| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gltJ [H]
Identifier: 238026229
GI number: 238026229
Start: 592329
End: 593069
Strand: Direct
Name: gltJ [H]
Synonym: bglu_1g05600
Alternate gene names: 238026229
Gene position: 592329-593069 (Clockwise)
Preceding gene: 238026228
Following gene: 238026230
Centisome position: 15.16
GC content: 65.32
Gene sequence:
>741_bases ATGTCTTACCACTGGAACTGGGGAATCTTCCTGAGCCCCGTTTCGACGGGCGAGCCGACCACCTACCTCGGCTGGCTGCT ATCGGGCTTCTGGGTGACCATCAAGGTCTCGCTGGTGGCCTGGGTGATCGCGCTCGTCGTCGGCTCGCTGTTCGGCGTGC TGCGCACCGTCCCCAACCGCTGGCTGTCCGCGCTCGGCACGCTCTACGTGTCGATTTTCCGCAACATCCCGCTGATCGTG CAGTTCTTCGTCTGGTACCTGGTGGTGCCCGAACTGCTGCCGCCCGCGCTGGGCACCTGGATCAAGCAGTTGCCGCCGGG CACGCAGTTCTTCACCGCCTCGGTGGTGTGCCTGGGCCTCTTCACCGGCGCGCGCGTGTGCGAGCAGGTGCGCTCGGGCA TCGCCGCGCTGCCCAAGGGCCAGCGCGCGGCCGGGCTCGCGATGGGCTTCACCGAATGGCAGACCTACCGCTTCGTGCTG CTGCCGGTGGCCTATCGGATCATCGTGCCGCCGCTCACCTCCGAGTTTCTGAATATCTTCAAGAATTCGGCGGTGGCCTC GACCATCGGCCTGCTCGACCTGTCGGCCCAGGCGCGCCAGCTGGTCGACTACACCGCGCAGACCTATGAATCGTTCATCG CCGTCACGCTCGCCTACGTGATCATCAACCTCGTCGTGATGGCCCTGATGCGCTGGATCGAATCCAGGACGCGGCTGCCC GGCTATATCGGAGGCAAGTGA
Upstream 100 bases:
>100_bases AGGCGCTCGACTGAGTCGCCCGGTGTCGCGTTCGACGCTCTGATGCAACGGAAGAGGCACCGCGCTTCTTCCGTTTCTTT TTGCTGGAGTCCTGTCCATC
Downstream 100 bases:
>100_bases TGCACGACTTCGACTGGAGTGGGATTCCCGGCGCGCTGCCCGCGCTGTGGACGGGGGCGATCGTCACGCTCGAGATCACC GCGCTCGCGATCGTGGTCGG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNRWLSALGTLYVSIFRNIPLIV QFFVWYLVVPELLPPALGTWIKQLPPGTQFFTASVVCLGLFTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVL LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTRLP GYIGGK
Sequences:
>Translated_246_residues MSYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNRWLSALGTLYVSIFRNIPLIV QFFVWYLVVPELLPPALGTWIKQLPPGTQFFTASVVCLGLFTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVL LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTRLP GYIGGK >Mature_245_residues SYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNRWLSALGTLYVSIFRNIPLIVQ FFVWYLVVPELLPPALGTWIKQLPPGTQFFTASVVCLGLFTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVLL PVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTRLPG YIGGK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=247, Percent_Identity=63.5627530364373, Blast_Score=325, Evalue=1e-90, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=29.2237442922374, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=30.8755760368664, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=28.9719626168224, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1788645, Length=224, Percent_Identity=29.9107142857143, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994930, Length=126, Percent_Identity=40.4761904761905, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87082239, Length=175, Percent_Identity=29.7142857142857, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=26.027397260274, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=23.7668161434978, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787086, Length=221, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27341; Mature: 27209
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNR CCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLSALGTLYVSIFRNIPLIVQFFVWYLVVPELLPPALGTWIKQLPPGTQFFTASVVCLGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHH FTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVLLPVAYRIIVPPLTSEFLNIF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYIGGK CCCCCC >Mature Secondary Structure SYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNR CEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLSALGTLYVSIFRNIPLIVQFFVWYLVVPELLPPALGTWIKQLPPGTQFFTASVVCLGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHH FTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVLLPVAYRIIVPPLTSEFLNIF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYIGGK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]