| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pheC [H]
Identifier: 238025757
GI number: 238025757
Start: 82020
End: 82811
Strand: Reverse
Name: pheC [H]
Synonym: bglu_1g00810
Alternate gene names: 238025757
Gene position: 82811-82020 (Counterclockwise)
Preceding gene: 238025765
Following gene: 238025734
Centisome position: 2.12
GC content: 68.81
Gene sequence:
>792_bases CTGGCGAGCGCGGCCATCGCCGGCGCCATGCCGGCGCGGGCCGCGGACCCGGCCGAAGCCGCCAGTAGCGCCGCCACGCC CCCCACGCCCGCCTCGCGGCTCGACGCGGTGCTGGCGCGCGGCACGCTGCGCGTCTGCACCACCGGTGACTACCGCCCCT ACTCCTACTACCGGCCCGACGGCCGCTTCGAGGGCATCGACATCGATCTGGCCGAGTCGCTCGCGCGCTCGCTCGGCGTG CGGGCCGAGTTCGTCAAAACCAGCTGGCGCACGCTGACGGACGACTTCGTCGCGAAGTGCGACGTCGCAGTAGGCGGCAT TTCGACCACGCTCGACCGCCAAAAGCGCGTGTTCTTCACGCGTGCGACGATGCAGGACGGCAAGACCCCGATCGTGCGCT GCGCCGATGTCGACCGCTACCGTACCATCGCGCAGATCGACCAGCCGTCGACGCGCGTGATCGTGAACCCGGGCGGCACC AACGAGCGCTTCGCGCGGCAGTTCCTGCCGCATGCGACCCTGACGGTCTACCCCGACAACGTGACGATCTTCAGGCAGAT CCTCGACGGCCGCGCGGACGTGATGGTGACCGACGCGTCCGAGACCCGCTGGCAGCAGAAGCTCAATCCCGGGCTCTGCT CGGTCCACCCGGACCAGCCGTTCCAGTTCGGCGAAAAGGCCTACATGCTGCCGCGCGGCGACGTGGTGTTCCAGCAGTAC GTCGACCAGTGGCTGCATCTCGCGCGCGAGACCGGCGAATTTCAATCCATTACGGACCACTGGCTGAAGTAA
Upstream 100 bases:
>100_bases GACTTCGATGCCGTTCGCCCGCCCCCGCGCCCAGCGCCCCATCCATCCCGCGCACCGTGCGCGCCGCCCGCTTCGTCCGC TATCGGCCGTCGCGTTCGCG
Downstream 100 bases:
>100_bases GCCGCGGCGGCCGACGACGGGCGGCAGTCGAGCGTCTCGCCGCCGACACCGCCCCGGTCGGACCGCCCGGAAATCCGTCG CACAATCACCCGCGGCCGCG
Product: Prephenate dehydratase
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MASAAIAGAMPARAADPAEAASSAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPDGRFEGIDIDLAESLARSLGV RAEFVKTSWRTLTDDFVAKCDVAVGGISTTLDRQKRVFFTRATMQDGKTPIVRCADVDRYRTIAQIDQPSTRVIVNPGGT NERFARQFLPHATLTVYPDNVTIFRQILDGRADVMVTDASETRWQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQY VDQWLHLARETGEFQSITDHWLK
Sequences:
>Translated_263_residues MASAAIAGAMPARAADPAEAASSAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPDGRFEGIDIDLAESLARSLGV RAEFVKTSWRTLTDDFVAKCDVAVGGISTTLDRQKRVFFTRATMQDGKTPIVRCADVDRYRTIAQIDQPSTRVIVNPGGT NERFARQFLPHATLTVYPDNVTIFRQILDGRADVMVTDASETRWQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQY VDQWLHLARETGEFQSITDHWLK >Mature_262_residues ASAAIAGAMPARAADPAEAASSAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPDGRFEGIDIDLAESLARSLGVR AEFVKTSWRTLTDDFVAKCDVAVGGISTTLDRQKRVFFTRATMQDGKTPIVRCADVDRYRTIAQIDQPSTRVIVNPGGTN ERFARQFLPHATLTVYPDNVTIFRQILDGRADVMVTDASETRWQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQYV DQWLHLARETGEFQSITDHWLK
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=231, Percent_Identity=24.6753246753247, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787085, Length=216, Percent_Identity=24.0740740740741, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 29249; Mature: 29118
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAAIAGAMPARAADPAEAASSAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPD CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCEECCC GRFEGIDIDLAESLARSLGVRAEFVKTSWRTLTDDFVAKCDVAVGGISTTLDRQKRVFFT CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHEEEE RATMQDGKTPIVRCADVDRYRTIAQIDQPSTRVIVNPGGTNERFARQFLPHATLTVYPDN EEHHCCCCCCEEEECCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCEEEEECCC VTIFRQILDGRADVMVTDASETRWQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQY HHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCHHHHHH VDQWLHLARETGEFQSITDHWLK HHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure ASAAIAGAMPARAADPAEAASSAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPD CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCEECCC GRFEGIDIDLAESLARSLGVRAEFVKTSWRTLTDDFVAKCDVAVGGISTTLDRQKRVFFT CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHEEEE RATMQDGKTPIVRCADVDRYRTIAQIDQPSTRVIVNPGGTNERFARQFLPHATLTVYPDN EEHHCCCCCCEEEECCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCEEEEECCC VTIFRQILDGRADVMVTDASETRWQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQY HHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCHHHHHH VDQWLHLARETGEFQSITDHWLK HHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]