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The map label for this gene is ybcL [H]

Identifier: 238025901

GI number: 238025901

Start: 238199

End: 238795

Strand: Reverse

Name: ybcL [H]

Synonym: bglu_1g02270

Alternate gene names: 238025901

Gene position: 238795-238199 (Counterclockwise)

Preceding gene: 238025902

Following gene: 238025900

Centisome position: 6.11

GC content: 74.87

Gene sequence:

>597_bases
ATGCGTGAAAGCAGGCAGACGAAGCGAACCGGCCGCAGGCGCGGCGTGAGCGCGTGGCGCCTGCTCGCCGTGCTGGCCGC
GGCGTTCGCCAGCCTGGCGCGGCCCGGCGCGCAGACGCCGTTCTCGGTGACGAGTCCCGAGCTGCGCGACGGCGGCCGCG
TGAGCGCCGCGCAGCGCTACGGGCGCGGCGCCTGCCGCGGCGAGAACCGCTCGCCGGCGCTGGCCTGGCAAAACCCGCCG
CGCGGTACGCGCTCCTATGCGATCACGATGTTCGACCTCGACGCGCCGGGCCGCGGCTGGTGGCACTGGGCCGTGGCCGA
CATTCCGGCCTCGGCCTCCGGCGTGCCCGCGAACGCGAGCGGCTCCGGCTTCCTCGGTAGGCTCGGCGCGGTCGAGGCGC
GCAACGACTTCGGCAGCGACGGCTACGGCGGCCCGTGCCCGCCGCCCGGCAAGCCCCACCGCTACGTGATCACCGTCTAC
GCGCTCGACATCGAGCGCCTGCGCGCGGACCAGGGCCGGCCGCCGCAGTTGTTCGACCATGAGATCAGCGTCTCCGCGCT
CGCCTCCGCACGTCTGACCGTCACCGACGAACGCTAG

Upstream 100 bases:

>100_bases
TAGGCGGCGCCGGTGCTAGACTGCCGCTTCACTGACACAGGGTCGCAACGCGAATTCGGCCGCGCGCCGCGTGGGGCGAC
GTGACGGGAGGGTCGCGGAA

Downstream 100 bases:

>100_bases
CCGCACGGCCCGCACGCGCGGCTTCGCGGCCCGGTTCGCGTGCCGATGCACGGCCGGTCAATATGCCGTCACGCCGGTCC
TGCACGATGAAGCCCGCCCG

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRESRQTKRTGRRRGVSAWRLLAVLAAAFASLARPGAQTPFSVTSPELRDGGRVSAAQRYGRGACRGENRSPALAWQNPP
RGTRSYAITMFDLDAPGRGWWHWAVADIPASASGVPANASGSGFLGRLGAVEARNDFGSDGYGGPCPPPGKPHRYVITVY
ALDIERLRADQGRPPQLFDHEISVSALASARLTVTDER

Sequences:

>Translated_198_residues
MRESRQTKRTGRRRGVSAWRLLAVLAAAFASLARPGAQTPFSVTSPELRDGGRVSAAQRYGRGACRGENRSPALAWQNPP
RGTRSYAITMFDLDAPGRGWWHWAVADIPASASGVPANASGSGFLGRLGAVEARNDFGSDGYGGPCPPPGKPHRYVITVY
ALDIERLRADQGRPPQLFDHEISVSALASARLTVTDER
>Mature_198_residues
MRESRQTKRTGRRRGVSAWRLLAVLAAAFASLARPGAQTPFSVTSPELRDGGRVSAAQRYGRGACRGENRSPALAWQNPP
RGTRSYAITMFDLDAPGRGWWHWAVADIPASASGVPANASGSGFLGRLGAVEARNDFGSDGYGGPCPPPGKPHRYVITVY
ALDIERLRADQGRPPQLFDHEISVSALASARLTVTDER

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=176, Percent_Identity=38.6363636363636, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786990, Length=155, Percent_Identity=40.6451612903226, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 21312; Mature: 21312

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESRQTKRTGRRRGVSAWRLLAVLAAAFASLARPGAQTPFSVTSPELRDGGRVSAAQRY
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
GRGACRGENRSPALAWQNPPRGTRSYAITMFDLDAPGRGWWHWAVADIPASASGVPANAS
CCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCC
GSGFLGRLGAVEARNDFGSDGYGGPCPPPGKPHRYVITVYALDIERLRADQGRPPQLFDH
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCCCCCCCCCCCC
EISVSALASARLTVTDER
CCCHHHHCEEEEEEECCC
>Mature Secondary Structure
MRESRQTKRTGRRRGVSAWRLLAVLAAAFASLARPGAQTPFSVTSPELRDGGRVSAAQRY
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
GRGACRGENRSPALAWQNPPRGTRSYAITMFDLDAPGRGWWHWAVADIPASASGVPANAS
CCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCC
GSGFLGRLGAVEARNDFGSDGYGGPCPPPGKPHRYVITVYALDIERLRADQGRPPQLFDH
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHCCCCCCCCCCCC
EISVSALASARLTVTDER
CCCHHHHCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]