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The map label for this gene is fliR [H]

Identifier: 238025695

GI number: 238025695

Start: 18847

End: 19626

Strand: Reverse

Name: fliR [H]

Synonym: bglu_1g00170

Alternate gene names: 238025695

Gene position: 19626-18847 (Counterclockwise)

Preceding gene: 238025696

Following gene: 238025694

Centisome position: 0.5

GC content: 67.95

Gene sequence:

>780_bases
ATGGTCTCCGTCACCTACGCGCAACTGAACGTCTGGCTGACCGCGTTCCTCTGGCCGTTCGTGCGGATTCTCGCGCTGGT
GGCCGCCGCGCCCTTGATCGGCAACGCGGCGGTGCCCGTGCGCGTCAAGATCGGCCTGTCGGCGCTCACCGCGATCGCCG
TGGCGCCGGCGCTCGGGCCGCTGCCGCAGGCCACCGTGTTCTCGGCCGAGGGCATCTGGATCCTCGTCAACCAGTTCCTG
ATCGGCGTGTCGATGGGCTTCGTGATGCAAATCGTGTTCGCCGTGGTGGAAGCCGCGGGCGACTACATCGGCCTGCAGAT
GGGGCTCGGCTTTGCCACCTTCTTCGATCCGCACGCCGGCACCACGCCGATGATGGGCCGCATCCTGAACGCCTTCGCGA
TGCTCGCGTTCGTCGCGTTCGACGGCCACCTGCAGCTGATCGCGGCGCTGGTCGAGTCGTTCGCGAGCGTGCCGATCTCG
GCCGACCTGCTGCATCCGGCCGGCTGGCAGACGCTGGCCGGCGCCGGCATCAACGTGTTCGCGATGGGGCTGCTGCTGGC
GCTGCCGGTGGTGGCGGCGCTCCTGATCGCCAACCTCGCGCTCGGCATCCTGAACCGCGCCGCGCCGCAGATCGGCATCT
TCCAGATCGGCTTCCCGGTGCTGATGCTGGTGGGGCTGCTGCTCGTGCAGCTGATGGTGCCCAACATGATGCCGTTCTTC
TCGCGCCTGTTCGACAACGGTTACGAGATGATGGGCCGCGTGGCGGCGGGCTTCCGTTAA

Upstream 100 bases:

>100_bases
CTGACCTCGATGCTCGACTACACGCGCACCATCCTGATGCACGTCGCCACGCTCGGCACCAGCTGAGCGGCGCGCACCGG
CCCGCCCTTCCCGCTTCCCG

Downstream 100 bases:

>100_bases
AATCCGCATCGCGTTGCGCGAACCGGCCCCGGTGCCGGCCGCGCCGTCGCCGCCGCGCGCGCTGCTCGCCTTGCGGCCCC
TGCGGGCCGTATCCGGCGCG

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MVSVTYAQLNVWLTAFLWPFVRILALVAAAPLIGNAAVPVRVKIGLSALTAIAVAPALGPLPQATVFSAEGIWILVNQFL
IGVSMGFVMQIVFAVVEAAGDYIGLQMGLGFATFFDPHAGTTPMMGRILNAFAMLAFVAFDGHLQLIAALVESFASVPIS
ADLLHPAGWQTLAGAGINVFAMGLLLALPVVAALLIANLALGILNRAAPQIGIFQIGFPVLMLVGLLLVQLMVPNMMPFF
SRLFDNGYEMMGRVAAGFR

Sequences:

>Translated_259_residues
MVSVTYAQLNVWLTAFLWPFVRILALVAAAPLIGNAAVPVRVKIGLSALTAIAVAPALGPLPQATVFSAEGIWILVNQFL
IGVSMGFVMQIVFAVVEAAGDYIGLQMGLGFATFFDPHAGTTPMMGRILNAFAMLAFVAFDGHLQLIAALVESFASVPIS
ADLLHPAGWQTLAGAGINVFAMGLLLALPVVAALLIANLALGILNRAAPQIGIFQIGFPVLMLVGLLLVQLMVPNMMPFF
SRLFDNGYEMMGRVAAGFR
>Mature_259_residues
MVSVTYAQLNVWLTAFLWPFVRILALVAAAPLIGNAAVPVRVKIGLSALTAIAVAPALGPLPQATVFSAEGIWILVNQFL
IGVSMGFVMQIVFAVVEAAGDYIGLQMGLGFATFFDPHAGTTPMMGRILNAFAMLAFVAFDGHLQLIAALVESFASVPIS
ADLLHPAGWQTLAGAGINVFAMGLLLALPVVAALLIANLALGILNRAAPQIGIFQIGFPVLMLVGLLLVQLMVPNMMPFF
SRLFDNGYEMMGRVAAGFR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=255, Percent_Identity=43.921568627451, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27325; Mature: 27325

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVTYAQLNVWLTAFLWPFVRILALVAAAPLIGNAAVPVRVKIGLSALTAIAVAPALGP
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCC
LPQATVFSAEGIWILVNQFLIGVSMGFVMQIVFAVVEAAGDYIGLQMGLGFATFFDPHAG
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCCC
TTPMMGRILNAFAMLAFVAFDGHLQLIAALVESFASVPISADLLHPAGWQTLAGAGINVF
CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHCCCHHHH
AMGLLLALPVVAALLIANLALGILNRAAPQIGIFQIGFPVLMLVGLLLVQLMVPNMMPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLFDNGYEMMGRVAAGFR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSVTYAQLNVWLTAFLWPFVRILALVAAAPLIGNAAVPVRVKIGLSALTAIAVAPALGP
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCC
LPQATVFSAEGIWILVNQFLIGVSMGFVMQIVFAVVEAAGDYIGLQMGLGFATFFDPHAG
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCCC
TTPMMGRILNAFAMLAFVAFDGHLQLIAALVESFASVPISADLLHPAGWQTLAGAGINVF
CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHCCCHHHH
AMGLLLALPVVAALLIANLALGILNRAAPQIGIFQIGFPVLMLVGLLLVQLMVPNMMPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLFDNGYEMMGRVAAGFR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]