| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026357
Identifier: 238026357
GI number: 238026357
Start: 742998
End: 743804
Strand: Reverse
Name: 238026357
Synonym: bglu_1g06910
Alternate gene names: NA
Gene position: 743804-742998 (Counterclockwise)
Preceding gene: 238026359
Following gene: 238026355
Centisome position: 19.04
GC content: 66.67
Gene sequence:
>807_bases ATGATCCCGCCCACCATTCCCGAACTGGTCGACCGAGCCAGCCAGTTGCCCTACCTGCGCGAACATCTCGCGCTGGCGCC GGGCGGCGACACCGCGATCGCCAGCCTGCCGGGACTGACACTCGAAAGCGTCTACGAGCCGATCTACGACGTGACGATGC CCGGCGCGCCGCAATCTTCGTCGTTCGCCGACGCGATCGAGCGCTATGGCGACGAACTCGGTTTCCAGGCCGTGCTGCGC GCGAGCGGCGCGCCGTACGATCCGTTCGACGCGATCGCCGACGACCCGACGCTGGTGGCCGTCGATCGCCTTTCGCGCGC GCTGCACGCGATCAACTTCTTCGGGCCGCAGCGCCACGGGTTGCTGTTCCTGCGCGTTCACGAGCGGCTGCTCAAAAGCG TGAAGTACGATCATGGCAAGCATTTCTCGACGGTGCTGCGCAGCTTCGGGCTGAGCCCCGAGCGCATCGTGATCGAGCTG CCGGCCGCCGCCGTCGCTCACAAGACGTTCCTCGGCTACCTGACCAGGAGCTACCAGCACCACGGCTTCAAGGTGGCCGA CAAGCTGCCCGATCCGGGCCGGATTCTCGCGGTCGAGTCGGACATGGCGCGCCCGGACTACATCAAGATGGATGCGGCGA TCGCCTTGCGCGACGGGATGGTCAAGGCGCTGGTCGGCTATGCGCAGCGCGTGCGGATTCCGATCATCTTCGATCACGTG ATCGACGAGGCCCAATTCCTGCTGCTGCGCCAGTACGACGTGCGGCTCATGCAGGGGCCGGCCTTCACCCAGCCCGCGCC GGTCTGA
Upstream 100 bases:
>100_bases TATCGATATCAGCAAAACGCCGAACCGCACGAATCGGGCGCTGCTACTATCCTTGAAGACATCGCGCCGCGTCGCGGCCG TTCGCCCACTCGACGAATCC
Downstream 100 bases:
>100_bases CGCCGCGCGGCCGGGTTGGCGCGCGGCACACCGCCGGCACCGGCGCGCAGGCCGCCGCGCGCTAGGCGAGCTCGCCGAGC CGGCGCGCGAGCGCGCGCAA
Product: EAL domain-containing protein
Products: NA
Alternate protein names: EAL Domain-Containing Protein; Signalling Protein EAL; Sensory Transduction Protein Kinase; EAL Domain Protein; Signal Transduction Protein Eal Domain; Signaling Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MIPPTIPELVDRASQLPYLREHLALAPGGDTAIASLPGLTLESVYEPIYDVTMPGAPQSSSFADAIERYGDELGFQAVLR ASGAPYDPFDAIADDPTLVAVDRLSRALHAINFFGPQRHGLLFLRVHERLLKSVKYDHGKHFSTVLRSFGLSPERIVIEL PAAAVAHKTFLGYLTRSYQHHGFKVADKLPDPGRILAVESDMARPDYIKMDAAIALRDGMVKALVGYAQRVRIPIIFDHV IDEAQFLLLRQYDVRLMQGPAFTQPAPV
Sequences:
>Translated_268_residues MIPPTIPELVDRASQLPYLREHLALAPGGDTAIASLPGLTLESVYEPIYDVTMPGAPQSSSFADAIERYGDELGFQAVLR ASGAPYDPFDAIADDPTLVAVDRLSRALHAINFFGPQRHGLLFLRVHERLLKSVKYDHGKHFSTVLRSFGLSPERIVIEL PAAAVAHKTFLGYLTRSYQHHGFKVADKLPDPGRILAVESDMARPDYIKMDAAIALRDGMVKALVGYAQRVRIPIIFDHV IDEAQFLLLRQYDVRLMQGPAFTQPAPV >Mature_268_residues MIPPTIPELVDRASQLPYLREHLALAPGGDTAIASLPGLTLESVYEPIYDVTMPGAPQSSSFADAIERYGDELGFQAVLR ASGAPYDPFDAIADDPTLVAVDRLSRALHAINFFGPQRHGLLFLRVHERLLKSVKYDHGKHFSTVLRSFGLSPERIVIEL PAAAVAHKTFLGYLTRSYQHHGFKVADKLPDPGRILAVESDMARPDYIKMDAAIALRDGMVKALVGYAQRVRIPIIFDHV IDEAQFLLLRQYDVRLMQGPAFTQPAPV
Specific function: Unknown
COG id: COG2200
COG function: function code T; FOG: EAL domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29637; Mature: 29637
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPTIPELVDRASQLPYLREHLALAPGGDTAIASLPGLTLESVYEPIYDVTMPGAPQSS CCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCC SFADAIERYGDELGFQAVLRASGAPYDPFDAIADDPTLVAVDRLSRALHAINFFGPQRHG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC LLFLRVHERLLKSVKYDHGKHFSTVLRSFGLSPERIVIELPAAAVAHKTFLGYLTRSYQH EEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC HGFKVADKLPDPGRILAVESDMARPDYIKMDAAIALRDGMVKALVGYAQRVRIPIIFDHV CCEEECCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IDEAQFLLLRQYDVRLMQGPAFTQPAPV HHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIPPTIPELVDRASQLPYLREHLALAPGGDTAIASLPGLTLESVYEPIYDVTMPGAPQSS CCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCC SFADAIERYGDELGFQAVLRASGAPYDPFDAIADDPTLVAVDRLSRALHAINFFGPQRHG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC LLFLRVHERLLKSVKYDHGKHFSTVLRSFGLSPERIVIELPAAAVAHKTFLGYLTRSYQH EEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC HGFKVADKLPDPGRILAVESDMARPDYIKMDAAIALRDGMVKALVGYAQRVRIPIIFDHV CCEEECCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IDEAQFLLLRQYDVRLMQGPAFTQPAPV HHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA