| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gltK [H]
Identifier: 238026230
GI number: 238026230
Start: 593069
End: 593746
Strand: Direct
Name: gltK [H]
Synonym: bglu_1g05610
Alternate gene names: 238026230
Gene position: 593069-593746 (Clockwise)
Preceding gene: 238026229
Following gene: 238026231
Centisome position: 15.18
GC content: 64.75
Gene sequence:
>678_bases ATGCACGACTTCGACTGGAGTGGGATTCCCGGCGCGCTGCCCGCGCTGTGGACGGGGGCGATCGTCACGCTCGAGATCAC CGCGCTCGCGATCGTGGTCGGCATCGTATGGGGCACGCTGCTCGCGCTGATGCGGCTGTCGGGCGTCGCCGCGCTGCAAT GGTTCGCGCGGCTCTACGTGACGGTGTTCCGTTCCATCCCGCTGGTGATGGTGCTGCTATGGTTCTTCCTGATCGTGCCG CAACTGCTGCAGGGCGTGCTCGGGCTGTCGCCGACCATCGACATCCGGCTCGCCTCGGCGATGATCGCGTTCTCGTTGTT CGAGGCTGCGTATTATTCGGAGATCATTCGCGCGGGGATTCAGGCGGTGCCGCGCGGGCAGGTCAACGCGGCGTTCGCGC TCGGCATGGGCTACGGCCAGGCGATGCGCCTCGTGATCCTGCCGCAGGCGTTTCGCGCGATGGTGCCGCTGCTGCTCACG CAGGCGATCGTGCTGTTCCAGGACACCTCGCTCGTCTATGTGATCAGCCTCGCGGACTTCTTCCGCACGGCCACCAACAT CGGCGATCGCGACGGCACCAGCGTCGAGATGATCCTGTTCGCGGGCGCCTGCTATTTCGTCGTGTGCGTGCTGGCTTCCG CACTCGTCAAGGGTCTTCAGAAAAAGGTTACAAGATGA
Upstream 100 bases:
>100_bases CCGTCACGCTCGCCTACGTGATCATCAACCTCGTCGTGATGGCCCTGATGCGCTGGATCGAATCCAGGACGCGGCTGCCC GGCTATATCGGAGGCAAGTG
Downstream 100 bases:
>100_bases TTTCCATCAAGAACGTCTCGAAGTGGTATGGGCAGTTCCAGGTGCTGACCGACTGCACGACGGAGGTGAAGAAGGGCGAG GTGGTGGTGGTGTGCGGGCC
Product: glutamate/aspartate transport system permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHDFDWSGIPGALPALWTGAIVTLEITALAIVVGIVWGTLLALMRLSGVAALQWFARLYVTVFRSIPLVMVLLWFFLIVP QLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMILFAGACYFVVCVLASALVKGLQKKVTR
Sequences:
>Translated_225_residues MHDFDWSGIPGALPALWTGAIVTLEITALAIVVGIVWGTLLALMRLSGVAALQWFARLYVTVFRSIPLVMVLLWFFLIVP QLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMILFAGACYFVVCVLASALVKGLQKKVTR >Mature_225_residues MHDFDWSGIPGALPALWTGAIVTLEITALAIVVGIVWGTLLALMRLSGVAALQWFARLYVTVFRSIPLVMVLLWFFLIVP QLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMILFAGACYFVVCVLASALVKGLQKKVTR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=69.8198198198198, Blast_Score=314, Evalue=3e-87, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=36.9158878504673, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=35.7142857142857, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1786874, Length=187, Percent_Identity=32.620320855615, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1787030, Length=222, Percent_Identity=28.8288288288288, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=26.7281105990783, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=27.2321428571429, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24446; Mature: 24446
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDFDWSGIPGALPALWTGAIVTLEITALAIVVGIVWGTLLALMRLSGVAALQWFARLYV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVPRGQVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF HHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRTATNIGDRDGTSVEMILFAGACYFVVCVLASALVKGLQKKVTR HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHDFDWSGIPGALPALWTGAIVTLEITALAIVVGIVWGTLLALMRLSGVAALQWFARLYV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVPRGQVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF HHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRTATNIGDRDGTSVEMILFAGACYFVVCVLASALVKGLQKKVTR HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]