| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238026263
Identifier: 238026263
GI number: 238026263
Start: 625902
End: 628022
Strand: Reverse
Name: 238026263
Synonym: bglu_1g05960
Alternate gene names: NA
Gene position: 628022-625902 (Counterclockwise)
Preceding gene: 238026264
Following gene: 238026262
Centisome position: 16.08
GC content: 72.75
Gene sequence:
>2121_bases ATGTTCCGATCCCTGCCGATCCTCCTGAAGAAATGGCGCGCCTCGCGCAGCGCCAGCCACCAGCTCGACGCGCTGCTCGC GAACGCCGACGCCGACGCGCCCTACGCCGAGCGCAGCGAGTGGCTGATCGAGCTCGCGCACTGGCTGCGCCGCGACGGCA CGCTGCAGACGCCGGGCGCGTCCGACGGCGCCGCCGCCGAGCCGCGCTCGCCCACGGCCACCGCCCACGCGCGGCTGCGC TACGTGCTGCACGTGCTCGACCGCAATCCCGCCTGGAAGACCCACGTCGCACGCATCCTGCGCGCGCTGCTGCGCGAGAC CGACGCCATCTCGCTGCTCTGCGACGCCGGCATGCCGGTCCACTCGGGCTTCTTCGGCGCGCTGTTCGAGCGCATCGACG CGTCGCTGATCCCGCCGGCGCCGAACCGCCGCGAGCTGGCCGCCCTGTTCACGCTGATGTTCCCGGCGCCCGGCGACGGC GCCTGGATCGAGGCGCTGCCCGACGACCTGCTGGCACGCCTGCAGGAGCTGTTCGGCCACGACGTCAGCGAAGCCGAGCG CCACCAGCCCGGCTCGTTCTCGCGCGACCTGCTGGCCGCGCTGCACAACCTGAGCTGCCAGATCAGCTCGACCGGCCTGT CACAGACAGTGCGCAGCCGGCTCGCCGCCGACGACGCGCACCGCCCGATCGACGCGCAGCCGTTCTACCGCCTGATGCGC GCGATGCTGGCGGTGGAGGCCGCGCAGGCGGCCGTCGACGAGGGCGGCGAGCCGGACCGGCTGCTGCACGAGGTCAACTA TCTGCGCGTGCTGCTCGACGAATGCCGCGAATCGGCCGACGACGTCTCGGCCCATCTCTATCGCAACGGCGTGTCGGTCG ACATCGTGTTCCAGGTCGAGCGCATGCGCATGCGGATCCAGCGCGCCGAATCGCTGCTCAACGCCTGGATGGCGCGCGAC GACCGCCGCGGCCTGGCGCGCCTGACCGCCGAGCTGATCGACGCGAACCTGAGCAGCCAGAGCGTCGCGCACCTGGTGCG CAGCAGCACCTCGCTGTTCGCGCGCAAGCTGGTCGAGACCAATGCCGACACCGGCGAGCACTACATCACGCGCGGCCGCG CCGACTACCTGAAGATGATGCGGATGGCCGCCGGCGGCGGGCTCGTCACGGTGGCCACCGTCTGCGTGAAGTTCTGGATC ACCGGCGCCCACCTGCAGGCGATGGTCGAGGGCTTCCTGGCCGGGCTCAACTACGCGGCCAGCTTCACCCTGATGCACTT CCTGCACTTCACGCTCGCCACCAAGCAGCCGGCGATGACCGCCCCGACGCTCGCGCGCGAGCTGGACGGCACCGGCAGCG ACGCGGGCATGCGCGAGTTCGTGGCCTCGGTGATCGCGCTGATCCGCACCCAGGCGGCCGCGATCACCGGCAACATGCTG GTGGTGCTGCCGGTGTGCCTCGCCGTGCAGCTCGGCGCCCACGCGCTGCTGCACGCCGACGTGATCTCGCCGGCCAAGGC GCATGCCACGCTGCGCTCGTTCTCGCTGCTCGGGCCCACGCCCGTCTACGCGGCGCTGACCGGCGTGCTGCTGTGGGCCT CGAGCCTGGTCGCGGGCTGGGCCGACAACTGGTTCGTGCTGCACCGCGTCGGCGACGCGATCGCCTGGCACCGCCGGCTG CGGCTCACGCTCGGCGCGGCCGGCGCGGCGCGGCTGGCCCGCTTCTGTCGCAGCAACGTGGCCGGGGTGGTCAGCAACGT CGGGCTCGGCATGATGCTCGGGCTGGTGCCGGCGATCGTCAGCGCCTTCGCGTTCGGCTTCGAGGTGCGCCACGTGACGC TGTCGGCCGGCTCGATCGGTGTGGCCCTCGGCGTGCTCGGCAAGGGCGCGCTCGACTCGGCCGAGCTGTGGTGGGCGGCG GCCGGCGTGCTGTCGATGGCGGTGCTCAACGTCGCCGTCAGCTTCGCGCTGGCCTTCACGATGGCGGTACGCTCGCGCAG CCTGCGGCCGACCCGGGTGCGCGCGTTGCTGGCCGCGATCGGGCGCGCCGTGCGGGCGAACCCGCTGAGCCTCATCTGGC CGCTCGCCGCCCGCGGCGAGCGCGAGACGCGTCCGCACTGA
Upstream 100 bases:
>100_bases AACCGGTGCCGCCGCCTCCGGTCGCCTTGCGTTTTCGCAATCGATTAACGATGCTTGACGCCGAGCGACGCCGCCCCCGT GGCCCACCCATCGACCGCCC
Downstream 100 bases:
>100_bases ACCGGCCACGGCGCGCGAGCCGCTGCCGCATCGGCATGCCGGCGGCCCGGGCCGCGCGGGCGCGCGCCGGGCCGGCGGCG CCGCCCGCGTACAATGACGG
Product: Site-specific recombinase-like protein
Products: NA
Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MFRSLPILLKKWRASRSASHQLDALLANADADAPYAERSEWLIELAHWLRRDGTLQTPGASDGAAAEPRSPTATAHARLR YVLHVLDRNPAWKTHVARILRALLRETDAISLLCDAGMPVHSGFFGALFERIDASLIPPAPNRRELAALFTLMFPAPGDG AWIEALPDDLLARLQELFGHDVSEAERHQPGSFSRDLLAALHNLSCQISSTGLSQTVRSRLAADDAHRPIDAQPFYRLMR AMLAVEAAQAAVDEGGEPDRLLHEVNYLRVLLDECRESADDVSAHLYRNGVSVDIVFQVERMRMRIQRAESLLNAWMARD DRRGLARLTAELIDANLSSQSVAHLVRSSTSLFARKLVETNADTGEHYITRGRADYLKMMRMAAGGGLVTVATVCVKFWI TGAHLQAMVEGFLAGLNYAASFTLMHFLHFTLATKQPAMTAPTLARELDGTGSDAGMREFVASVIALIRTQAAAITGNML VVLPVCLAVQLGAHALLHADVISPAKAHATLRSFSLLGPTPVYAALTGVLLWASSLVAGWADNWFVLHRVGDAIAWHRRL RLTLGAAGAARLARFCRSNVAGVVSNVGLGMMLGLVPAIVSAFAFGFEVRHVTLSAGSIGVALGVLGKGALDSAELWWAA AGVLSMAVLNVAVSFALAFTMAVRSRSLRPTRVRALLAAIGRAVRANPLSLIWPLAARGERETRPH
Sequences:
>Translated_706_residues MFRSLPILLKKWRASRSASHQLDALLANADADAPYAERSEWLIELAHWLRRDGTLQTPGASDGAAAEPRSPTATAHARLR YVLHVLDRNPAWKTHVARILRALLRETDAISLLCDAGMPVHSGFFGALFERIDASLIPPAPNRRELAALFTLMFPAPGDG AWIEALPDDLLARLQELFGHDVSEAERHQPGSFSRDLLAALHNLSCQISSTGLSQTVRSRLAADDAHRPIDAQPFYRLMR AMLAVEAAQAAVDEGGEPDRLLHEVNYLRVLLDECRESADDVSAHLYRNGVSVDIVFQVERMRMRIQRAESLLNAWMARD DRRGLARLTAELIDANLSSQSVAHLVRSSTSLFARKLVETNADTGEHYITRGRADYLKMMRMAAGGGLVTVATVCVKFWI TGAHLQAMVEGFLAGLNYAASFTLMHFLHFTLATKQPAMTAPTLARELDGTGSDAGMREFVASVIALIRTQAAAITGNML VVLPVCLAVQLGAHALLHADVISPAKAHATLRSFSLLGPTPVYAALTGVLLWASSLVAGWADNWFVLHRVGDAIAWHRRL RLTLGAAGAARLARFCRSNVAGVVSNVGLGMMLGLVPAIVSAFAFGFEVRHVTLSAGSIGVALGVLGKGALDSAELWWAA AGVLSMAVLNVAVSFALAFTMAVRSRSLRPTRVRALLAAIGRAVRANPLSLIWPLAARGERETRPH >Mature_706_residues MFRSLPILLKKWRASRSASHQLDALLANADADAPYAERSEWLIELAHWLRRDGTLQTPGASDGAAAEPRSPTATAHARLR YVLHVLDRNPAWKTHVARILRALLRETDAISLLCDAGMPVHSGFFGALFERIDASLIPPAPNRRELAALFTLMFPAPGDG AWIEALPDDLLARLQELFGHDVSEAERHQPGSFSRDLLAALHNLSCQISSTGLSQTVRSRLAADDAHRPIDAQPFYRLMR AMLAVEAAQAAVDEGGEPDRLLHEVNYLRVLLDECRESADDVSAHLYRNGVSVDIVFQVERMRMRIQRAESLLNAWMARD DRRGLARLTAELIDANLSSQSVAHLVRSSTSLFARKLVETNADTGEHYITRGRADYLKMMRMAAGGGLVTVATVCVKFWI TGAHLQAMVEGFLAGLNYAASFTLMHFLHFTLATKQPAMTAPTLARELDGTGSDAGMREFVASVIALIRTQAAAITGNML VVLPVCLAVQLGAHALLHADVISPAKAHATLRSFSLLGPTPVYAALTGVLLWASSLVAGWADNWFVLHRVGDAIAWHRRL RLTLGAAGAARLARFCRSNVAGVVSNVGLGMMLGLVPAIVSAFAFGFEVRHVTLSAGSIGVALGVLGKGALDSAELWWAA AGVLSMAVLNVAVSFALAFTMAVRSRSLRPTRVRALLAAIGRAVRANPLSLIWPLAARGERETRPH
Specific function: Unknown
COG id: COG4389
COG function: function code L; Site-specific recombinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76444; Mature: 76444
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSLPILLKKWRASRSASHQLDALLANADADAPYAERSEWLIELAHWLRRDGTLQTPGA CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC SDGAAAEPRSPTATAHARLRYVLHVLDRNPAWKTHVARILRALLRETDAISLLCDAGMPV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCC HSGFFGALFERIDASLIPPAPNRRELAALFTLMFPAPGDGAWIEALPDDLLARLQELFGH CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCC DVSEAERHQPGSFSRDLLAALHNLSCQISSTGLSQTVRSRLAADDAHRPIDAQPFYRLMR CHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH AMLAVEAAQAAVDEGGEPDRLLHEVNYLRVLLDECRESADDVSAHLYRNGVSVDIVFQVE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH RMRMRIQRAESLLNAWMARDDRRGLARLTAELIDANLSSQSVAHLVRSSTSLFARKLVET HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC NADTGEHYITRGRADYLKMMRMAAGGGLVTVATVCVKFWITGAHLQAMVEGFLAGLNYAA CCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFTLMHFLHFTLATKQPAMTAPTLARELDGTGSDAGMREFVASVIALIRTQAAAITGNML HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH VVLPVCLAVQLGAHALLHADVISPAKAHATLRSFSLLGPTPVYAALTGVLLWASSLVAGW HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC ADNWFVLHRVGDAIAWHRRLRLTLGAAGAARLARFCRSNVAGVVSNVGLGMMLGLVPAIV CCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFAFGFEVRHVTLSAGSIGVALGVLGKGALDSAELWWAAAGVLSMAVLNVAVSFALAFT HHHHHHHEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVRSRSLRPTRVRALLAAIGRAVRANPLSLIWPLAARGERETRPH HHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHEECHHCCCCCCCCCC >Mature Secondary Structure MFRSLPILLKKWRASRSASHQLDALLANADADAPYAERSEWLIELAHWLRRDGTLQTPGA CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC SDGAAAEPRSPTATAHARLRYVLHVLDRNPAWKTHVARILRALLRETDAISLLCDAGMPV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCC HSGFFGALFERIDASLIPPAPNRRELAALFTLMFPAPGDGAWIEALPDDLLARLQELFGH CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCC DVSEAERHQPGSFSRDLLAALHNLSCQISSTGLSQTVRSRLAADDAHRPIDAQPFYRLMR CHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH AMLAVEAAQAAVDEGGEPDRLLHEVNYLRVLLDECRESADDVSAHLYRNGVSVDIVFQVE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH RMRMRIQRAESLLNAWMARDDRRGLARLTAELIDANLSSQSVAHLVRSSTSLFARKLVET HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC NADTGEHYITRGRADYLKMMRMAAGGGLVTVATVCVKFWITGAHLQAMVEGFLAGLNYAA CCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFTLMHFLHFTLATKQPAMTAPTLARELDGTGSDAGMREFVASVIALIRTQAAAITGNML HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH VVLPVCLAVQLGAHALLHADVISPAKAHATLRSFSLLGPTPVYAALTGVLLWASSLVAGW HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC ADNWFVLHRVGDAIAWHRRLRLTLGAAGAARLARFCRSNVAGVVSNVGLGMMLGLVPAIV CCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFAFGFEVRHVTLSAGSIGVALGVLGKGALDSAELWWAAAGVLSMAVLNVAVSFALAFT HHHHHHHEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVRSRSLRPTRVRALLAAIGRAVRANPLSLIWPLAARGERETRPH HHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHEECHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA