Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025556

Identifier: 238025556

GI number: 238025556

Start: 2794059

End: 2794754

Strand: Reverse

Name: 238025556

Synonym: bglu_2g22530

Alternate gene names: NA

Gene position: 2794754-2794059 (Counterclockwise)

Preceding gene: 238025565

Following gene: 238025555

Centisome position: 98.85

GC content: 67.39

Gene sequence:

>696_bases
ATGAAAATGGAAGATGGCCTCGCCACTTCGAACAGCGGGCTCGCGCAACTCGGCCGTCCCCGCCAGTACGAGGCAACGCG
CAAGCAGTCGGCGCGCCGCTATGTCGGCATCGCCGTCGTGCTGCTGCTGCACGTGGTGCTGATCTACGCACTGCTCAACG
GCCTCGCGACCAAGGTCGTGCAGGTGATCCAGCACCCGATCGAAACTCGCATCATCGAGCCGGTCAAGCCGCCGCCGCCG
CCGCCGATGCCCACCGTCAAGCTGCCGCCGCCGAAGTTCGCGCCGCCGCCGCCGCCGTTCGTGCCGCCGCCCGAGGTGCC
GGTGCAGGCACCGCCGCAGACGCCGATCGTGCATCAGGCCGCTCCGGTGGTGTCCGCGCCCGTCACGGCACCGCCCGTGG
CCGCGCCGCCCGCCCCCAAGCCGGTGAGCCATGAGGTCGGCGTGGTGTGCCCGAATTCGGATCAGATCCGCGGTTCGATC
CCCTATCCGAAGGAGGCGCAGGAAAACAACATCACGGGCGACGTGCTGATCGAATTCACCGTGGACGCGGACGGCAGGAT
CACCAACGAGCGCGTCGCGCAGTCGGCCGATTCGGATCTCGATCGCGCTGCGTTCAATGCGGTCAAGCGGTTCAAGTGTG
TGGCGCAGGGGCAACCGGTGCGCGTACAGGTTCCGTTCTCCTTCAATCTGAACTGA

Upstream 100 bases:

>100_bases
CGCGCGGCGCCGGTTCGTTCCGGTTATGAGACGTCGGCCCCCTCCGATCCGGAGGCGGCCGGTTACCGGGCGCATCCCGT
CCGGGGGGATGGATTTGACA

Downstream 100 bases:

>100_bases
ATTCCCTCAATCTGGATCGGGCGCCGGCAGGGCCGGCGCCAGGCGACGAAGCATCACATGTTTTCGTCAGTATAACGAAA
GAATAGGAGTTGGGTATGGC

Product: TonB-like protein

Products: NA

Alternate protein names: NB Protein; NB Family Protein; Periplasmic Protein nB

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKMEDGLATSNSGLAQLGRPRQYEATRKQSARRYVGIAVVLLLHVVLIYALLNGLATKVVQVIQHPIETRIIEPVKPPPP
PPMPTVKLPPPKFAPPPPPFVPPPEVPVQAPPQTPIVHQAAPVVSAPVTAPPVAAPPAPKPVSHEVGVVCPNSDQIRGSI
PYPKEAQENNITGDVLIEFTVDADGRITNERVAQSADSDLDRAAFNAVKRFKCVAQGQPVRVQVPFSFNLN

Sequences:

>Translated_231_residues
MKMEDGLATSNSGLAQLGRPRQYEATRKQSARRYVGIAVVLLLHVVLIYALLNGLATKVVQVIQHPIETRIIEPVKPPPP
PPMPTVKLPPPKFAPPPPPFVPPPEVPVQAPPQTPIVHQAAPVVSAPVTAPPVAAPPAPKPVSHEVGVVCPNSDQIRGSI
PYPKEAQENNITGDVLIEFTVDADGRITNERVAQSADSDLDRAAFNAVKRFKCVAQGQPVRVQVPFSFNLN
>Mature_231_residues
MKMEDGLATSNSGLAQLGRPRQYEATRKQSARRYVGIAVVLLLHVVLIYALLNGLATKVVQVIQHPIETRIIEPVKPPPP
PPMPTVKLPPPKFAPPPPPFVPPPEVPVQAPPQTPIVHQAAPVVSAPVTAPPVAAPPAPKPVSHEVGVVCPNSDQIRGSI
PYPKEAQENNITGDVLIEFTVDADGRITNERVAQSADSDLDRAAFNAVKRFKCVAQGQPVRVQVPFSFNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24803; Mature: 24803

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMEDGLATSNSGLAQLGRPRQYEATRKQSARRYVGIAVVLLLHVVLIYALLNGLATKVV
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVIQHPIETRIIEPVKPPPPPPMPTVKLPPPKFAPPPPPFVPPPEVPVQAPPQTPIVHQA
HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
APVVSAPVTAPPVAAPPAPKPVSHEVGVVCPNSDQIRGSIPYPKEAQENNITGDVLIEFT
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
VDADGRITNERVAQSADSDLDRAAFNAVKRFKCVAQGQPVRVQVPFSFNLN
ECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEECCC
>Mature Secondary Structure
MKMEDGLATSNSGLAQLGRPRQYEATRKQSARRYVGIAVVLLLHVVLIYALLNGLATKVV
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVIQHPIETRIIEPVKPPPPPPMPTVKLPPPKFAPPPPPFVPPPEVPVQAPPQTPIVHQA
HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
APVVSAPVTAPPVAAPPAPKPVSHEVGVVCPNSDQIRGSIPYPKEAQENNITGDVLIEFT
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
VDADGRITNERVAQSADSDLDRAAFNAVKRFKCVAQGQPVRVQVPFSFNLN
ECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA