| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026138
Identifier: 238026138
GI number: 238026138
Start: 495313
End: 495819
Strand: Direct
Name: 238026138
Synonym: bglu_1g04680
Alternate gene names: NA
Gene position: 495313-495819 (Clockwise)
Preceding gene: 238026137
Following gene: 238026139
Centisome position: 12.68
GC content: 67.06
Gene sequence:
>507_bases ATGATTCAAGCAGGCGATACGCTGCCCGACGCACAAGTCTTCGAGTTCGTCGACGAAGCGCGCGAGGGTTGTACGCTCGG GCCGAATGCGCTCGGCGTGCGCGAACAGACGGCGGGCAAACGCGTGGTGATCTTCGGATTGCCCGGCGCGTTCACGCCCA CCTGTTCGGCCAGGCACGTGCCCGGCTACGTCGAACTGGCCGAGCCGCTGCGCGCGGCCGGCGTCGACGAGGTCTGGTGC GTGTCCGTCAACGACGCGTTCGTGATGGGCGCCTGGGGACGGGATCTGCACACCGCGGGCAAGGTGCGCATGATCGCGGA CGGCAGCGCTGCATTGACTCAGGCATTGGGGCTTACGCAGGATTTGTCCGCGCGCGGCATGGGGATCCGTTCCCAGCGCT ACGCGATGGTGGTCGACGACGGCGTGGTCAAGACGCTGGCAGTCGAGGCACCGGGCAAGTTCGAAGTCAGCGACGCGGCA AGCATCCTGGCAGCGCTCACGCGCTGA
Upstream 100 bases:
>100_bases GCGCCGGGCCGGGCAAGCTGCCCTCTTCGCTTCGGCGCAGCGGGACGGGTCGTGTTTTCCGTTGCGAAACCCGCAACCGC ATCGCAATGAAGGACCAGGC
Downstream 100 bases:
>100_bases GTGGGCCGCCGTGGCCGTTGCGTTGACGCAACGCGTCATGGTGAGACAAGGTGCCGCTATATGGGCCGGCATCCGGAAAC GCCTCCGTTCCGGACGTCGG
Product: AhpC/TSA family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHVPGYVELAEPLRAAGVDEVWC VSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQDLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAA SILAALTR
Sequences:
>Translated_168_residues MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHVPGYVELAEPLRAAGVDEVWC VSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQDLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAA SILAALTR >Mature_168_residues MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHVPGYVELAEPLRAAGVDEVWC VSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQDLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAA SILAALTR
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=168, Percent_Identity=44.047619047619, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323138, Length=155, Percent_Identity=34.1935483870968, Blast_Score=80, Evalue=1e-16, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=47.7124183006536, Blast_Score=140, Evalue=5e-34, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=47.7124183006536, Blast_Score=140, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17633; Mature: 17633
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHV CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC PGYVELAEPLRAAGVDEVWCVSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQ CCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHCCCC DLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAASILAALTR CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHCC >Mature Secondary Structure MIQAGDTLPDAQVFEFVDEAREGCTLGPNALGVREQTAGKRVVIFGLPGAFTPTCSARHV CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC PGYVELAEPLRAAGVDEVWCVSVNDAFVMGAWGRDLHTAGKVRMIADGSAALTQALGLTQ CCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHCCCC DLSARGMGIRSQRYAMVVDDGVVKTLAVEAPGKFEVSDAASILAALTR CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]