| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is erg3 [H]
Identifier: 238025269
GI number: 238025269
Start: 2414594
End: 2415394
Strand: Direct
Name: erg3 [H]
Synonym: bglu_2g19410
Alternate gene names: 238025269
Gene position: 2414594-2415394 (Clockwise)
Preceding gene: 238025256
Following gene: 238025270
Centisome position: 85.4
GC content: 57.55
Gene sequence:
>801_bases ATGAGCGAATTTCTTGCCTACCTGACCACGCACGGGCTGGTGATCAGCGGCGTGGCATTCCTCGCGATCTTCGCGCTCGA AAGGGCTTTCCCGAAATACGATTACCCGCGCGACCTGAACCTCAAGCGGGTTTTCCGCAACGCGGTGGTAGGCGTGTCGT ATCGCGCGATCTTCTCGCCGGTGGTGATCGCACCGCTGATGCTCTACGTGACGCGTGACCTGCCTTATCGGCTGCCGCGC CCCGACTGGTTCACCGGCGTCACGGCATTCGTCATCGACATCTTCATCCTCGATTGCCTGAACTATTCGATTCATTATTT CGCGCACAAGATCCCGGTGCTGTGGCGGTTCCATACGCTGCACCACCTCGACACGCATATCGACTCGACCACCGGCTTCC GCCAGCATTTCGGCGAGAAATTCCTGGTGCTCGCGATTCGCCTGCCGGTGATGTACGCATTCGCGATTCCCTACAAGACC GTGATCGCCTTCGAAGTTATTTCGTTTTGCGTGACGACCTTCCACCACAGCAACATCAACATTCCGGAGCGGCTGGAGCG CGCCCTCAGCAAGCTGTTCGTGATGCCGACCTTCCACAACATCCACCACGGCCGCGAAGTCGAATACACCGATACCAACT ACGGCTTCATTTTCAGCATCTGGGATCGCCTGTTCGGAACCTATTCGATCGATTACCGTCCGCAGGCCTTCTCGAACGGC CTCGATCACCACGACGATTTCTCCGCCGCCAAGCTGTTGTACCTGCCTTTCACCACCACGCCCGTGAAGGAATGGAAGTA A
Upstream 100 bases:
>100_bases CTCCGCCGCCGGCCATGCCTGAACCGCGAAACATTCGCATTTCGACGGCTTCGGCATACCCATCATATTTCGCATAACTT ATTTACCGACGGAGTAAGAC
Downstream 100 bases:
>100_bases TTCCCCAGCCATGCCGGCACCGGCGGCTCCGCTCTCGCCCCGCGAGCGCCGCCGGCGCCGGCCACCCGATGACCGCCCCG TTGCGATACTCCTCCAGGAC
Product: Sterol desaturase
Products: NA
Alternate protein names: Sterol-C5-desaturase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSEFLAYLTTHGLVISGVAFLAIFALERAFPKYDYPRDLNLKRVFRNAVVGVSYRAIFSPVVIAPLMLYVTRDLPYRLPR PDWFTGVTAFVIDIFILDCLNYSIHYFAHKIPVLWRFHTLHHLDTHIDSTTGFRQHFGEKFLVLAIRLPVMYAFAIPYKT VIAFEVISFCVTTFHHSNINIPERLERALSKLFVMPTFHNIHHGREVEYTDTNYGFIFSIWDRLFGTYSIDYRPQAFSNG LDHHDDFSAAKLLYLPFTTTPVKEWK
Sequences:
>Translated_266_residues MSEFLAYLTTHGLVISGVAFLAIFALERAFPKYDYPRDLNLKRVFRNAVVGVSYRAIFSPVVIAPLMLYVTRDLPYRLPR PDWFTGVTAFVIDIFILDCLNYSIHYFAHKIPVLWRFHTLHHLDTHIDSTTGFRQHFGEKFLVLAIRLPVMYAFAIPYKT VIAFEVISFCVTTFHHSNINIPERLERALSKLFVMPTFHNIHHGREVEYTDTNYGFIFSIWDRLFGTYSIDYRPQAFSNG LDHHDDFSAAKLLYLPFTTTPVKEWK >Mature_265_residues SEFLAYLTTHGLVISGVAFLAIFALERAFPKYDYPRDLNLKRVFRNAVVGVSYRAIFSPVVIAPLMLYVTRDLPYRLPRP DWFTGVTAFVIDIFILDCLNYSIHYFAHKIPVLWRFHTLHHLDTHIDSTTGFRQHFGEKFLVLAIRLPVMYAFAIPYKTV IAFEVISFCVTTFHHSNINIPERLERALSKLFVMPTFHNIHHGREVEYTDTNYGFIFSIWDRLFGTYSIDYRPQAFSNGL DHHDDFSAAKLLYLPFTTTPVKEWK
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sterol desaturase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006694 [H]
Pfam domain/function: PF04116 FA_hydroxylase [H]
EC number: NA
Molecular weight: Translated: 31081; Mature: 30950
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFLAYLTTHGLVISGVAFLAIFALERAFPKYDYPRDLNLKRVFRNAVVGVSYRAIFSP CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH VVIAPLMLYVTRDLPYRLPRPDWFTGVTAFVIDIFILDCLNYSIHYFAHKIPVLWRFHTL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHLDTHIDSTTGFRQHFGEKFLVLAIRLPVMYAFAIPYKTVIAFEVISFCVTTFHHSNIN HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPERLERALSKLFVMPTFHNIHHGREVEYTDTNYGFIFSIWDRLFGTYSIDYRPQAFSNG HHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCC LDHHDDFSAAKLLYLPFTTTPVKEWK CCCCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SEFLAYLTTHGLVISGVAFLAIFALERAFPKYDYPRDLNLKRVFRNAVVGVSYRAIFSP HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH VVIAPLMLYVTRDLPYRLPRPDWFTGVTAFVIDIFILDCLNYSIHYFAHKIPVLWRFHTL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHLDTHIDSTTGFRQHFGEKFLVLAIRLPVMYAFAIPYKTVIAFEVISFCVTTFHHSNIN HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPERLERALSKLFVMPTFHNIHHGREVEYTDTNYGFIFSIWDRLFGTYSIDYRPQAFSNG HHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCC LDHHDDFSAAKLLYLPFTTTPVKEWK CCCCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]