| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yfkF [H]
Identifier: 238026359
GI number: 238026359
Start: 745577
End: 746758
Strand: Reverse
Name: yfkF [H]
Synonym: bglu_1g06930
Alternate gene names: 238026359
Gene position: 746758-745577 (Counterclockwise)
Preceding gene: 238026360
Following gene: 238026357
Centisome position: 19.12
GC content: 72.67
Gene sequence:
>1182_bases ATGAAAGCGATCCTCAACCGTGATTTCCTCGCACTGATCCTGAGCGTCGCGGTGGTCGGCCTGGGCACCGGCGCGACCCT GCCGCTCACGGCCCTCGCGCTGACCGAGGCCGGTCACGGCACCGGCGTGGTCGGCATACTGACCGCCGCGCAGGCAGGCG GCGGCCTCGCGGTCGTGCCGTTCGTCACGCGCCTCACGCAGCGCTACGGCGCGCGCGAATCGATCGTCGCATCGGTGCTG ATCGTGGCCGCGGCCACCGCCGCGATGCAGGTCACCTCGGATCTCGCCGTCTGGGGCCTGTTGCGCGCACTCTGCGGCGC CGCGCTGATGCTGCTGTTTACGATCGGCGAGGCCTGGGTCAACGAGCTCGCCGACGACGCCACGCGCGGCCGCGTGGTGG CGATCTACGCCACCAATTTCACGTTGTTCCAGATGGCCGGGCCGGCGCTCGTCAGCGAGATCGCCGGGCTGCACGGCATC CGCTTCGCGCTGTGCGGCGCGCTGTTCCTGCTCGGGCTGCCGACGCTGGCGGCGATTCGCAAGCCGCCCGGCGCGGCTGC CGGCCGGCACGGCGAGCACGACGGCGCGTCGCGCGCGCAGTGGCGCCGCGTGCTGCCGCGGATGCCGGCGCTGATCATCG GCACCGCGTTCTTCGCGCTGTTCGACACGCTCGCGCTGTCGCTGCTGCCGATCTACGCGATCGAGCGCGGCGTGGCGAGC GGCATCGCGGTACTGCTCGCGTCGGTGACGCTGCTCGGCGACACCGCCATGCAGTTCCCGATCGGCTGGCTCGCCGACAA GCTCGGCCGCGCGCGCGTCCACCTGGGTGCGGGCATCGTCGTCACGCTGCTGCTGCCGCTGCTGCCGCTCGTGATCACCA ACCCGTGGCTCTGCTGGCCGCTGCTGTTCGTGATCGGCGCGGCGGCGGGCAGCACCTACACGCTGTCGATCGTCGCCTGC GGCGAACGCTTCCGCGGCGCCGCGCTGGTCACCGCGAGCTCGCTCGTGTCGGCCTCGTGGAGCGTCGCGAGCTTCGCCGG CCCGGCCGTCGCCGGCTCGCTGATGAACGCCTGGGGCGACGACGCGCTGGTGGGCGTGATGGTGGCCACCTCGCTGATGT TCGTGATCGCCGCGTGGTGGGAACGCCGGCGCCTGCCGGCGGCGGCCGCACGCGAGGTCTGA
Upstream 100 bases:
>100_bases CACGGCAAAACCGTCAACATGCCGCACGCGCATGCCGATTCGCTCGCGCGCGGCGCTGCCTCATGGCTCGAACCGCAGGG CCGGTGTAGCATCTCGGCCG
Downstream 100 bases:
>100_bases AGCGGGCGCCAATCACCGGCCGCGTCGCCGTTCGAGCCCGATTCGCATCTCACACCGTGCGCCGCGCCTGGCCATCGGCC GGCCGCGTGGCCAGGCCGAG
Product: MFS-family membrane transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKAILNRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTGVVGILTAAQAGGGLAVVPFVTRLTQRYGARESIVASVL IVAAATAAMQVTSDLAVWGLLRALCGAALMLLFTIGEAWVNELADDATRGRVVAIYATNFTLFQMAGPALVSEIAGLHGI RFALCGALFLLGLPTLAAIRKPPGAAAGRHGEHDGASRAQWRRVLPRMPALIIGTAFFALFDTLALSLLPIYAIERGVAS GIAVLLASVTLLGDTAMQFPIGWLADKLGRARVHLGAGIVVTLLLPLLPLVITNPWLCWPLLFVIGAAAGSTYTLSIVAC GERFRGAALVTASSLVSASWSVASFAGPAVAGSLMNAWGDDALVGVMVATSLMFVIAAWWERRRLPAAAAREV
Sequences:
>Translated_393_residues MKAILNRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTGVVGILTAAQAGGGLAVVPFVTRLTQRYGARESIVASVL IVAAATAAMQVTSDLAVWGLLRALCGAALMLLFTIGEAWVNELADDATRGRVVAIYATNFTLFQMAGPALVSEIAGLHGI RFALCGALFLLGLPTLAAIRKPPGAAAGRHGEHDGASRAQWRRVLPRMPALIIGTAFFALFDTLALSLLPIYAIERGVAS GIAVLLASVTLLGDTAMQFPIGWLADKLGRARVHLGAGIVVTLLLPLLPLVITNPWLCWPLLFVIGAAAGSTYTLSIVAC GERFRGAALVTASSLVSASWSVASFAGPAVAGSLMNAWGDDALVGVMVATSLMFVIAAWWERRRLPAAAAREV >Mature_393_residues MKAILNRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTGVVGILTAAQAGGGLAVVPFVTRLTQRYGARESIVASVL IVAAATAAMQVTSDLAVWGLLRALCGAALMLLFTIGEAWVNELADDATRGRVVAIYATNFTLFQMAGPALVSEIAGLHGI RFALCGALFLLGLPTLAAIRKPPGAAAGRHGEHDGASRAQWRRVLPRMPALIIGTAFFALFDTLALSLLPIYAIERGVAS GIAVLLASVTLLGDTAMQFPIGWLADKLGRARVHLGAGIVVTLLLPLLPLVITNPWLCWPLLFVIGAAAGSTYTLSIVAC GERFRGAALVTASSLVSASWSVASFAGPAVAGSLMNAWGDDALVGVMVATSLMFVIAAWWERRRLPAAAAREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40649; Mature: 40649
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAILNRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTGVVGILTAAQAGGGLAVVP CCCHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEHHH FVTRLTQRYGARESIVASVLIVAAATAAMQVTSDLAVWGLLRALCGAALMLLFTIGEAWV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELADDATRGRVVAIYATNFTLFQMAGPALVSEIAGLHGIRFALCGALFLLGLPTLAAIR HHHHHHHHCCEEEEEEECCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPPGAAAGRHGEHDGASRAQWRRVLPRMPALIIGTAFFALFDTLALSLLPIYAIERGVAS CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAVLLASVTLLGDTAMQFPIGWLADKLGRARVHLGAGIVVTLLLPLLPLVITNPWLCWP HHHHHHHHHHHHCCHHHHCCHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH LLFVIGAAAGSTYTLSIVACGERFRGAALVTASSLVSASWSVASFAGPAVAGSLMNAWGD HHHHHHHCCCCEEEEEEEECCCHHCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCC DALVGVMVATSLMFVIAAWWERRRLPAAAAREV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MKAILNRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTGVVGILTAAQAGGGLAVVP CCCHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEHHH FVTRLTQRYGARESIVASVLIVAAATAAMQVTSDLAVWGLLRALCGAALMLLFTIGEAWV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELADDATRGRVVAIYATNFTLFQMAGPALVSEIAGLHGIRFALCGALFLLGLPTLAAIR HHHHHHHHCCEEEEEEECCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPPGAAAGRHGEHDGASRAQWRRVLPRMPALIIGTAFFALFDTLALSLLPIYAIERGVAS CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAVLLASVTLLGDTAMQFPIGWLADKLGRARVHLGAGIVVTLLLPLLPLVITNPWLCWP HHHHHHHHHHHHCCHHHHCCHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH LLFVIGAAAGSTYTLSIVACGERFRGAALVTASSLVSASWSVASFAGPAVAGSLMNAWGD HHHHHHHCCCCEEEEEEEECCCHHCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCC DALVGVMVATSLMFVIAAWWERRRLPAAAAREV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]