| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025973
Identifier: 238025973
GI number: 238025973
Start: 314783
End: 315733
Strand: Direct
Name: 238025973
Synonym: bglu_1g02990
Alternate gene names: NA
Gene position: 314783-315733 (Clockwise)
Preceding gene: 238025971
Following gene: 238025974
Centisome position: 8.06
GC content: 74.97
Gene sequence:
>951_bases ATGACGGGGTATCGACAATGGATGGCCGGGCGGCGGCTTGCCGCCGGCATCGATGTGGGACAGGACGTGGTGCGGGTCGC GTTCGTGAGCCGGCGCGGCAGCGTGATTGGCATCGAGCGGCTGGAGTGCGAGCCGCTCGATGCGTCGCACGACGTGGCGG GCGGTGACTGGGCGGCGGTGACGCGCGCGCTGGCACGCGTGGCCGGGCGGGCCGGCGCGCGGCTGCCGGTCGGCCGGATG CCGGCGGCGATGGCGCTGTCGTGCCGCGAGGTCGCGATGTCGATGCTCGACGCGCGCCTCGCGGCGGACGGCCCGCTCGA ACCGGCCGTGCTGGTCGAGGCCGAGCGCGCCACCGGCATGGCGCGCGATTCGCTCGCGATCGACTGGTGCGTCAACGACA TCCTGCATCCCGGACGCGTGATGATCGCGTCGACCGACCGCGCGCGCATCGACGTGCGCGTCGAGGCGGCGGCGGCGGCC GGCTTCGGCCTGACCGCGATCGACGGCGAGCCGCATGCGGCGTTGCGAGCGATCCGGCAGGTCGCCGCGCTCGAGGTCGA GGCCGATGCGCCCTACGCGGCAATCTGGATCGGCGCCGGCGGCATGGACGGCTGGCGCGTCGAGGCGACTACCGCAACGA CCCACGTGCGAGCGCCGTCGCCGGCCCGCGCGAGCGTTGCCGACGCGCTGCGCGAGCTGGCGCGGCGCGGCGGCGAGATC GATTGCGCGTTCGTGGGCGGGGCGCTCGACGAAGGCGTCGAGGATGACGCGCGCGGTGGGCCCGGCGCGATCGCGGCGCG GCTTGCCGAAATCGGCGACCTGCTCGGCTGTGCCGCACTGCCGTTCGAATGCGCGGCGTATTGCCGGCGGCCCGGGATCG ATGCGGCGGCGTGCCATTCGCCGCGCTTCGCGGTGGCGTTCGGGCTCGGCCTGCGCGGGGTGTGCGAATGA
Upstream 100 bases:
>100_bases GGGCCGGCCGGCCGTTCGGCCGACTGGTCGCGCGCCGGTCGGCCGGCAACAATTCCCGTCATGCCGTGCCCGTGCCGCAC GGCGGCCGGGAGGGCCGATC
Downstream 100 bases:
>100_bases GCGCGCGACGGCGGCTCGCGGTGGTGCCGCCGCGCGCGGTGATGCGAGACCCGGCGCGGTGCCGCGCCTGGCTGGGCGGC TTCAATCTGATGCCGTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTGYRQWMAGRRLAAGIDVGQDVVRVAFVSRRGSVIGIERLECEPLDASHDVAGGDWAAVTRALARVAGRAGARLPVGRM PAAMALSCREVAMSMLDARLAADGPLEPAVLVEAERATGMARDSLAIDWCVNDILHPGRVMIASTDRARIDVRVEAAAAA GFGLTAIDGEPHAALRAIRQVAALEVEADAPYAAIWIGAGGMDGWRVEATTATTHVRAPSPARASVADALRELARRGGEI DCAFVGGALDEGVEDDARGGPGAIAARLAEIGDLLGCAALPFECAAYCRRPGIDAAACHSPRFAVAFGLGLRGVCE
Sequences:
>Translated_316_residues MTGYRQWMAGRRLAAGIDVGQDVVRVAFVSRRGSVIGIERLECEPLDASHDVAGGDWAAVTRALARVAGRAGARLPVGRM PAAMALSCREVAMSMLDARLAADGPLEPAVLVEAERATGMARDSLAIDWCVNDILHPGRVMIASTDRARIDVRVEAAAAA GFGLTAIDGEPHAALRAIRQVAALEVEADAPYAAIWIGAGGMDGWRVEATTATTHVRAPSPARASVADALRELARRGGEI DCAFVGGALDEGVEDDARGGPGAIAARLAEIGDLLGCAALPFECAAYCRRPGIDAAACHSPRFAVAFGLGLRGVCE >Mature_315_residues TGYRQWMAGRRLAAGIDVGQDVVRVAFVSRRGSVIGIERLECEPLDASHDVAGGDWAAVTRALARVAGRAGARLPVGRMP AAMALSCREVAMSMLDARLAADGPLEPAVLVEAERATGMARDSLAIDWCVNDILHPGRVMIASTDRARIDVRVEAAAAAG FGLTAIDGEPHAALRAIRQVAALEVEADAPYAAIWIGAGGMDGWRVEATTATTHVRAPSPARASVADALRELARRGGEID CAFVGGALDEGVEDDARGGPGAIAARLAEIGDLLGCAALPFECAAYCRRPGIDAAACHSPRFAVAFGLGLRGVCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32801; Mature: 32670
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYRQWMAGRRLAAGIDVGQDVVRVAFVSRRGSVIGIERLECEPLDASHDVAGGDWAAV CCCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHH TRALARVAGRAGARLPVGRMPAAMALSCREVAMSMLDARLAADGPLEPAVLVEAERATGM HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCC ARDSLAIDWCVNDILHPGRVMIASTDRARIDVRVEAAAAAGFGLTAIDGEPHAALRAIRQ CHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEHHCCCCEEEECCCCHHHHHHHHH VAALEVEADAPYAAIWIGAGGMDGWRVEATTATTHVRAPSPARASVADALRELARRGGEI HHHEEEECCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCE DCAFVGGALDEGVEDDARGGPGAIAARLAEIGDLLGCAALPFECAAYCRRPGIDAAACHS EEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCC PRFAVAFGLGLRGVCE CCEEEEECCCCCCCCC >Mature Secondary Structure TGYRQWMAGRRLAAGIDVGQDVVRVAFVSRRGSVIGIERLECEPLDASHDVAGGDWAAV CCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHH TRALARVAGRAGARLPVGRMPAAMALSCREVAMSMLDARLAADGPLEPAVLVEAERATGM HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCC ARDSLAIDWCVNDILHPGRVMIASTDRARIDVRVEAAAAAGFGLTAIDGEPHAALRAIRQ CHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEHHCCCCEEEECCCCHHHHHHHHH VAALEVEADAPYAAIWIGAGGMDGWRVEATTATTHVRAPSPARASVADALRELARRGGEI HHHEEEECCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCE DCAFVGGALDEGVEDDARGGPGAIAARLAEIGDLLGCAALPFECAAYCRRPGIDAAACHS EEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCC PRFAVAFGLGLRGVCE CCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA