Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025820

Identifier: 238025820

GI number: 238025820

Start: 148581

End: 149270

Strand: Reverse

Name: 238025820

Synonym: bglu_1g01450

Alternate gene names: NA

Gene position: 149270-148581 (Counterclockwise)

Preceding gene: 238025821

Following gene: 238025819

Centisome position: 3.82

GC content: 66.81

Gene sequence:

>690_bases
ATGACGATTAACACGCCCGCTCGCGCGCACTTCGCGCGCGTATCGGCCGCCCGCGCGGCGGCCGCGACGGCGCCCGGTCA
GACGATGGCCGGTGCGACGCCGTACGAGCTGATGCTTGCGAAGCTCGCTGCCGACCGCCGCGCCCTGAAGGGCGTGCAGT
CGGTCGCTCGCAAGGTCGAACTGAAGCGGAAGTTGCTGCCGGAGTACGCCGACTACGTGGCGGGCGTGTTGAACGGCGGC
CACGGCGCGCAGGACGACGTACTCATGACGATCATGGTCTGGCGCATCGATGCCGGAGACTACGACGACGCGCTCGCGAT
CGCCGCATATGCACTCACACACGATCTCGCCCTGCCCGACCAGTTCGAACGGTCGCTCGCTTCAGTCGTCGCCGAGCAGT
TCGCCGATGCCGCGTTGGCCGCGTTCCTTGAGCGCAGCACCTTCGACGCCCACAGCCTGGAGCTGGTCGACGAGCTGACG
GCAGACGCGGACATGCACGACCAAGTGCGCGCGAAGCTCTGCAAGGCACTCGGCTATGCCGTACAGGAAGCCGACCCACC
GCGTGCCCTCGACTATCTGCGCCGCGCGCTGTCGTTGAACGATCGCGTCGGCGTGAAAAAAGACATCGACCGGCTATCGA
AGCTGATCGAAGCCACGGGCCGTCCGGGCGACAGCGCCGAAGGCATGTAA

Upstream 100 bases:

>100_bases
AGCGCGACCAAATCGAGAACTACGAGTCGTCGAACGACGCGTATGTCGTCGAAGACTTTGGTTGCGGCTGTGTCTCGGAA
AACATCGAGCTGGTGGCGGC

Downstream 100 bases:

>100_bases
AGAGCCCACCCCGGCATGGCGGCACCGGCGCCCGTATCCCGCCCTGGGCGATGGACACGGTGCGCCGGTCCACCGCCACC
AACCACGGACCCGACCATGA

Product: phage small terminase subuni

Products: NA

Alternate protein names: Small Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase; Phage Terminase/Endonuclease Subunit; Phage Terminase Endonuclease Small Subunit M; Prophage Small Terminase Subunit; Terminase-Like Protein; Gp1 Phage Terminase Endonuclease Subunit; R Protein; Phage Terminase Endonuclease Subunit; Terminase; Bacteriophage Protein; Phage R Protein; Terminase Small Subunit; Bacteriophage-Related Terminase; Phage P2 Small Terminase Subunit GpM-Like Protein; Bacteriophage Terminase Small Subunit; Phage-Related Terminase

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVELKRKLLPEYADYVAGVLNGG
HGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPDQFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELT
ADADMHDQVRAKLCKALGYAVQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM

Sequences:

>Translated_229_residues
MTINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVELKRKLLPEYADYVAGVLNGG
HGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPDQFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELT
ADADMHDQVRAKLCKALGYAVQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM
>Mature_228_residues
TINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVELKRKLLPEYADYVAGVLNGGH
GAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPDQFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELTA
DADMHDQVRAKLCKALGYAVQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24651; Mature: 24520

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKRKLLPEYADYVAGVLNGGHGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCH
QFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELTADADMHDQVRAKLCKALGYA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKRKLLPEYADYVAGVLNGGHGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCH
QFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELTADADMHDQVRAKLCKALGYA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA