| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025820
Identifier: 238025820
GI number: 238025820
Start: 148581
End: 149270
Strand: Reverse
Name: 238025820
Synonym: bglu_1g01450
Alternate gene names: NA
Gene position: 149270-148581 (Counterclockwise)
Preceding gene: 238025821
Following gene: 238025819
Centisome position: 3.82
GC content: 66.81
Gene sequence:
>690_bases ATGACGATTAACACGCCCGCTCGCGCGCACTTCGCGCGCGTATCGGCCGCCCGCGCGGCGGCCGCGACGGCGCCCGGTCA GACGATGGCCGGTGCGACGCCGTACGAGCTGATGCTTGCGAAGCTCGCTGCCGACCGCCGCGCCCTGAAGGGCGTGCAGT CGGTCGCTCGCAAGGTCGAACTGAAGCGGAAGTTGCTGCCGGAGTACGCCGACTACGTGGCGGGCGTGTTGAACGGCGGC CACGGCGCGCAGGACGACGTACTCATGACGATCATGGTCTGGCGCATCGATGCCGGAGACTACGACGACGCGCTCGCGAT CGCCGCATATGCACTCACACACGATCTCGCCCTGCCCGACCAGTTCGAACGGTCGCTCGCTTCAGTCGTCGCCGAGCAGT TCGCCGATGCCGCGTTGGCCGCGTTCCTTGAGCGCAGCACCTTCGACGCCCACAGCCTGGAGCTGGTCGACGAGCTGACG GCAGACGCGGACATGCACGACCAAGTGCGCGCGAAGCTCTGCAAGGCACTCGGCTATGCCGTACAGGAAGCCGACCCACC GCGTGCCCTCGACTATCTGCGCCGCGCGCTGTCGTTGAACGATCGCGTCGGCGTGAAAAAAGACATCGACCGGCTATCGA AGCTGATCGAAGCCACGGGCCGTCCGGGCGACAGCGCCGAAGGCATGTAA
Upstream 100 bases:
>100_bases AGCGCGACCAAATCGAGAACTACGAGTCGTCGAACGACGCGTATGTCGTCGAAGACTTTGGTTGCGGCTGTGTCTCGGAA AACATCGAGCTGGTGGCGGC
Downstream 100 bases:
>100_bases AGAGCCCACCCCGGCATGGCGGCACCGGCGCCCGTATCCCGCCCTGGGCGATGGACACGGTGCGCCGGTCCACCGCCACC AACCACGGACCCGACCATGA
Product: phage small terminase subuni
Products: NA
Alternate protein names: Small Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase; Phage Terminase/Endonuclease Subunit; Phage Terminase Endonuclease Small Subunit M; Prophage Small Terminase Subunit; Terminase-Like Protein; Gp1 Phage Terminase Endonuclease Subunit; R Protein; Phage Terminase Endonuclease Subunit; Terminase; Bacteriophage Protein; Phage R Protein; Terminase Small Subunit; Bacteriophage-Related Terminase; Phage P2 Small Terminase Subunit GpM-Like Protein; Bacteriophage Terminase Small Subunit; Phage-Related Terminase
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVELKRKLLPEYADYVAGVLNGG HGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPDQFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELT ADADMHDQVRAKLCKALGYAVQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM
Sequences:
>Translated_229_residues MTINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVELKRKLLPEYADYVAGVLNGG HGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPDQFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELT ADADMHDQVRAKLCKALGYAVQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM >Mature_228_residues TINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVELKRKLLPEYADYVAGVLNGGH GAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPDQFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELTA DADMHDQVRAKLCKALGYAVQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24651; Mature: 24520
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRKLLPEYADYVAGVLNGGHGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPD HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCH QFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELTADADMHDQVRAKLCKALGYA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TINTPARAHFARVSAARAAAATAPGQTMAGATPYELMLAKLAADRRALKGVQSVARKVE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRKLLPEYADYVAGVLNGGHGAQDDVLMTIMVWRIDAGDYDDALAIAAYALTHDLALPD HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCH QFERSLASVVAEQFADAALAAFLERSTFDAHSLELVDELTADADMHDQVRAKLCKALGYA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VQEADPPRALDYLRRALSLNDRVGVKKDIDRLSKLIEATGRPGDSAEGM HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA