| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yaiI [C]
Identifier: 238025256
GI number: 238025256
Start: 2400323
End: 2400808
Strand: Direct
Name: yaiI [C]
Synonym: bglu_2g19280
Alternate gene names: 238025256
Gene position: 2400323-2400808 (Clockwise)
Preceding gene: 238025255
Following gene: 238025269
Centisome position: 84.9
GC content: 72.43
Gene sequence:
>486_bases ATGCAAGTGCTGGTTGACGCGGACGCCTGCCCGGTGGTGGTCAAGGAGATGCTGTTCCGGGCCGCGCGGCGGCTCGAGAT GGGCGTCACGCTGGTGGCGAACCAGCCGCTGCGCACGCCGCCCTCGCCGTTCATCAAGGCCTTGCAGGTGCCGGCCGGAT TCGATGCGGCCGACCGGCGCATCGTCGAGCTGGCCGGAGCCGGCGACCTCGTGATCACGGCCGACATCCCGCTGGCCGCC GCCGCGCTCGACAAGGGCGCGCACGTGCTGGACCCGCGCGGCAACTGGTTCAGCCGCGAGAACATCCAGGAACGGCTGAC GATGCGCGAGGTGATGGAGCAGTTGCGCGGCTCGGGCGTCGACACCGGCGGTCCGGCGCCGTACGGCGCGCATGACAGCA AGGCGTTCGCCTCGCAGTTCGACCGCTTCCTGGCGCGCCACGCGCCCAAGCCGGCGCCCACGCCGAAGCCGGCGGCGGAC GCCTGA
Upstream 100 bases:
>100_bases GACACCGGCGCGCCGCCGGCCGCTCGGCTGGCAGCCGGCGGCACCGCCGCGGGCGGGCGCGGTAACATGCGCGCTTGCCC CTCTTTCACGGATCGATGCG
Downstream 100 bases:
>100_bases GGCCGGCCGCGCCGCGGCTCAATGGCCGAGTGACTCCGCCTGCTCGCCGCCTTGCGCCGCCTGCTGCGGCCGCACGCCCT GCTTGACCAGCAGCGCCGCG
Product: YaiI/YqxD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRRIVELAGAGDLVITADIPLAA AALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGVDTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAAD A
Sequences:
>Translated_161_residues MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRRIVELAGAGDLVITADIPLAA AALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGVDTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAAD A >Mature_161_residues MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRRIVELAGAGDLVITADIPLAA AALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGVDTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAAD A
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=56.6433566433566, Blast_Score=167, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 17248; Mature: 17248
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRR CEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHH IVELAGAGDLVITADIPLAAAALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGV HHEECCCCCEEEECCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAADA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRR CEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHH IVELAGAGDLVITADIPLAAAALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGV HHEECCCCCEEEECCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAADA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA