| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026234
Identifier: 238026234
GI number: 238026234
Start: 596787
End: 597620
Strand: Direct
Name: 238026234
Synonym: bglu_1g05650
Alternate gene names: NA
Gene position: 596787-597620 (Clockwise)
Preceding gene: 238026233
Following gene: 238026236
Centisome position: 15.28
GC content: 76.38
Gene sequence:
>834_bases GTGAGCGGTGCCGCGCGGGGCCCGTCCGGCGCCGGCTTTGCGGCGATCGACTGGCAACTGCCGTGGCTCGCACCGTTCGC GGCGCGCGGGCCGCGCTGGCAGGCAGCCGCGCTGGCCGGCGAGGCCGCCTGGCTCGCGGCGGTGGCCGCCGACGCGGCCG TGGCCGGCATCGGCACCGGGCGCGGCCTGCCGCTGCGGTTCATCGAGCAGGCCGCGCTGCCGGCCGGCGTCGCCTACGAG ACGCAGATCGCCACCACCGGCGGCGTGCCGACCCGCCACAACCTCCACGATTTCTTCAACGCGCTGGTCTGGTTCGCCTA TCCGCGCCTCAAGGCCGCGATCAACGCGCGACAGTCCGCGGCGATCGACGCGCTCGGCGTGGGCGGCACGCGCGGCGGCC TGCGCGATGCGCTGACGCTGCTCGACGAGAACGGGGCGCTGTTCGTCACCGCCGATCCGGCGCTTGGCGACGCGCTGCGC CGCTTCGGCTGGCGCGCGTTGTTCGTCGAGGCGCGTGCAGCCTGGGGCCGGGCCTGCGAACTGCGGCTGGTGGGCCACGC GCTGCTCGAGAAACTCGTCGCGCCCTACAAGGCCTGCTGCGCGCATGCCTGGATCGTCGAGGCGCCGCCCGCCTGGTTCG GTTGGGACGAGGGCGCGCGCCGAGGCTGGCTCGACGCGCACGTGGCCGCTGGCTTCGATGCTCGCCTGCCGCCGCACGGC GGCTTCGCGCCGGTGCCGGTGCTCGGCGTGCCGGGCTGGTGCGCCGCGAACGCGGAGCCGGGCTTCTACGACGACCCGCG AGTGTTCCGCGCCGGCCGCCGCGCGCACGGCTAG
Upstream 100 bases:
>100_bases CGCTGCGTCGCGAGACCTGGCAGTTGCCGGCCACCGTCGAGGCCGGCGACACCGCGGTCGTGCCGCTGCGCGGCGGCGAG CCGATCGGCTGGCGCCTGGT
Downstream 100 bases:
>100_bases GGCACGGCACGGCCCCGGCCGAGGATGGTCCGGTTCGCGGCAGGGCCGCGTCGATGCTAGAATTCGCCTCGCAAAGTGGG CCAGGCAGTCGCGGCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative Transmembrane Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSGAARGPSGAGFAAIDWQLPWLAPFAARGPRWQAAALAGEAAWLAAVAADAAVAGIGTGRGLPLRFIEQAALPAGVAYE TQIATTGGVPTRHNLHDFFNALVWFAYPRLKAAINARQSAAIDALGVGGTRGGLRDALTLLDENGALFVTADPALGDALR RFGWRALFVEARAAWGRACELRLVGHALLEKLVAPYKACCAHAWIVEAPPAWFGWDEGARRGWLDAHVAAGFDARLPPHG GFAPVPVLGVPGWCAANAEPGFYDDPRVFRAGRRAHG
Sequences:
>Translated_277_residues MSGAARGPSGAGFAAIDWQLPWLAPFAARGPRWQAAALAGEAAWLAAVAADAAVAGIGTGRGLPLRFIEQAALPAGVAYE TQIATTGGVPTRHNLHDFFNALVWFAYPRLKAAINARQSAAIDALGVGGTRGGLRDALTLLDENGALFVTADPALGDALR RFGWRALFVEARAAWGRACELRLVGHALLEKLVAPYKACCAHAWIVEAPPAWFGWDEGARRGWLDAHVAAGFDARLPPHG GFAPVPVLGVPGWCAANAEPGFYDDPRVFRAGRRAHG >Mature_276_residues SGAARGPSGAGFAAIDWQLPWLAPFAARGPRWQAAALAGEAAWLAAVAADAAVAGIGTGRGLPLRFIEQAALPAGVAYET QIATTGGVPTRHNLHDFFNALVWFAYPRLKAAINARQSAAIDALGVGGTRGGLRDALTLLDENGALFVTADPALGDALRR FGWRALFVEARAAWGRACELRLVGHALLEKLVAPYKACCAHAWIVEAPPAWFGWDEGARRGWLDAHVAAGFDARLPPHGG FAPVPVLGVPGWCAANAEPGFYDDPRVFRAGRRAHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29140; Mature: 29009
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAARGPSGAGFAAIDWQLPWLAPFAARGPRWQAAALAGEAAWLAAVAADAAVAGIGTG CCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCC RGLPLRFIEQAALPAGVAYETQIATTGGVPTRHNLHDFFNALVWFAYPRLKAAINARQSA CCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIDALGVGGTRGGLRDALTLLDENGALFVTADPALGDALRRFGWRALFVEARAAWGRACE HHHEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCEEEEEHHHHCCCCEE LRLVGHALLEKLVAPYKACCAHAWIVEAPPAWFGWDEGARRGWLDAHVAAGFDARLPPHG HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC GFAPVPVLGVPGWCAANAEPGFYDDPRVFRAGRRAHG CCCCCCEECCCCCEECCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure SGAARGPSGAGFAAIDWQLPWLAPFAARGPRWQAAALAGEAAWLAAVAADAAVAGIGTG CCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCC RGLPLRFIEQAALPAGVAYETQIATTGGVPTRHNLHDFFNALVWFAYPRLKAAINARQSA CCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIDALGVGGTRGGLRDALTLLDENGALFVTADPALGDALRRFGWRALFVEARAAWGRACE HHHEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCEEEEEHHHHCCCCEE LRLVGHALLEKLVAPYKACCAHAWIVEAPPAWFGWDEGARRGWLDAHVAAGFDARLPPHG HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC GFAPVPVLGVPGWCAANAEPGFYDDPRVFRAGRRAHG CCCCCCEECCCCCEECCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA