| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026317
Identifier: 238026317
GI number: 238026317
Start: 695780
End: 696937
Strand: Reverse
Name: 238026317
Synonym: bglu_1g06510
Alternate gene names: NA
Gene position: 696937-695780 (Counterclockwise)
Preceding gene: 238026324
Following gene: 238026316
Centisome position: 17.84
GC content: 65.54
Gene sequence:
>1158_bases GTGACACAAATACTCCTTGACGTCACGCGTATCGTCACCCGCCGTTACGATGGCTTGATTCCCACCGGGGTCGACCGGGT CGGCCTGGCCTACGTGCAGAAATATGGCGACCACGCACGCGCGGTTCTCGGCGAGCGGGGCCATTCGATCGTTCTGAGCG AGCGAGATTCCCAACGCCTCTTCGGCCTGCTGCTCTCGACGCCGGGCCCGCGTGACCGCTGGGCGCTGCGCGGCATGGTT GCACGCACGCTGATGGGCGCGTTTAACCGGTCACGCTTCGAACATGCCGTCCTGCTCCATACCAGCCATTCTGGCATGGA GCACACACGCTACTACAGAGCCATGGCCCGCCGCAATGCTCGGCCGGTGTTCATGGTCCACGACCTGATCCCCTTGACGC ACGCGGAGTATTGCCGGCCCGGCGTCGAACAGATGCATCGCCTGCGCATCCGCACGGCATTGCGACACGCGAGCGGACTC ATCGCAAATTCGCAGGCGACGCTGGATTCGATCGAACAGGAGGCGCAGGCGGCTGGCCTGCCGATGCCGCCCTGCACGAT CGCCCGTCTCGCGCCCGGCATCACCGCGCACCAGCCCTGCCCCGCACCGATCGGCGAGCCCTACTTCCTCATGCTGGGCA CCATCGAGCCGCGCAAGAATCATTGGCTGATGCTGCATGTATGGCGCAGCTTGGTCGAGCGCCACGGCGCGCGCGCCCCG AAACTCGTGATCATCGGGCGCCGGGGCTGGGAATGCGAAAACGTCGTCGACATGCTGGAGCGATGCACGCCGCTACGACA GTTCGTCGTGGAGGAGTCGGAATGCAGCGACGAACGCCTGCATGCGCTGCTCCAGCATGCGCGGGCCTTGTTGTTTCCGT CGTTCGTCGAGGGCTACGGCATGCCGCTCGTGGAGGCGCTCGCCTCGCGCATCCCGGTGCTCGCGAGCAATCTCGAGGTG TTTCGCGAAATTGCCGCCGACACGCCGGATTATCTCGATCCGCTCGACGGCCCGGCATGGGCGCAGCGGATCATGGAGTA TGCCGCCCCCGCGAGCCCGGCACGGCAGCAGCAGATGTCGCGCATCGAGCACTTCGGCGCACCGACCTGGAGCGCTCATT TCGCGTGCGTCGACAGCTTCATCGGCACGCTCAATTAG
Upstream 100 bases:
>100_bases CTAGTTTTTTGCAGACTGGGCCGAGTGCCACCGCGCCCGCCGGCACGCCGGTAATAATTGGTGCCGCAACCGCTTGCCAA CATCCATTAACGACATTCGA
Downstream 100 bases:
>100_bases ATGTCCGAATATCCCATCCCGTCGTCCGGATCGCGCGACCGGCAGTTCGACGCGATTTACCTCGCGCATGGCTACCGGCT GCTCGGCTGGCTGACCCGCC
Product: glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; Glycosyltransferase WbpX; Mannosyltransferase A; Glycosyl Transferase Group 1 Family Protein; Bifunctional Glycosyltransferase; Mannosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Glycosyltransferase WbpY; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Glycosyl Transferase Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTQILLDVTRIVTRRYDGLIPTGVDRVGLAYVQKYGDHARAVLGERGHSIVLSERDSQRLFGLLLSTPGPRDRWALRGMV ARTLMGAFNRSRFEHAVLLHTSHSGMEHTRYYRAMARRNARPVFMVHDLIPLTHAEYCRPGVEQMHRLRIRTALRHASGL IANSQATLDSIEQEAQAAGLPMPPCTIARLAPGITAHQPCPAPIGEPYFLMLGTIEPRKNHWLMLHVWRSLVERHGARAP KLVIIGRRGWECENVVDMLERCTPLRQFVVEESECSDERLHALLQHARALLFPSFVEGYGMPLVEALASRIPVLASNLEV FREIAADTPDYLDPLDGPAWAQRIMEYAAPASPARQQQMSRIEHFGAPTWSAHFACVDSFIGTLN
Sequences:
>Translated_385_residues MTQILLDVTRIVTRRYDGLIPTGVDRVGLAYVQKYGDHARAVLGERGHSIVLSERDSQRLFGLLLSTPGPRDRWALRGMV ARTLMGAFNRSRFEHAVLLHTSHSGMEHTRYYRAMARRNARPVFMVHDLIPLTHAEYCRPGVEQMHRLRIRTALRHASGL IANSQATLDSIEQEAQAAGLPMPPCTIARLAPGITAHQPCPAPIGEPYFLMLGTIEPRKNHWLMLHVWRSLVERHGARAP KLVIIGRRGWECENVVDMLERCTPLRQFVVEESECSDERLHALLQHARALLFPSFVEGYGMPLVEALASRIPVLASNLEV FREIAADTPDYLDPLDGPAWAQRIMEYAAPASPARQQQMSRIEHFGAPTWSAHFACVDSFIGTLN >Mature_384_residues TQILLDVTRIVTRRYDGLIPTGVDRVGLAYVQKYGDHARAVLGERGHSIVLSERDSQRLFGLLLSTPGPRDRWALRGMVA RTLMGAFNRSRFEHAVLLHTSHSGMEHTRYYRAMARRNARPVFMVHDLIPLTHAEYCRPGVEQMHRLRIRTALRHASGLI ANSQATLDSIEQEAQAAGLPMPPCTIARLAPGITAHQPCPAPIGEPYFLMLGTIEPRKNHWLMLHVWRSLVERHGARAPK LVIIGRRGWECENVVDMLERCTPLRQFVVEESECSDERLHALLQHARALLFPSFVEGYGMPLVEALASRIPVLASNLEVF REIAADTPDYLDPLDGPAWAQRIMEYAAPASPARQQQMSRIEHFGAPTWSAHFACVDSFIGTLN
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43320; Mature: 43188
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQILLDVTRIVTRRYDGLIPTGVDRVGLAYVQKYGDHARAVLGERGHSIVLSERDSQRL CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH FGLLLSTPGPRDRWALRGMVARTLMGAFNRSRFEHAVLLHTSHSGMEHTRYYRAMARRNA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCC RPVFMVHDLIPLTHAEYCRPGVEQMHRLRIRTALRHASGLIANSQATLDSIEQEAQAAGL CCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC PMPPCTIARLAPGITAHQPCPAPIGEPYFLMLGTIEPRKNHWLMLHVWRSLVERHGARAP CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCCC KLVIIGRRGWECENVVDMLERCTPLRQFVVEESECSDERLHALLQHARALLFPSFVEGYG EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHCC MPLVEALASRIPVLASNLEVFREIAADTPDYLDPLDGPAWAQRIMEYAAPASPARQQQMS CHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH RIEHFGAPTWSAHFACVDSFIGTLN HHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TQILLDVTRIVTRRYDGLIPTGVDRVGLAYVQKYGDHARAVLGERGHSIVLSERDSQRL CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH FGLLLSTPGPRDRWALRGMVARTLMGAFNRSRFEHAVLLHTSHSGMEHTRYYRAMARRNA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCC RPVFMVHDLIPLTHAEYCRPGVEQMHRLRIRTALRHASGLIANSQATLDSIEQEAQAAGL CCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC PMPPCTIARLAPGITAHQPCPAPIGEPYFLMLGTIEPRKNHWLMLHVWRSLVERHGARAP CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCCC KLVIIGRRGWECENVVDMLERCTPLRQFVVEESECSDERLHALLQHARALLFPSFVEGYG EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHCC MPLVEALASRIPVLASNLEVFREIAADTPDYLDPLDGPAWAQRIMEYAAPASPARQQQMS CHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH RIEHFGAPTWSAHFACVDSFIGTLN HHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA