| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fliL [H]
Identifier: 238025701
GI number: 238025701
Start: 22784
End: 23284
Strand: Reverse
Name: fliL [H]
Synonym: bglu_1g00230
Alternate gene names: 238025701
Gene position: 23284-22784 (Counterclockwise)
Preceding gene: 238025703
Following gene: 238025700
Centisome position: 0.6
GC content: 67.86
Gene sequence:
>501_bases ATGGCCACCACGACCGCCTCCGCTTCACCCGAACGCCCGCCGACCGGCAAATTCAAGCGCATCTTCCTGTTCGCGCTGAT CGGCCTGCTGATCGCCGCCGCCGGCGGCGCCGCCGCCTGGTTCTTCCTGCTGCACCGCGAAGCGCCGGCCAGTGCCGCGC ATGCCGCCCCGCCGCAGTTGGCGACGCCGGTGTTCTTCCCGCTGGAATCGATGACAGTGAACCTGCAGTCCGACGACGAC GGCCTGCACTACCTGCGCATCGGCCTGACGCTGAAGCTGACCGATCCGACCGCGCAGGATTACCTGACGCAGCACATGCC GGAGATCCGCAGCCGGATCCTGCTCGCGCTGTCGAACAAGCGCCCCTCGGACCTGGCGACGCTCGACGGCAAGCGCGCGC TGGCCGACGAACTGCGCGCGCTGATCGAGAAACCGACGCAGCCTGGCAATCGCAGCGCACGCGTCGACGCGGTGCTGTTT ACCGATTTCGTCGTCCAGTAA
Upstream 100 bases:
>100_bases CAAACCGGCGAGATGGATGCAAATCCCCCCTCTGTTCTCCCCATCGCAACCGGCTCCGCCCCCCGACAATCAGGCTACAA GTCATCACGTAAGCAAGCAT
Downstream 100 bases:
>100_bases CGCCGCCAAGGGAGCGCCATGGGCCACGAAGAATTCATGTCGCAGGAGGAGGTCGATGCCCTCCTCAAAGGTGTCACGGG AGAGGTTGACGCCAGCGACG
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MATTTASASPERPPTGKFKRIFLFALIGLLIAAAGGAAAWFFLLHREAPASAAHAAPPQLATPVFFPLESMTVNLQSDDD GLHYLRIGLTLKLTDPTAQDYLTQHMPEIRSRILLALSNKRPSDLATLDGKRALADELRALIEKPTQPGNRSARVDAVLF TDFVVQ
Sequences:
>Translated_166_residues MATTTASASPERPPTGKFKRIFLFALIGLLIAAAGGAAAWFFLLHREAPASAAHAAPPQLATPVFFPLESMTVNLQSDDD GLHYLRIGLTLKLTDPTAQDYLTQHMPEIRSRILLALSNKRPSDLATLDGKRALADELRALIEKPTQPGNRSARVDAVLF TDFVVQ >Mature_165_residues ATTTASASPERPPTGKFKRIFLFALIGLLIAAAGGAAAWFFLLHREAPASAAHAAPPQLATPVFFPLESMTVNLQSDDDG LHYLRIGLTLKLTDPTAQDYLTQHMPEIRSRILLALSNKRPSDLATLDGKRALADELRALIEKPTQPGNRSARVDAVLFT DFVVQ
Specific function: Controls the rotational direction of flagella during chemotaxis [H]
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliL family [H]
Homologues:
Organism=Escherichia coli, GI1788254, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005503 [H]
Pfam domain/function: PF03748 FliL [H]
EC number: NA
Molecular weight: Translated: 18018; Mature: 17887
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTTASASPERPPTGKFKRIFLFALIGLLIAAAGGAAAWFFLLHREAPASAAHAAPPQL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC ATPVFFPLESMTVNLQSDDDGLHYLRIGLTLKLTDPTAQDYLTQHMPEIRSRILLALSNK CCCEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC RPSDLATLDGKRALADELRALIEKPTQPGNRSARVDAVLFTDFVVQ CCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHEEHHHHHCC >Mature Secondary Structure ATTTASASPERPPTGKFKRIFLFALIGLLIAAAGGAAAWFFLLHREAPASAAHAAPPQL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC ATPVFFPLESMTVNLQSDDDGLHYLRIGLTLKLTDPTAQDYLTQHMPEIRSRILLALSNK CCCEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC RPSDLATLDGKRALADELRALIEKPTQPGNRSARVDAVLFTDFVVQ CCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]