Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026072

Identifier: 238026072

GI number: 238026072

Start: 417703

End: 418554

Strand: Reverse

Name: 238026072

Synonym: bglu_1g04000

Alternate gene names: NA

Gene position: 418554-417703 (Counterclockwise)

Preceding gene: 238026075

Following gene: 238026071

Centisome position: 10.71

GC content: 60.92

Gene sequence:

>852_bases
GTGATTGCCGTCGTCCTGATCGCGTATTTCGCCATCGCCGTGCTGGCCGCCGCCTTGTTCCTGTTGCCGGGCGTTCGGGC
CAGCCTGTTCGGCTCGGTGGCGCAGTTTCACGGAAGATTAAGCCGGCGCGTTTCGGACCGAGCGCAGCGCACTCGCGGCC
ATATTCTCAAATCGGCAAAAATTTCGCGAAACTCTTTAAGCGATCTGCAAAATTTACTGATTCGGCGACGCTTGCTGATT
ATGGGCGCGGCAGGTATTCTTGCGACGCCTCCGTTGATCGCGATTGCGTTACGCGGTCGGCAATTATTCCAATACGACGA
CACCATACGCGTTCCCGACGAAAAGATCGCCGCGCTGCTGCAAGGCGAACAGCTCGTCCCGCCGTTGCCGCTGCCGCCCG
AAGTCTTCGCCACCCGCGAAGTCGAGCAGATCCGGCCCGCGCTGAAGGATGCGAGTCGCGACTGGAACTTGCTCGATCCG
GATTTCCGCACGCGCTTGCTGCTCGTCTACAAGATCATGCACGAGCAGTACGGATACGAAATGGCGCTGCTCGAAGGCTA
TCGCAGTCCCGAACGGCAGAACCGGCTTGCCCAGATGGGCACGAACGTGACGAACGCGGCCGCGTACCAGAGCTATCACC
AGTTCGGTCTCGCGGCCGACAACGCGTTCCTGCGCGACGGCAAGCTGGTGATCTCCGAGAAGGACCCGTGGGCCATGCGC
GGTTATCAGCTGTACGGTCAGGTCGCCGAGCAGGTGGGCCTGACCTGGGGTGGCCGATGGAAGATGATGGACCTCGGACA
CGTCGAATTCCATAAACCCGGCTTCAAGCTGGGACATCCGCCGCCACAGTGA

Upstream 100 bases:

>100_bases
TTAATTCGCAGCAATAATATCGCCCGGCCGACTCGAAGCAGGCCTGATTCTAAGAGCAAGACTTCTAAAAGACAATCGAT
TGTAAATTTCGGGGATTTCA

Downstream 100 bases:

>100_bases
CGGCGTCGCAAAACCTGAGGGCGGTATGGGGAAGATGAACGACAGCGCCGGCGGCCAAGCCGGCCAGCCACGCGCCCGGG
GGCGCCGCGCCGGATGCGCG

Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins

Products: NA

Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase Family; Transmembrane Protein; LysM Domain-Containing Protein; Subfamily; D-Alanyl-D-Alanine Carboxypeptidase Family Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIAVVLIAYFAIAVLAAALFLLPGVRASLFGSVAQFHGRLSRRVSDRAQRTRGHILKSAKISRNSLSDLQNLLIRRRLLI
MGAAGILATPPLIAIALRGRQLFQYDDTIRVPDEKIAALLQGEQLVPPLPLPPEVFATREVEQIRPALKDASRDWNLLDP
DFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAYQSYHQFGLAADNAFLRDGKLVISEKDPWAMR
GYQLYGQVAEQVGLTWGGRWKMMDLGHVEFHKPGFKLGHPPPQ

Sequences:

>Translated_283_residues
MIAVVLIAYFAIAVLAAALFLLPGVRASLFGSVAQFHGRLSRRVSDRAQRTRGHILKSAKISRNSLSDLQNLLIRRRLLI
MGAAGILATPPLIAIALRGRQLFQYDDTIRVPDEKIAALLQGEQLVPPLPLPPEVFATREVEQIRPALKDASRDWNLLDP
DFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAYQSYHQFGLAADNAFLRDGKLVISEKDPWAMR
GYQLYGQVAEQVGLTWGGRWKMMDLGHVEFHKPGFKLGHPPPQ
>Mature_283_residues
MIAVVLIAYFAIAVLAAALFLLPGVRASLFGSVAQFHGRLSRRVSDRAQRTRGHILKSAKISRNSLSDLQNLLIRRRLLI
MGAAGILATPPLIAIALRGRQLFQYDDTIRVPDEKIAALLQGEQLVPPLPLPPEVFATREVEQIRPALKDASRDWNLLDP
DFRTRLLLVYKIMHEQYGYEMALLEGYRSPERQNRLAQMGTNVTNAAAYQSYHQFGLAADNAFLRDGKLVISEKDPWAMR
GYQLYGQVAEQVGLTWGGRWKMMDLGHVEFHKPGFKLGHPPPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31836; Mature: 31836

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVVLIAYFAIAVLAAALFLLPGVRASLFGSVAQFHGRLSRRVSDRAQRTRGHILKSAK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRNSLSDLQNLLIRRRLLIMGAAGILATPPLIAIALRGRQLFQYDDTIRVPDEKIAALL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCEECCCCEECCHHHHHHHH
QGEQLVPPLPLPPEVFATREVEQIRPALKDASRDWNLLDPDFRTRLLLVYKIMHEQYGYE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
MALLEGYRSPERQNRLAQMGTNVTNAAAYQSYHQFGLAADNAFLRDGKLVISEKDPWAMR
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHH
GYQLYGQVAEQVGLTWGGRWKMMDLGHVEFHKPGFKLGHPPPQ
HHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MIAVVLIAYFAIAVLAAALFLLPGVRASLFGSVAQFHGRLSRRVSDRAQRTRGHILKSAK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRNSLSDLQNLLIRRRLLIMGAAGILATPPLIAIALRGRQLFQYDDTIRVPDEKIAALL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCEECCCCEECCHHHHHHHH
QGEQLVPPLPLPPEVFATREVEQIRPALKDASRDWNLLDPDFRTRLLLVYKIMHEQYGYE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
MALLEGYRSPERQNRLAQMGTNVTNAAAYQSYHQFGLAADNAFLRDGKLVISEKDPWAMR
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHH
GYQLYGQVAEQVGLTWGGRWKMMDLGHVEFHKPGFKLGHPPPQ
HHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA