| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is murC [H]
Identifier: 238026133
GI number: 238026133
Start: 489467
End: 490867
Strand: Direct
Name: murC [H]
Synonym: bglu_1g04630
Alternate gene names: 238026133
Gene position: 489467-490867 (Clockwise)
Preceding gene: 238026132
Following gene: 238026134
Centisome position: 12.53
GC content: 70.09
Gene sequence:
>1401_bases ATGAAACACATCGTCAAACACGTCCATTTCGTCGGCATCGGCGGCGCCGGCATGAGCGGCATCGCCGAGGTGCTGGTGAA CCTCGGCTACGAGGTCAGCGGCTCGGACCTGTCGCGCAATGCCGTGACGGAACGGCTCACCGCACTCGGCGCGCGTGTCG CGATCGGCCACGACGCGGCCAATATCGAGGGCGCGAACGCGGTCGTCACGTCCACGGCGGTGCGCTCGGACAATCCGGAA GTGCTCGCGGCGCGGCGCCTGGGCGTGCCGATCGTGCCGCGCGCGGTGATGCTGGCCGAGCTGATGCGCCTGAAGCAGGG CATCGCAATCGCCGGCACCCACGGCAAGACCACCACCACCAGCCTGGTGGCGAGCGTGCTCGCGGCGGGCGGCCTGGACC CGACCTTCGTGATCGGCGGGCGCCTGATCAGCGCCGGCGCGAACGCGCGGCTCGGCTCGGGCGACTTCATCGTCGCCGAG GCCGACGAGTCGGACGCCTCGTTTTTGAACCTGTATCCCGTCATCGAGGTGATCACCAACATCGACGAGGATCACATGGA CACCTACGGGCACGACTTCGCGCGGCTCAAGCAGGCGTTCATCGAATTCACCCAGAAGCTGCCGTTCTACGGCAGCGTGG TGGTCTGCGTCGACGATCCGAACGTGCGTCAGATCCTGCCGTTCATCTCGAAGCCGGTGGTGCGCTACGGTCTCGCGCCC GATGCCGAGGTCCGCGCCGAGCAGGTGGCGGCGCGTGACGGCCGCATGCATTTCACTGCGATCCGCGAGGGCCGCGCGCC GCTGGCGGTGGTGCTGAACCTGCCGGGCCTGCACAACGTGCAGAACGCGCTCGCGGCGATCGCCATCGCGACCGACCTCG GCGTGGCCGACGCGGCGATCCAGCAGGCGCTTGCCGATTTCAACGGGGTCGGCCGGCGCTTTCAGCGCTACGGCGAGATC GCGACGGCCGACGGCGCGGGCAGCTACACGCTGGTGGACGACTACGGCCACCATCCGGTCGAGATGGCCGCCACGATCGC CGCCGCGCGCGGCGCGTTTCCGGGCCGCCGGCTGGTGCTGGCGTTCCAGCCTCACCGTTACACGCGCACGCGCGACTGCT TCGAGGAATTCGTCAACGTGCTCTCGACCGTCGACGAGCTGGTGCTGACCGAGGTCTACGCCGCCGGCGAGGCGCCGATC CCGACCGCGAGCGGCGAGGCGCTCGCTCGCGCGCTGCGTGCGAGCGGTCGCGTCGATCCCGCGTTCGTGGCGACGGTCGA CGAGGTGCCGGCGGCGCTCGCGCAGCGCGTGCGCGCGGGCGACGTGGTGATCACGATGGGCGCGGGGTCGATCGGCGGCG TGCCGGGCCGGATCGCGCAGCAACAGCAACGGAAGGAATGA
Upstream 100 bases:
>100_bases AGATGGCCGAACGTTCGCGCTCGCTCGCGAAGCCCGACGCCACCGACGTGGTCGCGCGCGTGTGCGCGCAGGTGGCCGGC GCGAACCTGGAATCGAAGTC
Downstream 100 bases:
>100_bases CATGAGCGGGATCGATCCGAAACGTTTCGGCAAGGTGGCGGTACTGTTCGGCGGCGTGTCCGCCGAGCGCGAGGTGTCGC TGAATTCGGGCCGGCTGGTG
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKHIVKHVHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTERLTALGARVAIGHDAANIEGANAVVTSTAVRSDNPE VLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGSGDFIVAE ADESDASFLNLYPVIEVITNIDEDHMDTYGHDFARLKQAFIEFTQKLPFYGSVVVCVDDPNVRQILPFISKPVVRYGLAP DAEVRAEQVAARDGRMHFTAIREGRAPLAVVLNLPGLHNVQNALAAIAIATDLGVADAAIQQALADFNGVGRRFQRYGEI ATADGAGSYTLVDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEEFVNVLSTVDELVLTEVYAAGEAPI PTASGEALARALRASGRVDPAFVATVDEVPAALAQRVRAGDVVITMGAGSIGGVPGRIAQQQQRKE
Sequences:
>Translated_466_residues MKHIVKHVHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTERLTALGARVAIGHDAANIEGANAVVTSTAVRSDNPE VLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGSGDFIVAE ADESDASFLNLYPVIEVITNIDEDHMDTYGHDFARLKQAFIEFTQKLPFYGSVVVCVDDPNVRQILPFISKPVVRYGLAP DAEVRAEQVAARDGRMHFTAIREGRAPLAVVLNLPGLHNVQNALAAIAIATDLGVADAAIQQALADFNGVGRRFQRYGEI ATADGAGSYTLVDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEEFVNVLSTVDELVLTEVYAAGEAPI PTASGEALARALRASGRVDPAFVATVDEVPAALAQRVRAGDVVITMGAGSIGGVPGRIAQQQQRKE >Mature_466_residues MKHIVKHVHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTERLTALGARVAIGHDAANIEGANAVVTSTAVRSDNPE VLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGSGDFIVAE ADESDASFLNLYPVIEVITNIDEDHMDTYGHDFARLKQAFIEFTQKLPFYGSVVVCVDDPNVRQILPFISKPVVRYGLAP DAEVRAEQVAARDGRMHFTAIREGRAPLAVVLNLPGLHNVQNALAAIAIATDLGVADAAIQQALADFNGVGRRFQRYGEI ATADGAGSYTLVDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEEFVNVLSTVDELVLTEVYAAGEAPI PTASGEALARALRASGRVDPAFVATVDEVPAALAQRVRAGDVVITMGAGSIGGVPGRIAQQQQRKE
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=459, Percent_Identity=52.0697167755991, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1790680, Length=469, Percent_Identity=28.997867803838, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 49108; Mature: 49108
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIVKHVHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTERLTALGARVAIGHDAA CCHHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCC NIEGANAVVTSTAVRSDNPEVLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTT CCCCCCEEEEEHHHCCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH SLVASVLAAGGLDPTFVIGGRLISAGANARLGSGDFIVAEADESDASFLNLYPVIEVITN HHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC IDEDHMDTYGHDFARLKQAFIEFTQKLPFYGSVVVCVDDPNVRQILPFISKPVVRYGLAP CCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC DAEVRAEQVAARDGRMHFTAIREGRAPLAVVLNLPGLHNVQNALAAIAIATDLGVADAAI CHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHH QQALADFNGVGRRFQRYGEIATADGAGSYTLVDDYGHHPVEMAATIAAARGAFPGRRLVL HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE AFQPHRYTRTRDCFEEFVNVLSTVDELVLTEVYAAGEAPIPTASGEALARALRASGRVDP EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC AFVATVDEVPAALAQRVRAGDVVITMGAGSIGGVPGRIAQQQQRKE HHEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKHIVKHVHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTERLTALGARVAIGHDAA CCHHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCC NIEGANAVVTSTAVRSDNPEVLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTT CCCCCCEEEEEHHHCCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH SLVASVLAAGGLDPTFVIGGRLISAGANARLGSGDFIVAEADESDASFLNLYPVIEVITN HHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC IDEDHMDTYGHDFARLKQAFIEFTQKLPFYGSVVVCVDDPNVRQILPFISKPVVRYGLAP CCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC DAEVRAEQVAARDGRMHFTAIREGRAPLAVVLNLPGLHNVQNALAAIAIATDLGVADAAI CHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHH QQALADFNGVGRRFQRYGEIATADGAGSYTLVDDYGHHPVEMAATIAAARGAFPGRRLVL HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE AFQPHRYTRTRDCFEEFVNVLSTVDELVLTEVYAAGEAPIPTASGEALARALRASGRVDP EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC AFVATVDEVPAALAQRVRAGDVVITMGAGSIGGVPGRIAQQQQRKE HHEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA