| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026096
Identifier: 238026096
GI number: 238026096
Start: 442160
End: 442786
Strand: Direct
Name: 238026096
Synonym: bglu_1g04250
Alternate gene names: NA
Gene position: 442160-442786 (Clockwise)
Preceding gene: 238026095
Following gene: 238026101
Centisome position: 11.32
GC content: 70.65
Gene sequence:
>627_bases ATGCCAGCCATCCGGGCGGTCGTGTTCGATTTCGGCGGGGTGCTGATCGACTGGAACCCCGAGTATCTGTACCGGCAGCT GATTCCCGACGCGCAAGCGCGGCGGCGCTTTCTCACCGAGGTCTGCGGGATGGACTGGGTGGTGCGGCAGGACGCCGGGC AGACGCTCGCGGACGGCACCGCCGAGAAGGTCGCCGCGTTTCCTCAGCATGAGGCGCTGATCCGCGCGTTCTACGCGCGC TGGCCCGAGATGGTGGCGGGCCAGTTCGACGACGGGGTCGCGCTGGTCGAGCGGCTCGACGCGGCCGGCGTGCCGCTGTT CGGGCTCACCAACTGGTCGGCCGAGACGTTCCCGTATGCGTGGCAGCGCTATGCGGTGCTGCGCCGCTTTCGCGACATCG TGGTGTCGGGGCGCGTGAAGCTCGCCAAGCCCGATCCGGCGATCTATCGCGAGATGTTCGCGCGCATCGCCGCGCAACTG CCCGGCATCGCGCCGGGCGAACTCGTGTTCATCGACGACAACCCGCGCAACGTGCAGGCGGCCGCCGCGCTCGGCTGGCA CGGCATCCGCCATACGGACGCGGCCGCCACCGAGGCGCGACTGCGCGAGCTGGGCGTGCCCGCCTGA
Upstream 100 bases:
>100_bases GCGAGCGCGTCGGCCCGCTCGTCACCGGGGCGGCGCGGGCCTGGCTCGAGGCGCGCACGCGGCCGCTCTGACGCGCCGGG CGGATTCGGAAGGGGGAGGT
Downstream 100 bases:
>100_bases GGCGCGGCGCGCCCGCGTCGTGCGGCCTCGCCGCTCACCGGGCAACGGGCGAAGCCGCCCGTTGCCCGGGTTGCCGCGTG CCGCTCAGCGGCTGATCGGC
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; HAD Family Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Had-Superfamily Hydrolase Subfamily Ia; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPAIRAVVFDFGGVLIDWNPEYLYRQLIPDAQARRRFLTEVCGMDWVVRQDAGQTLADGTAEKVAAFPQHEALIRAFYAR WPEMVAGQFDDGVALVERLDAAGVPLFGLTNWSAETFPYAWQRYAVLRRFRDIVVSGRVKLAKPDPAIYREMFARIAAQL PGIAPGELVFIDDNPRNVQAAAALGWHGIRHTDAAATEARLRELGVPA
Sequences:
>Translated_208_residues MPAIRAVVFDFGGVLIDWNPEYLYRQLIPDAQARRRFLTEVCGMDWVVRQDAGQTLADGTAEKVAAFPQHEALIRAFYAR WPEMVAGQFDDGVALVERLDAAGVPLFGLTNWSAETFPYAWQRYAVLRRFRDIVVSGRVKLAKPDPAIYREMFARIAAQL PGIAPGELVFIDDNPRNVQAAAALGWHGIRHTDAAATEARLRELGVPA >Mature_207_residues PAIRAVVFDFGGVLIDWNPEYLYRQLIPDAQARRRFLTEVCGMDWVVRQDAGQTLADGTAEKVAAFPQHEALIRAFYARW PEMVAGQFDDGVALVERLDAAGVPLFGLTNWSAETFPYAWQRYAVLRRFRDIVVSGRVKLAKPDPAIYREMFARIAAQLP GIAPGELVFIDDNPRNVQAAAALGWHGIRHTDAAATEARLRELGVPA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23179; Mature: 23048
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIRAVVFDFGGVLIDWNPEYLYRQLIPDAQARRRFLTEVCGMDWVVRQDAGQTLADGT CCCHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCHHHCCC AEKVAAFPQHEALIRAFYARWPEMVAGQFDDGVALVERLDAAGVPLFGLTNWSAETFPYA HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHH WQRYAVLRRFRDIVVSGRVKLAKPDPAIYREMFARIAAQLPGIAPGELVFIDDNPRNVQA HHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH AAALGWHGIRHTDAAATEARLRELGVPA HHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure PAIRAVVFDFGGVLIDWNPEYLYRQLIPDAQARRRFLTEVCGMDWVVRQDAGQTLADGT CCHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCHHHCCC AEKVAAFPQHEALIRAFYARWPEMVAGQFDDGVALVERLDAAGVPLFGLTNWSAETFPYA HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHH WQRYAVLRRFRDIVVSGRVKLAKPDPAIYREMFARIAAQLPGIAPGELVFIDDNPRNVQA HHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH AAALGWHGIRHTDAAATEARLRELGVPA HHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA