| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025571
Identifier: 238025571
GI number: 238025571
Start: 2813392
End: 2813955
Strand: Reverse
Name: 238025571
Synonym: bglu_2g22680
Alternate gene names: NA
Gene position: 2813955-2813392 (Counterclockwise)
Preceding gene: 238025572
Following gene: 238025568
Centisome position: 99.53
GC content: 71.1
Gene sequence:
>564_bases ATGACCTCCCGCCTTCCCCCCTTCGATCGCAGCACCGCCACCGAGGCCCAGCGCGCGGTGCTCGACGAGATCCTCAGCGG CCCGCGCGGCAATCTCGACGGCCCGTTCCTCGGCTGGATCCACAGCCCGGCGCTGGCGCAGCATGCGCAGCGGCTCGGCG CGTTCTGCCGCTACGAGACCGGGCTGCCGCTGCGGCTGTCCGAACTCGCGATCTTGGCCACCGCCGCGCGCTGGCGTTCT CAGGCCGAATGGCACATCCACCATCCGATCGCGCTGCAGGCCGGCGTGCCGGCGGCGCTGGCCGAAGCGATCCGCCGCGG CGAGGCGCCGGTGTTCGACGGCGGCGCCGACAGCGACGACGCGCTGGTCTATCGCTTCGCGACCGAACTCTACGAAACGC GGCGCGTGTCCGACGCCACCTTCGAGGCGGCCCGCGCGCGTTTCGGCCTTCCGGTCGTGATCAATCTGGTCGGTCTGCTC GGCTATTACGCGCTGGTCGCGATGACGCTGAACGTGTTCGGGATGCGCGCGAACGGCCAGCAGACGCTGCCGTTCGCGGA GTGA
Upstream 100 bases:
>100_bases GCGAAGCCGGCGGCGCGCGCGATAATCGAGGCGGCTCGGCGGCCCCGGCTCCCGGCCGTTTGCCGCCGGCCCGCCCGCTT CCCGAACCCGGACTCACGAC
Downstream 100 bases:
>100_bases GGCGGCCCCGGCGGATGCCGCGCCGCGCCGCGGCCGGACTCAGTGAGCGGCCGAGGCGCTGGCCGGGGCCGCCGGCATGA CGGCGGCACCCGCGCCCGAG
Product: 4-carboxymuconolactone decarboxylase domain-containing protein
Products: NA
Alternate protein names: 4-Carboxymuconolactone Decarboxylase Domain Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTSRLPPFDRSTATEAQRAVLDEILSGPRGNLDGPFLGWIHSPALAQHAQRLGAFCRYETGLPLRLSELAILATAARWRS QAEWHIHHPIALQAGVPAALAEAIRRGEAPVFDGGADSDDALVYRFATELYETRRVSDATFEAARARFGLPVVINLVGLL GYYALVAMTLNVFGMRANGQQTLPFAE
Sequences:
>Translated_187_residues MTSRLPPFDRSTATEAQRAVLDEILSGPRGNLDGPFLGWIHSPALAQHAQRLGAFCRYETGLPLRLSELAILATAARWRS QAEWHIHHPIALQAGVPAALAEAIRRGEAPVFDGGADSDDALVYRFATELYETRRVSDATFEAARARFGLPVVINLVGLL GYYALVAMTLNVFGMRANGQQTLPFAE >Mature_186_residues TSRLPPFDRSTATEAQRAVLDEILSGPRGNLDGPFLGWIHSPALAQHAQRLGAFCRYETGLPLRLSELAILATAARWRSQ AEWHIHHPIALQAGVPAALAEAIRRGEAPVFDGGADSDDALVYRFATELYETRRVSDATFEAARARFGLPVVINLVGLLG YYALVAMTLNVFGMRANGQQTLPFAE
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20399; Mature: 20268
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRLPPFDRSTATEAQRAVLDEILSGPRGNLDGPFLGWIHSPALAQHAQRLGAFCRYET CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCC GLPLRLSELAILATAARWRSQAEWHIHHPIALQAGVPAALAEAIRRGEAPVFDGGADSDD CCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC ALVYRFATELYETRRVSDATFEAARARFGLPVVINLVGLLGYYALVAMTLNVFGMRANGQ HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTLPFAE CCCCCCC >Mature Secondary Structure TSRLPPFDRSTATEAQRAVLDEILSGPRGNLDGPFLGWIHSPALAQHAQRLGAFCRYET CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCC GLPLRLSELAILATAARWRSQAEWHIHHPIALQAGVPAALAEAIRRGEAPVFDGGADSDD CCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC ALVYRFATELYETRRVSDATFEAARARFGLPVVINLVGLLGYYALVAMTLNVFGMRANGQ HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTLPFAE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA