| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238026324
Identifier: 238026324
GI number: 238026324
Start: 707701
End: 708966
Strand: Reverse
Name: 238026324
Synonym: bglu_1g06580
Alternate gene names: NA
Gene position: 708966-707701 (Counterclockwise)
Preceding gene: 238026325
Following gene: 238026317
Centisome position: 18.15
GC content: 68.01
Gene sequence:
>1266_bases ATGCCAGGCCTGAAGAATTGGCGCGCAGCACTACTGCAGCATGCCGCAACCCGGTGGGGCCTCCCCCTGGCGGGCGCAGC GCGCAAGGCGATCGCCACGCTGCGTTCCGAAGCCGCCCGCCAAGCATCGCGACAACCGCGTCAACTCCTGGTCGACGTCT CGATCATCGCCGCACAAGATGCGGGAACCGGCATTCAGCGCGTGGTCCGCTCGCTGCTGGCCGAACTGCTGGAGACACCG CCCGCCGGCTATACGGTCCGCGCGATCCGGGCAACCCGCAAACGCCCGTATGTCTATGCTGACCGCTACCTGGAGACGAT GACCGGCGCCCCCATCGGCGACGACGATCCCCCCGTCCAAGTCCGTCCTGGCGATTTATTCCTCGGCCTCGACCTGACCA GCCGCATCTCGCCGGCCAGGCAAGCGGATTTCCTGGGCTGGCACGCGGCGGGGGTGCGCTTCGCCTTCGTCGTCTACGAC ATGTTGCCGGCCTTGCACCCGGCCTGGTTTACGCCACGCGCGGTCCAGTCGTTCGAACGCTGGCTGACGATGCTGGCAAT CCACGCGGACGCCCTGTTCTGCATCTCGGCCACGGTGGCCGAACAAACGCGGCGCCAACCGCGATTGGCGGCGATTCCCA CCGGATGGTTTCACCTCGGTGCCGAACTCGCCGCAAGACAGGGCGCCGGGCAGGCGACGGCGGACGACATCACGCCGTGC CCTGCCGGAGCGCCGCGCATTCTGATGGTCGGGACCATCGAACCTCGCAAGGGACATGCGCTGGTCATCGATGCATTCGA GCGGTTGTGGCGCGACGGTTGCCAGGCCTCGCTGTCGATCGTCGGCCGCGCCGGCTGGGCCGTCGAGGCGCTGACCGCCA GACTCGCGGCGCATCCCGAATCCGGCAAGCGACTGCACTGGCTGGCGGGCGCCGGCGACGCCGAGCTTGCCCGGCTCTAC GAAAGCAGCGATGGATTGATTCTGGCCTCCGAGGGCGAAGGCTTCGGTCTGCCGATCATCGAGGCCGCCGCCCAGCGCCT GCCGCTACTCCTGCGCGATCTACCGGTATTCCGCGAGATCGCCGGCGACCACGCCAGCTACTTCTCCTCGGTTACGGCGG CCGAACTGGCGCCGCGCCTGCAGCAATGGCTCGAGGCGATCGCTGCCGGCACCGCGCCCGACAGCGGGGCGATCAAGACA CTGAGCTGGCATGAAAGCGCGATACAGCTGAAGTCGCTGATCAGCCGGCTCGACGCACGGTCATGA
Upstream 100 bases:
>100_bases TCGCGCCGCCGTGCTGGTCCAGGGCCACCTGCACAGCTTCGACGAGGTCGATGACGCCTACGCGTTCTATCAGCAGAATG GCTGACGTTTTCCGCGCTCC
Downstream 100 bases:
>100_bases CTGCGCTACCCGGCGATAGGTTTCAAGCGTGCGCTGCGCGCATCGCCGCCAGGTCGCCGCGCCGGCCACGCGGAGCCCGA GACGCGATGCCTCGTCGCGC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase A; Glycosyltransferase WbpX; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Glycosyl Transferase Protein; Glycosyl Transferase Group 1 Protein; Bifunctional Glycosyltransferase
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MPGLKNWRAALLQHAATRWGLPLAGAARKAIATLRSEAARQASRQPRQLLVDVSIIAAQDAGTGIQRVVRSLLAELLETP PAGYTVRAIRATRKRPYVYADRYLETMTGAPIGDDDPPVQVRPGDLFLGLDLTSRISPARQADFLGWHAAGVRFAFVVYD MLPALHPAWFTPRAVQSFERWLTMLAIHADALFCISATVAEQTRRQPRLAAIPTGWFHLGAELAARQGAGQATADDITPC PAGAPRILMVGTIEPRKGHALVIDAFERLWRDGCQASLSIVGRAGWAVEALTARLAAHPESGKRLHWLAGAGDAELARLY ESSDGLILASEGEGFGLPIIEAAAQRLPLLLRDLPVFREIAGDHASYFSSVTAAELAPRLQQWLEAIAAGTAPDSGAIKT LSWHESAIQLKSLISRLDARS
Sequences:
>Translated_421_residues MPGLKNWRAALLQHAATRWGLPLAGAARKAIATLRSEAARQASRQPRQLLVDVSIIAAQDAGTGIQRVVRSLLAELLETP PAGYTVRAIRATRKRPYVYADRYLETMTGAPIGDDDPPVQVRPGDLFLGLDLTSRISPARQADFLGWHAAGVRFAFVVYD MLPALHPAWFTPRAVQSFERWLTMLAIHADALFCISATVAEQTRRQPRLAAIPTGWFHLGAELAARQGAGQATADDITPC PAGAPRILMVGTIEPRKGHALVIDAFERLWRDGCQASLSIVGRAGWAVEALTARLAAHPESGKRLHWLAGAGDAELARLY ESSDGLILASEGEGFGLPIIEAAAQRLPLLLRDLPVFREIAGDHASYFSSVTAAELAPRLQQWLEAIAAGTAPDSGAIKT LSWHESAIQLKSLISRLDARS >Mature_420_residues PGLKNWRAALLQHAATRWGLPLAGAARKAIATLRSEAARQASRQPRQLLVDVSIIAAQDAGTGIQRVVRSLLAELLETPP AGYTVRAIRATRKRPYVYADRYLETMTGAPIGDDDPPVQVRPGDLFLGLDLTSRISPARQADFLGWHAAGVRFAFVVYDM LPALHPAWFTPRAVQSFERWLTMLAIHADALFCISATVAEQTRRQPRLAAIPTGWFHLGAELAARQGAGQATADDITPCP AGAPRILMVGTIEPRKGHALVIDAFERLWRDGCQASLSIVGRAGWAVEALTARLAAHPESGKRLHWLAGAGDAELARLYE SSDGLILASEGEGFGLPIIEAAAQRLPLLLRDLPVFREIAGDHASYFSSVTAAELAPRLQQWLEAIAAGTAPDSGAIKTL SWHESAIQLKSLISRLDARS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45487; Mature: 45355
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLKNWRAALLQHAATRWGLPLAGAARKAIATLRSEAARQASRQPRQLLVDVSIIAAQD CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHEEEECC AGTGIQRVVRSLLAELLETPPAGYTVRAIRATRKRPYVYADRYLETMTGAPIGDDDPPVQ CCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCE VRPGDLFLGLDLTSRISPARQADFLGWHAAGVRFAFVVYDMLPALHPAWFTPRAVQSFER EECCCEEEECCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH WLTMLAIHADALFCISATVAEQTRRQPRLAAIPTGWFHLGAELAARQGAGQATADDITPC HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC PAGAPRILMVGTIEPRKGHALVIDAFERLWRDGCQASLSIVGRAGWAVEALTARLAAHPE CCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCC SGKRLHWLAGAGDAELARLYESSDGLILASEGEGFGLPIIEAAAQRLPLLLRDLPVFREI CCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGDHASYFSSVTAAELAPRLQQWLEAIAAGTAPDSGAIKTLSWHESAIQLKSLISRLDAR HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCC S C >Mature Secondary Structure PGLKNWRAALLQHAATRWGLPLAGAARKAIATLRSEAARQASRQPRQLLVDVSIIAAQD CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHEEEECC AGTGIQRVVRSLLAELLETPPAGYTVRAIRATRKRPYVYADRYLETMTGAPIGDDDPPVQ CCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCE VRPGDLFLGLDLTSRISPARQADFLGWHAAGVRFAFVVYDMLPALHPAWFTPRAVQSFER EECCCEEEECCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH WLTMLAIHADALFCISATVAEQTRRQPRLAAIPTGWFHLGAELAARQGAGQATADDITPC HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC PAGAPRILMVGTIEPRKGHALVIDAFERLWRDGCQASLSIVGRAGWAVEALTARLAAHPE CCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCC SGKRLHWLAGAGDAELARLYESSDGLILASEGEGFGLPIIEAAAQRLPLLLRDLPVFREI CCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGDHASYFSSVTAAELAPRLQQWLEAIAAGTAPDSGAIKTLSWHESAIQLKSLISRLDAR HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA