn60 [H]
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MAAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVTAAVEELKKISKPCTTNKEIAQVGAISANSDASIGD RIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQA KRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVPGGGVALIRARTAIAGLVGINADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNA ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM
Sequences:
>Translated_546_residues MAAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVTAAVEELKKISKPCTTNKEIAQVGAISANSDASIGD RIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQA KRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVPGGGVALIRARTAIAGLVGINADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNA ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM >Mature_545_residues AAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKT SDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVTAAVEELKKISKPCTTNKEIAQVGAISANSDASIGDR IAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVA KAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAK RIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH ATRAAVEEGIVPGGGVALIRARTAIAGLVGINADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNAA TGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=528, Percent_Identity=53.4090909090909, Blast_Score=543, Evalue=1e-154, Organism=Homo sapiens, GI31542947, Length=528, Percent_Identity=53.4090909090909, Blast_Score=543, Evalue=1e-154, Organism=Homo sapiens, GI24307939, Length=382, Percent_Identity=23.5602094240838, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI5453607, Length=553, Percent_Identity=22.9656419529837, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1790586, Length=529, Percent_Identity=76.1814744801512, Blast_Score=797, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=529, Percent_Identity=52.930056710775, Blast_Score=550, Evalue=1e-157, Organism=Caenorhabditis elegans, GI193210679, Length=218, Percent_Identity=51.8348623853211, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI25144674, Length=548, Percent_Identity=22.0802919708029, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=52.2813688212928, Blast_Score=537, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6322446, Length=565, Percent_Identity=22.1238938053097, Blast_Score=77, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6322524, Length=574, Percent_Identity=21.9512195121951, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322350, Length=567, Percent_Identity=22.5749559082892, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24641193, Length=527, Percent_Identity=52.1821631878558, Blast_Score=553, Evalue=1e-157, Organism=Drosophila melanogaster, GI24641191, Length=527, Percent_Identity=52.1821631878558, Blast_Score=553, Evalue=1e-157, Organism=Drosophila melanogaster, GI45550936, Length=527, Percent_Identity=50.4743833017078, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI45550132, Length=527, Percent_Identity=50.4743833017078, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI45550935, Length=527, Percent_Identity=50.4743833017078, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI17864606, Length=550, Percent_Identity=43.8181818181818, Blast_Score=456, Evalue=1e-128, Organism=Drosophila melanogaster, GI24584129, Length=532, Percent_Identity=37.218045112782, Blast_Score=330, Evalue=1e-90, Organism=Drosophila melanogaster, GI19921262, Length=532, Percent_Identity=37.218045112782, Blast_Score=330, Evalue=1e-90, Organism=Drosophila melanogaster, GI17647245, Length=503, Percent_Identity=23.4592445328032, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 57158; Mature: 57027
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVTAAVEELKKISKPCTTNKEIAQVGAISANSDASIGDRIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC KSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV CHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDY EECCCCCEEHHHHHHHCCCCCEEECCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH RARTAIAGLVGINADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC GMGMDM CCCCCC >Mature Secondary Structure AAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVTAAVEELKKISKPCTTNKEIAQVGAISANSDASIGDRIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC KSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV CHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDY EECCCCCEEHHHHHHHCCCCCEEECCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH RARTAIAGLVGINADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC GMGMDM CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA