| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pepQ [H]
Identifier: 238026095
GI number: 238026095
Start: 440304
End: 442130
Strand: Direct
Name: pepQ [H]
Synonym: bglu_1g04240
Alternate gene names: 238026095
Gene position: 440304-442130 (Clockwise)
Preceding gene: 238026094
Following gene: 238026096
Centisome position: 11.27
GC content: 73.02
Gene sequence:
>1827_bases ATGGAATCCAACATGAACGCCCGTCATCCCGACGTCTCGCCCGTCCCCGCCCGGCTTGCCCTGTTGCGCAGCGCGATGGC GCGCGAGGGCGTCGCCGCCTGCCTCGTGCCGTCTGCCGATCCGCACCTGTCGGAATACCTGCCGGAGCACTGGCAGTCGC GCCGCTGGCTGTCCGGCTTCACCGGCTCGGTCGGCACGCTGGTCGTGACGGCCGATTTCGCCGGCCTTTGGGTCGACAGC CGCTACTGGGTGCAGGCCGCCGCGCAACTCGACGGCACCGGCGTGCAGCTGATGAAGATGATGGGCGGCCAGCAGACCCA GCCGCACGTCGAATGGCTCGCCGAGCACGTGCCGGCCGGCGCCGCGGTCAGCGTGGACGGCGCGGTGCTCGGCGTGGCCG CCGCGCGCGCGCTGGCCGCGGCGCTGGCCGCGCGCGGCGTGGTGCTGCGCACCGATCTGGATCTGCTCGAGCGGATCTGG CCGGAGCGTCCCGCGCTGCCGGCGGCGCCCGTGTTCGAGCACGTCGCGCCGCACGCGCAGATCGCGCGCGCCGCCAAGCT CGCGCAGGTGCGTGAGGCGATGCGCGCGCAGGGCGCCGGGGTCCATTTCATCTCGACGCTCGACGACATCGCGTGGCTGT TCAACCTGCGCGGCGCCGACGTCAGCTACAACCCGGTGTTCGTCGCGCATGCGCTGATCACGGCCGACCAGGCGACGTTG TTCGTCGTCGACGGCAAGCTCGACGCGGCGCTGCAGGCGTCGCTCGCGGCCGACGGCGTGACGGTGCGCGCCTACGAGAC GGCCGCCGCCGCGCTGGCCGCGCTGCCGGCCGGCAGCACGCTGCTGATCGATCCGCGCCGCGTGACGTTCGGCTCGCTGC AGGCGGTGCCGGACACGGTGAGGCTGGCCGAGGCCGTCAACCCGTCGACCTTCGCGAAGTCGCGCAAGACGCCGGCCGAG ATCGCCCACGTGCGCGAGACGATGGCGCGCGACGGCGCGGCGCTGGCCGAATTCTTCGCCTGGTTCGAGGCCGCGCTCGG CCGCGAGACCGTGACCGAGCTGACCATCGACGAGCAGCTGAACGCCGCGCGCGCGCGACAGCCCGGCTTCGTGTCGCCGA GCTTCGCGACCATCGCCGGCTTCAACGCGAACGGCGCGATGCCGCATTACCGGGCGACGCCCGAGGCGCACGCGACGATC GAGGGCGACGGGCTGCTGCTGATCGACTCGGGCGGCCAGTTCGTGGGCGGCACCACCGACATCACGCGCGTGGTGCCGAT CGGCACGCCGAGCGAGGCGCAGCGGCGCGACTTCACGATCGTGCTGAAGGCGATGATCGCGCTGTCGCGCGCGCGCTTCC CGCGCGGCATCCGCTCGCCGATGCTCGACGCGATCGCGCGCGCGCCGATGTGGGCCGCCGGGCTCGACTACGGCCACGGC ACGGGTCACGGCGTCGGCTATTTCCTGAACGTCCACGAAGGCCCGCAGGTGATCGCGCACTACGCGGCGGCCGATCCGCA GACGGCGATGGAGGAGGGCATGATCACCTCGAACGAGCCGGGCGTGTACCGGCCCGGGCAATGGGGCGTGCGCATCGAGA ACCTGGTGCTGAACCGCGCGGCGGGACAGACGCCGTTCGGCGACTTCCTCGAGTTCGAGACGCTCACGCTGTGCCCGATC GACACGCGCTGCGTGCTGGCCGAACTGCTCGACGCGGGCGAGCGCGCCTGGCTCGACGACTATCATGCGACGGTGCGCGA GCGCGTCGGCCCGCTCGTCACCGGGGCGGCGCGGGCCTGGCTCGAGGCGCGCACGCGGCCGCTCTGA
Upstream 100 bases:
>100_bases CACGACGGCGGCACGCTCGAATGGCCGGTCTGTGCCGTCACGGCGCTCGTCGCCACCACGTTGACCATGGGCGCGCTCGC CCGCCGCTGAACCCTCACGG
Downstream 100 bases:
>100_bases CGCGCCGGGCGGATTCGGAAGGGGGAGGTATGCCAGCCATCCGGGCGGTCGTGTTCGATTTCGGCGGGGTGCTGATCGAC TGGAACCCCGAGTATCTGTA
Product: peptidase M24
Products: NA
Alternate protein names: X-Pro dipeptidase; Imidodipeptidase; Proline dipeptidase; Prolidase [H]
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MESNMNARHPDVSPVPARLALLRSAMAREGVAACLVPSADPHLSEYLPEHWQSRRWLSGFTGSVGTLVVTADFAGLWVDS RYWVQAAAQLDGTGVQLMKMMGGQQTQPHVEWLAEHVPAGAAVSVDGAVLGVAAARALAAALAARGVVLRTDLDLLERIW PERPALPAAPVFEHVAPHAQIARAAKLAQVREAMRAQGAGVHFISTLDDIAWLFNLRGADVSYNPVFVAHALITADQATL FVVDGKLDAALQASLAADGVTVRAYETAAAALAALPAGSTLLIDPRRVTFGSLQAVPDTVRLAEAVNPSTFAKSRKTPAE IAHVRETMARDGAALAEFFAWFEAALGRETVTELTIDEQLNAARARQPGFVSPSFATIAGFNANGAMPHYRATPEAHATI EGDGLLLIDSGGQFVGGTTDITRVVPIGTPSEAQRRDFTIVLKAMIALSRARFPRGIRSPMLDAIARAPMWAAGLDYGHG TGHGVGYFLNVHEGPQVIAHYAAADPQTAMEEGMITSNEPGVYRPGQWGVRIENLVLNRAAGQTPFGDFLEFETLTLCPI DTRCVLAELLDAGERAWLDDYHATVRERVGPLVTGAARAWLEARTRPL
Sequences:
>Translated_608_residues MESNMNARHPDVSPVPARLALLRSAMAREGVAACLVPSADPHLSEYLPEHWQSRRWLSGFTGSVGTLVVTADFAGLWVDS RYWVQAAAQLDGTGVQLMKMMGGQQTQPHVEWLAEHVPAGAAVSVDGAVLGVAAARALAAALAARGVVLRTDLDLLERIW PERPALPAAPVFEHVAPHAQIARAAKLAQVREAMRAQGAGVHFISTLDDIAWLFNLRGADVSYNPVFVAHALITADQATL FVVDGKLDAALQASLAADGVTVRAYETAAAALAALPAGSTLLIDPRRVTFGSLQAVPDTVRLAEAVNPSTFAKSRKTPAE IAHVRETMARDGAALAEFFAWFEAALGRETVTELTIDEQLNAARARQPGFVSPSFATIAGFNANGAMPHYRATPEAHATI EGDGLLLIDSGGQFVGGTTDITRVVPIGTPSEAQRRDFTIVLKAMIALSRARFPRGIRSPMLDAIARAPMWAAGLDYGHG TGHGVGYFLNVHEGPQVIAHYAAADPQTAMEEGMITSNEPGVYRPGQWGVRIENLVLNRAAGQTPFGDFLEFETLTLCPI DTRCVLAELLDAGERAWLDDYHATVRERVGPLVTGAARAWLEARTRPL >Mature_608_residues MESNMNARHPDVSPVPARLALLRSAMAREGVAACLVPSADPHLSEYLPEHWQSRRWLSGFTGSVGTLVVTADFAGLWVDS RYWVQAAAQLDGTGVQLMKMMGGQQTQPHVEWLAEHVPAGAAVSVDGAVLGVAAARALAAALAARGVVLRTDLDLLERIW PERPALPAAPVFEHVAPHAQIARAAKLAQVREAMRAQGAGVHFISTLDDIAWLFNLRGADVSYNPVFVAHALITADQATL FVVDGKLDAALQASLAADGVTVRAYETAAAALAALPAGSTLLIDPRRVTFGSLQAVPDTVRLAEAVNPSTFAKSRKTPAE IAHVRETMARDGAALAEFFAWFEAALGRETVTELTIDEQLNAARARQPGFVSPSFATIAGFNANGAMPHYRATPEAHATI EGDGLLLIDSGGQFVGGTTDITRVVPIGTPSEAQRRDFTIVLKAMIALSRARFPRGIRSPMLDAIARAPMWAAGLDYGHG TGHGVGYFLNVHEGPQVIAHYAAADPQTAMEEGMITSNEPGVYRPGQWGVRIENLVLNRAAGQTPFGDFLEFETLTLCPI DTRCVLAELLDAGERAWLDDYHATVRERVGPLVTGAARAWLEARTRPL
Specific function: Splits dipeptides with a prolyl in the C-terminal position and a nonpolar amino acid at the N-terminal position [H]
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family. Archaeal-type prolidase subfamily [H]
Homologues:
Organism=Homo sapiens, GI264681563, Length=614, Percent_Identity=36.1563517915309, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI93141226, Length=604, Percent_Identity=33.4437086092715, Blast_Score=345, Evalue=7e-95, Organism=Homo sapiens, GI264681565, Length=614, Percent_Identity=34.5276872964169, Blast_Score=345, Evalue=9e-95, Organism=Escherichia coli, GI1788728, Length=230, Percent_Identity=33.0434782608696, Blast_Score=87, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17509539, Length=620, Percent_Identity=31.7741935483871, Blast_Score=306, Evalue=3e-83, Organism=Caenorhabditis elegans, GI25149105, Length=625, Percent_Identity=26.72, Blast_Score=231, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6322999, Length=653, Percent_Identity=30.3215926493109, Blast_Score=295, Evalue=2e-80, Organism=Drosophila melanogaster, GI17137632, Length=620, Percent_Identity=33.3870967741935, Blast_Score=324, Evalue=1e-88, Organism=Drosophila melanogaster, GI161078230, Length=610, Percent_Identity=27.0491803278689, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI21357287, Length=610, Percent_Identity=27.0491803278689, Blast_Score=236, Evalue=5e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.13.9 [H]
Molecular weight: Translated: 64983; Mature: 64983
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNMNARHPDVSPVPARLALLRSAMAREGVAACLVPSADPHLSEYLPEHWQSRRWLSGF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCHHCCC TGSVGTLVVTADFAGLWVDSRYWVQAAAQLDGTGVQLMKMMGGQQTQPHVEWLAEHVPAG CCCCEEEEEEECCCCEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC AAVSVDGAVLGVAAARALAAALAARGVVLRTDLDLLERIWPERPALPAAPVFEHVAPHAQ CEEECCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHCCHHH IARAAKLAQVREAMRAQGAGVHFISTLDDIAWLFNLRGADVSYNPVFVAHALITADQATL HHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCCCEEE FVVDGKLDAALQASLAADGVTVRAYETAAAALAALPAGSTLLIDPRRVTFGSLQAVPDTV EEECCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHH RLAEAVNPSTFAKSRKTPAEIAHVRETMARDGAALAEFFAWFEAALGRETVTELTIDEQL HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHEEHHHHH NAARARQPGFVSPSFATIAGFNANGAMPHYRATPEAHATIEGDGLLLIDSGGQFVGGTTD HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCC ITRVVPIGTPSEAQRRDFTIVLKAMIALSRARFPRGIRSPMLDAIARAPMWAAGLDYGHG CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC TGHGVGYFLNVHEGPQVIAHYAAADPQTAMEEGMITSNEPGVYRPGQWGVRIENLVLNRA CCCCEEEEEEECCCHHHHHHHHCCCCHHHHHCCCEECCCCCCCCCCCCCCEEHHHHHHHC AGQTPFGDFLEFETLTLCPIDTRCVLAELLDAGERAWLDDYHATVRERVGPLVTGAARAW CCCCCCCHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH LEARTRPL HHHHCCCC >Mature Secondary Structure MESNMNARHPDVSPVPARLALLRSAMAREGVAACLVPSADPHLSEYLPEHWQSRRWLSGF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCHHCCC TGSVGTLVVTADFAGLWVDSRYWVQAAAQLDGTGVQLMKMMGGQQTQPHVEWLAEHVPAG CCCCEEEEEEECCCCEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC AAVSVDGAVLGVAAARALAAALAARGVVLRTDLDLLERIWPERPALPAAPVFEHVAPHAQ CEEECCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHCCHHH IARAAKLAQVREAMRAQGAGVHFISTLDDIAWLFNLRGADVSYNPVFVAHALITADQATL HHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCCCEEE FVVDGKLDAALQASLAADGVTVRAYETAAAALAALPAGSTLLIDPRRVTFGSLQAVPDTV EEECCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHH RLAEAVNPSTFAKSRKTPAEIAHVRETMARDGAALAEFFAWFEAALGRETVTELTIDEQL HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHEEHHHHH NAARARQPGFVSPSFATIAGFNANGAMPHYRATPEAHATIEGDGLLLIDSGGQFVGGTTD HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEECCCCC ITRVVPIGTPSEAQRRDFTIVLKAMIALSRARFPRGIRSPMLDAIARAPMWAAGLDYGHG CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC TGHGVGYFLNVHEGPQVIAHYAAADPQTAMEEGMITSNEPGVYRPGQWGVRIENLVLNRA CCCCEEEEEEECCCHHHHHHHHCCCCHHHHHCCCEECCCCCCCCCCCCCCEEHHHHHHHC AGQTPFGDFLEFETLTLCPIDTRCVLAELLDAGERAWLDDYHATVRERVGPLVTGAARAW CCCCCCCHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH LEARTRPL HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]