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The map label for this gene is yodT [H]

Identifier: 238025572

GI number: 238025572

Start: 2814132

End: 2815478

Strand: Reverse

Name: yodT [H]

Synonym: bglu_2g22690

Alternate gene names: 238025572

Gene position: 2815478-2814132 (Counterclockwise)

Preceding gene: 238025573

Following gene: 238025571

Centisome position: 99.58

GC content: 72.09

Gene sequence:

>1347_bases
ATGACCACGGTATTTCACCGCGCCCCGCGCGCGCGCCTGCCCGTTGCGGTGGCGGGCGACGGCATCGAGCTGATCGACGC
CGACGGCAAACGCTATCTCGACGCCTGCGGCGGCGCGGCCGTCTCGTGCCTCGGCCACGGCAACGCGCGCGTGATCGCGG
CGATCGAGCGGCAGGCGCGGCAGCTGGCCTACGCCCACACCTCGTTCTTCACCACCCCGGTGGCCGAGGAGCTGGCCGAC
CGGCTCGTCGCGGCGGCGCCGGACGGGCTCGGCCACGTCTATTTCGTGTCGGGCGGCTCGGAGGCGATCGAGGCCGCGCT
GAAGCTCGCGCGCCAGTACTTCGTCGAACTCGGCGAGCCGGCGCGGCGGCACATCATCGCGCGCCGGCAGAGCTACCACG
GCAACACGCTCGGCGCGCTCGCGATCGGCGGCAACGCATGGCGGCGCGAGCCGTTCCTGCCGCTGCTGATCGAGACGCAT
CATGTGGGCGCCTGCTATGCGTATCGCGAGCAGCGCGCTCACGAGAGCGAGGCCGCGTTCGCGCAGCGCCTCGCCGACGA
GCTCGAAGCGAAGATCCTCGAACTCGGCCCGCAGACGGTGGCCGCCTTCGTGGCGGAGACGGTGGTGGGCGCGACGGCCG
GCGCGGTGCCGCCGGTGCGCGAATATTTCCGCAAGATCCGCGCGGTCTGCGACCGCTACGGCGTGCTGCTGATCCTCGAC
GAAATCATGTCGGGGATGGGCCGCACCGGCTACCTGTTCGCCTGCGAGGAAGATGGCGTCGCGCCCGACATCGTGACGAT
CGCGAAGGGGCTGGGCGCCGGCTATCAGCCGATCGGCGCGATGCTGGCGAGCGATCGCGTCTACGACGCGATCGTCGGCG
GCACCGGCTTTTTCCAGCACGGCCACACCTACCTCGGCCACGCGATCGCCTGCGCGGCCGCGCTGGAGGTGCAGCGCGTG
ATCGCCGAGGAGCGCCTGCTCGACAACGTGCGGGCGCGCGGCGAACAGTTGCGTGCGCAACTACGCGAGCGCTTCGCCGG
CCATCCGGCCGTCGGCGACGTGCGCGGGCGCGGCCTGTTCGTCGGCGTCGAGTTCGTCGCCGATCGCGAGAGCAAGGCGA
CGTTCGCGCCGTCGCATCGCCTGCACGCGGCGCTGCGGCGCGAGGCGATGGCGCGCGGGCTGATGATCTATCCGATGGGC
GGCACGATCGACGGACGGCGCGGCGACCACGTGCTGCTCGCGCCGCCGTTCATCTGCACGGCCGCGCAGATCGAGACGAT
CGTCGAGCGTCTGGCGCTGTCGCTCGACGCCGCGCTTGCCTCGAGCGGCGCATGGCCGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTCGCGATGCGCATCGCGCGCCTGCCGTGATCGCCGCGCGCCGCACGAAGCGCGCGCCTCGCATCGAGGCGCCCTCTCTT
CCCGCACCAGGAGCCAAGCC

Downstream 100 bases:

>100_bases
TGCCCATGCCGCGCGCCGCCGGCGAACGGCGCGCGGCGGCGCACGATACTGGTCCCGCGCCCCGCCGCCCGGCTTCGCGA
AGCCGGCGGCGCGCGCGATA

Product: hypothetical protein

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTTVFHRAPRARLPVAVAGDGIELIDADGKRYLDACGGAAVSCLGHGNARVIAAIERQARQLAYAHTSFFTTPVAEELAD
RLVAAAPDGLGHVYFVSGGSEAIEAALKLARQYFVELGEPARRHIIARRQSYHGNTLGALAIGGNAWRREPFLPLLIETH
HVGACYAYREQRAHESEAAFAQRLADELEAKILELGPQTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDRYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDIVTIAKGLGAGYQPIGAMLASDRVYDAIVGGTGFFQHGHTYLGHAIACAAALEVQRV
IAEERLLDNVRARGEQLRAQLRERFAGHPAVGDVRGRGLFVGVEFVADRESKATFAPSHRLHAALRREAMARGLMIYPMG
GTIDGRRGDHVLLAPPFICTAAQIETIVERLALSLDAALASSGAWPAA

Sequences:

>Translated_448_residues
MTTVFHRAPRARLPVAVAGDGIELIDADGKRYLDACGGAAVSCLGHGNARVIAAIERQARQLAYAHTSFFTTPVAEELAD
RLVAAAPDGLGHVYFVSGGSEAIEAALKLARQYFVELGEPARRHIIARRQSYHGNTLGALAIGGNAWRREPFLPLLIETH
HVGACYAYREQRAHESEAAFAQRLADELEAKILELGPQTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDRYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDIVTIAKGLGAGYQPIGAMLASDRVYDAIVGGTGFFQHGHTYLGHAIACAAALEVQRV
IAEERLLDNVRARGEQLRAQLRERFAGHPAVGDVRGRGLFVGVEFVADRESKATFAPSHRLHAALRREAMARGLMIYPMG
GTIDGRRGDHVLLAPPFICTAAQIETIVERLALSLDAALASSGAWPAA
>Mature_447_residues
TTVFHRAPRARLPVAVAGDGIELIDADGKRYLDACGGAAVSCLGHGNARVIAAIERQARQLAYAHTSFFTTPVAEELADR
LVAAAPDGLGHVYFVSGGSEAIEAALKLARQYFVELGEPARRHIIARRQSYHGNTLGALAIGGNAWRREPFLPLLIETHH
VGACYAYREQRAHESEAAFAQRLADELEAKILELGPQTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDRYGVLLILDE
IMSGMGRTGYLFACEEDGVAPDIVTIAKGLGAGYQPIGAMLASDRVYDAIVGGTGFFQHGHTYLGHAIACAAALEVQRVI
AEERLLDNVRARGEQLRAQLRERFAGHPAVGDVRGRGLFVGVEFVADRESKATFAPSHRLHAALRREAMARGLMIYPMGG
TIDGRRGDHVLLAPPFICTAAQIETIVERLALSLDAALASSGAWPAA

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI37574042, Length=417, Percent_Identity=27.8177458033573, Blast_Score=142, Evalue=9e-34,
Organism=Homo sapiens, GI13994255, Length=375, Percent_Identity=31.2, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI226442705, Length=435, Percent_Identity=27.1264367816092, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI226442709, Length=397, Percent_Identity=27.7078085642317, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI4557809, Length=422, Percent_Identity=27.7251184834123, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI24119277, Length=424, Percent_Identity=26.4150943396226, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI284507298, Length=336, Percent_Identity=28.2738095238095, Blast_Score=104, Evalue=2e-22,
Organism=Escherichia coli, GI145693181, Length=414, Percent_Identity=31.6425120772947, Blast_Score=201, Evalue=9e-53,
Organism=Escherichia coli, GI1788044, Length=432, Percent_Identity=30.5555555555556, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI1789016, Length=415, Percent_Identity=32.5301204819277, Blast_Score=168, Evalue=7e-43,
Organism=Escherichia coli, GI1789759, Length=366, Percent_Identity=31.6939890710383, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1786991, Length=434, Percent_Identity=31.3364055299539, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787560, Length=389, Percent_Identity=31.3624678663239, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1786349, Length=367, Percent_Identity=29.9727520435967, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI32564660, Length=439, Percent_Identity=29.8405466970387, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71992977, Length=427, Percent_Identity=27.8688524590164, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI25144271, Length=421, Percent_Identity=27.3159144893112, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI25144274, Length=228, Percent_Identity=32.4561403508772, Blast_Score=117, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6324432, Length=350, Percent_Identity=32.2857142857143, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6323470, Length=446, Percent_Identity=28.47533632287, Blast_Score=139, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6324386, Length=472, Percent_Identity=23.0932203389831, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21357415, Length=436, Percent_Identity=30.2752293577982, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI28574759, Length=450, Percent_Identity=29.7777777777778, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI161085790, Length=456, Percent_Identity=29.1666666666667, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI21356575, Length=425, Percent_Identity=29.4117647058824, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281366494, Length=376, Percent_Identity=23.6702127659574, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24667139, Length=376, Percent_Identity=23.6702127659574, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24667143, Length=376, Percent_Identity=23.6702127659574, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 48034; Mature: 47902

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFHRAPRARLPVAVAGDGIELIDADGKRYLDACGGAAVSCLGHGNARVIAAIERQAR
CCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHCCCHHEEEECCCCCEEEHHHHHHHH
QLAYAHTSFFTTPVAEELADRLVAAAPDGLGHVYFVSGGSEAIEAALKLARQYFVELGEP
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCH
ARRHIIARRQSYHGNTLGALAIGGNAWRREPFLPLLIETHHVGACYAYREQRAHESEAAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHH
AQRLADELEAKILELGPQTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDRYGVLLILD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDIVTIAKGLGAGYQPIGAMLASDRVYDAIVGGTGFFQH
HHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCHHHC
GHTYLGHAIACAAALEVQRVIAEERLLDNVRARGEQLRAQLRERFAGHPAVGDVRGRGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VGVEFVADRESKATFAPSHRLHAALRREAMARGLMIYPMGGTIDGRRGDHVLLAPPFICT
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCHHHH
AAQIETIVERLALSLDAALASSGAWPAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTVFHRAPRARLPVAVAGDGIELIDADGKRYLDACGGAAVSCLGHGNARVIAAIERQAR
CCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHCCCHHEEEECCCCCEEEHHHHHHHH
QLAYAHTSFFTTPVAEELADRLVAAAPDGLGHVYFVSGGSEAIEAALKLARQYFVELGEP
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCH
ARRHIIARRQSYHGNTLGALAIGGNAWRREPFLPLLIETHHVGACYAYREQRAHESEAAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHH
AQRLADELEAKILELGPQTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDRYGVLLILD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDIVTIAKGLGAGYQPIGAMLASDRVYDAIVGGTGFFQH
HHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCHHHC
GHTYLGHAIACAAALEVQRVIAEERLLDNVRARGEQLRAQLRERFAGHPAVGDVRGRGLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VGVEFVADRESKATFAPSHRLHAALRREAMARGLMIYPMGGTIDGRRGDHVLLAPPFICT
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCHHHH
AAQIETIVERLALSLDAALASSGAWPAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]