| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mod [H]
Identifier: 238025694
GI number: 238025694
Start: 16486
End: 18510
Strand: Reverse
Name: mod [H]
Synonym: bglu_1g00160
Alternate gene names: 238025694
Gene position: 18510-16486 (Counterclockwise)
Preceding gene: 238025695
Following gene: 238025693
Centisome position: 0.47
GC content: 70.77
Gene sequence:
>2025_bases ATGGAAGACACGATGCGAAAGATCGAATCCGCCAGTCCCGAGGCCCGCTCCGCGGATCTCGCGGCGGACAACCTCGAACG GCTCAAGGCGCTGTTCCCCGAAGCCGTGACCGAAGGCCCCGACGGCGCCGCGCTCGACCTCGACGTGCTCAAGGCACTGG TCGGCGATCGCACGCTCGGCGAGGCCGACGAGAAGTACGGCCTGGCCTGGCACGGCAAGCGCCGCGCGCGCCAGCTCGCG CTCACGCCCTCCACCGGCACGCTGCGGCCCTGCCGCGACGAGAGCCTGGACTGGGACGGCACCCGCAACCTGATGATCGA GGGCGACAACCTCGAGGTGCTCAAGCTGCTGCACAAGAGCTACGCGGGCTCGGTGAAGCTCGTCTACATCGATCCGCCGT ACAACACCGGCAGGGAATTCGTCTATCCCGACAACTTCGCCGACAGCCTGCGCCACTACCTCGCGCTGACGGGCCAGGCC GCGGGCGGCGTGAAGCTCAGCAGCCACACCGAGGCGAGCGGCCGGTTCCACACCGACTGGCTCAACATGATGTATCCGCG CCTGAAGCTGGCGTTCGACCTGCTCGCGCGCGACGGCCTGATTGCGATCCACATCGACGAGCACGAACTGCCGGCCCTGG TGCTGGTGATGCGCGAGATCTTCGGCGAGGAGAACGAGCTCGGCGTGGCGGTCTGGGACAAGCGCAACCCGAAGGGCGAC GCGCGCGGCCTGGCCTACCAGCACGAGTCGATCGTGCTGTTCGCGCGCGACGCCGAGTGGCTGTACCAGCACGCGCCGTT GAAGCGCCCGAAGCGCAACGCGCAGCGCATGCTCGACGCCGCGCGCGAGGCGATCGCCACCACCGGCGGCATCGCCGAGG CCACCCAGGCCTACCGCGCCTGGCTGCGCGCGCAGACCACGCTGTCGGGCGGCGAGGCGATGTACGACCGGCTCTCGCCC GACGGCCGCGTCTACCGGCTCGTCTCGATGGCCTGGCCGAACAAGAAGCGCGCGCCCGACGACTACTTCATCCCGCTCGT CCATCCCGTCACGGGCAAGCCCTGCCCGGTGCCCGAGCGCGGCTGGCGCAATCCGCCCGCGACCATGCGCGAGCTGCTCG AGCGCGGCCTGATCGAGTTCGGCGCCGACGAGACCACCCAGCCGCAGCGCATCTATTTCCTCGACGAGAACCGCTACGAG AACGTGCCGTCGATCCTGCCGTTCGGCGGCTCCGACGACGCGCGCCTGAAGTCGCTGGCGATCCCGTTCGACCTGCCCAA GCCCACCGACTTCGCGGCCGCGCTGATCGGCTGGCTGACGGGCGGCGAGGACCTGATCGTCGACTGTTTCGCCGGCTCCG GCACCACCGCCCACGCCACGCTGGCGGCCAACGCGGCCGACGGCGCGCGGCGCCGCTACGCGCTGGTGCAGCTGCCCGAG CCGCTCGATGCGTCGAACAAGGACCAGAAGGCCGCCGCCGAGTTCTGCGCGAAGCTCAAGCGCCCCGCCAACCTCGCCGA GATCACCAAGGAACGGCTGCGGCGCGCGGCCGAGCGGATCGCCGCCGAGCATCCCGAGGCCGCGCTCGACGTCGGCTTCC GCGTGTTCCGGCTCGATTCGACCAACGTGGTCGAATGGGACCCGCGCGGCGCGAACGTGCAACAGTCGCTGCTCGACGCG GTCGAGCACGTCAAGTCCGGCCGCACCGACGCCGACCTGCTCGCCGAACTCGCCATCAAGCTCGGCCTCGACCTCTGCGC GCCGATCGACACGCTGCCGATCGCCGGCAAGGCGGTGCACGTGATCGACGGCGCGATCGTGGCCTGCTTCGCCGCGCGCC TCGACCGCGCCGAGGCCGAGGCGCTCGCGCTCGGCATCGTCGGGGTGCTCGACGCGGTCGAGGCGCCGCCCGCGCACGAC GTGACCTGCGTGTTCCGCGACGCCGCGTTCGTCGACGACGTCGCGCGCGTGAACCTGTCCGCGATCCTCGAACAGCACGG CATCCGGTCGGTGCGGAGCCTCTGA
Upstream 100 bases:
>100_bases ATCCGCCCTGCCCGTGCGGCCCGCGCCCGTGCCGTCCAGGTTGGCCGCGGCCGCGCGGGCGGCGGCGTCGCCCCGGGGCG GCGCACCGATCATGCTTTAC
Downstream 100 bases:
>100_bases TGACGCGCCAGACCTTCGACGCGAACCTGGCCGGCGCGCCGCTCATGGAGCTGCATTTCGAGGCCGATCTCGACTACCAG CGCGAGGCCGTGGACGCCGT
Product: type III DNA modification methyltransferase
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MEDTMRKIESASPEARSADLAADNLERLKALFPEAVTEGPDGAALDLDVLKALVGDRTLGEADEKYGLAWHGKRRARQLA LTPSTGTLRPCRDESLDWDGTRNLMIEGDNLEVLKLLHKSYAGSVKLVYIDPPYNTGREFVYPDNFADSLRHYLALTGQA AGGVKLSSHTEASGRFHTDWLNMMYPRLKLAFDLLARDGLIAIHIDEHELPALVLVMREIFGEENELGVAVWDKRNPKGD ARGLAYQHESIVLFARDAEWLYQHAPLKRPKRNAQRMLDAAREAIATTGGIAEATQAYRAWLRAQTTLSGGEAMYDRLSP DGRVYRLVSMAWPNKKRAPDDYFIPLVHPVTGKPCPVPERGWRNPPATMRELLERGLIEFGADETTQPQRIYFLDENRYE NVPSILPFGGSDDARLKSLAIPFDLPKPTDFAAALIGWLTGGEDLIVDCFAGSGTTAHATLAANAADGARRRYALVQLPE PLDASNKDQKAAAEFCAKLKRPANLAEITKERLRRAAERIAAEHPEAALDVGFRVFRLDSTNVVEWDPRGANVQQSLLDA VEHVKSGRTDADLLAELAIKLGLDLCAPIDTLPIAGKAVHVIDGAIVACFAARLDRAEAEALALGIVGVLDAVEAPPAHD VTCVFRDAAFVDDVARVNLSAILEQHGIRSVRSL
Sequences:
>Translated_674_residues MEDTMRKIESASPEARSADLAADNLERLKALFPEAVTEGPDGAALDLDVLKALVGDRTLGEADEKYGLAWHGKRRARQLA LTPSTGTLRPCRDESLDWDGTRNLMIEGDNLEVLKLLHKSYAGSVKLVYIDPPYNTGREFVYPDNFADSLRHYLALTGQA AGGVKLSSHTEASGRFHTDWLNMMYPRLKLAFDLLARDGLIAIHIDEHELPALVLVMREIFGEENELGVAVWDKRNPKGD ARGLAYQHESIVLFARDAEWLYQHAPLKRPKRNAQRMLDAAREAIATTGGIAEATQAYRAWLRAQTTLSGGEAMYDRLSP DGRVYRLVSMAWPNKKRAPDDYFIPLVHPVTGKPCPVPERGWRNPPATMRELLERGLIEFGADETTQPQRIYFLDENRYE NVPSILPFGGSDDARLKSLAIPFDLPKPTDFAAALIGWLTGGEDLIVDCFAGSGTTAHATLAANAADGARRRYALVQLPE PLDASNKDQKAAAEFCAKLKRPANLAEITKERLRRAAERIAAEHPEAALDVGFRVFRLDSTNVVEWDPRGANVQQSLLDA VEHVKSGRTDADLLAELAIKLGLDLCAPIDTLPIAGKAVHVIDGAIVACFAARLDRAEAEALALGIVGVLDAVEAPPAHD VTCVFRDAAFVDDVARVNLSAILEQHGIRSVRSL >Mature_674_residues MEDTMRKIESASPEARSADLAADNLERLKALFPEAVTEGPDGAALDLDVLKALVGDRTLGEADEKYGLAWHGKRRARQLA LTPSTGTLRPCRDESLDWDGTRNLMIEGDNLEVLKLLHKSYAGSVKLVYIDPPYNTGREFVYPDNFADSLRHYLALTGQA AGGVKLSSHTEASGRFHTDWLNMMYPRLKLAFDLLARDGLIAIHIDEHELPALVLVMREIFGEENELGVAVWDKRNPKGD ARGLAYQHESIVLFARDAEWLYQHAPLKRPKRNAQRMLDAAREAIATTGGIAEATQAYRAWLRAQTTLSGGEAMYDRLSP DGRVYRLVSMAWPNKKRAPDDYFIPLVHPVTGKPCPVPERGWRNPPATMRELLERGLIEFGADETTQPQRIYFLDENRYE NVPSILPFGGSDDARLKSLAIPFDLPKPTDFAAALIGWLTGGEDLIVDCFAGSGTTAHATLAANAADGARRRYALVQLPE PLDASNKDQKAAAEFCAKLKRPANLAEITKERLRRAAERIAAEHPEAALDVGFRVFRLDSTNVVEWDPRGANVQQSLLDA VEHVKSGRTDADLLAELAIKLGLDLCAPIDTLPIAGKAVHVIDGAIVACFAARLDRAEAEALALGIVGVLDAVEAPPAHD VTCVFRDAAFVDDVARVNLSAILEQHGIRSVRSL
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 73997; Mature: 73997
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDTMRKIESASPEARSADLAADNLERLKALFPEAVTEGPDGAALDLDVLKALVGDRTLG CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCC EADEKYGLAWHGKRRARQLALTPSTGTLRPCRDESLDWDGTRNLMIEGDNLEVLKLLHKS CCHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH YAGSVKLVYIDPPYNTGREFVYPDNFADSLRHYLALTGQAAGGVKLSSHTEASGRFHTDW CCCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEHHH LNMMYPRLKLAFDLLARDGLIAIHIDEHELPALVLVMREIFGEENELGVAVWDKRNPKGD HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC ARGLAYQHESIVLFARDAEWLYQHAPLKRPKRNAQRMLDAAREAIATTGGIAEATQAYRA CCCEEEECCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WLRAQTTLSGGEAMYDRLSPDGRVYRLVSMAWPNKKRAPDDYFIPLVHPVTGKPCPVPER HHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCC GWRNPPATMRELLERGLIEFGADETTQPQRIYFLDENRYENVPSILPFGGSDDARLKSLA CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHEEE IPFDLPKPTDFAAALIGWLTGGEDLIVDCFAGSGTTAHATLAANAADGARRRYALVQLPE CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHEEEEEECCC PLDASNKDQKAAAEFCAKLKRPANLAEITKERLRRAAERIAAEHPEAALDVGFRVFRLDS CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECC TNVVEWDPRGANVQQSLLDAVEHVKSGRTDADLLAELAIKLGLDLCAPIDTLPIAGKAVH CCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEH VIDGAIVACFAARLDRAEAEALALGIVGVLDAVEAPPAHDVTCVFRDAAFVDDVARVNLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHH AILEQHGIRSVRSL HHHHHHHHHHHHCC >Mature Secondary Structure MEDTMRKIESASPEARSADLAADNLERLKALFPEAVTEGPDGAALDLDVLKALVGDRTLG CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCC EADEKYGLAWHGKRRARQLALTPSTGTLRPCRDESLDWDGTRNLMIEGDNLEVLKLLHKS CCHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH YAGSVKLVYIDPPYNTGREFVYPDNFADSLRHYLALTGQAAGGVKLSSHTEASGRFHTDW CCCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEHHH LNMMYPRLKLAFDLLARDGLIAIHIDEHELPALVLVMREIFGEENELGVAVWDKRNPKGD HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC ARGLAYQHESIVLFARDAEWLYQHAPLKRPKRNAQRMLDAAREAIATTGGIAEATQAYRA CCCEEEECCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WLRAQTTLSGGEAMYDRLSPDGRVYRLVSMAWPNKKRAPDDYFIPLVHPVTGKPCPVPER HHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCC GWRNPPATMRELLERGLIEFGADETTQPQRIYFLDENRYENVPSILPFGGSDDARLKSLA CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHEEE IPFDLPKPTDFAAALIGWLTGGEDLIVDCFAGSGTTAHATLAANAADGARRRYALVQLPE CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHEEEEEECCC PLDASNKDQKAAAEFCAKLKRPANLAEITKERLRRAAERIAAEHPEAALDVGFRVFRLDS CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECC TNVVEWDPRGANVQQSLLDAVEHVKSGRTDADLLAELAIKLGLDLCAPIDTLPIAGKAVH CCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEH VIDGAIVACFAARLDRAEAEALALGIVGVLDAVEAPPAHDVTCVFRDAAFVDDVARVNLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHH AILEQHGIRSVRSL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]