Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is yaiI [C]

Identifier: 238025256

GI number: 238025256

Start: 2400323

End: 2400808

Strand: Direct

Name: yaiI [C]

Synonym: bglu_2g19280

Alternate gene names: 238025256

Gene position: 2400323-2400808 (Clockwise)

Preceding gene: 238025255

Following gene: 238025269

Centisome position: 84.9

GC content: 72.43

Gene sequence:

>486_bases
ATGCAAGTGCTGGTTGACGCGGACGCCTGCCCGGTGGTGGTCAAGGAGATGCTGTTCCGGGCCGCGCGGCGGCTCGAGAT
GGGCGTCACGCTGGTGGCGAACCAGCCGCTGCGCACGCCGCCCTCGCCGTTCATCAAGGCCTTGCAGGTGCCGGCCGGAT
TCGATGCGGCCGACCGGCGCATCGTCGAGCTGGCCGGAGCCGGCGACCTCGTGATCACGGCCGACATCCCGCTGGCCGCC
GCCGCGCTCGACAAGGGCGCGCACGTGCTGGACCCGCGCGGCAACTGGTTCAGCCGCGAGAACATCCAGGAACGGCTGAC
GATGCGCGAGGTGATGGAGCAGTTGCGCGGCTCGGGCGTCGACACCGGCGGTCCGGCGCCGTACGGCGCGCATGACAGCA
AGGCGTTCGCCTCGCAGTTCGACCGCTTCCTGGCGCGCCACGCGCCCAAGCCGGCGCCCACGCCGAAGCCGGCGGCGGAC
GCCTGA

Upstream 100 bases:

>100_bases
GACACCGGCGCGCCGCCGGCCGCTCGGCTGGCAGCCGGCGGCACCGCCGCGGGCGGGCGCGGTAACATGCGCGCTTGCCC
CTCTTTCACGGATCGATGCG

Downstream 100 bases:

>100_bases
GGCCGGCCGCGCCGCGGCTCAATGGCCGAGTGACTCCGCCTGCTCGCCGCCTTGCGCCGCCTGCTGCGGCCGCACGCCCT
GCTTGACCAGCAGCGCCGCG

Product: YaiI/YqxD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRRIVELAGAGDLVITADIPLAA
AALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGVDTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAAD
A

Sequences:

>Translated_161_residues
MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRRIVELAGAGDLVITADIPLAA
AALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGVDTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAAD
A
>Mature_161_residues
MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRRIVELAGAGDLVITADIPLAA
AALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGVDTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAAD
A

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family [H]

Homologues:

Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=56.6433566433566, Blast_Score=167, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003791 [H]

Pfam domain/function: PF02639 DUF188 [H]

EC number: NA

Molecular weight: Translated: 17248; Mature: 17248

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRR
CEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHH
IVELAGAGDLVITADIPLAAAALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGV
HHEECCCCCEEEECCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAADA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQVLVDADACPVVVKEMLFRAARRLEMGVTLVANQPLRTPPSPFIKALQVPAGFDAADRR
CEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHH
IVELAGAGDLVITADIPLAAAALDKGAHVLDPRGNWFSRENIQERLTMREVMEQLRGSGV
HHEECCCCCEEEECCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DTGGPAPYGAHDSKAFASQFDRFLARHAPKPAPTPKPAADA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA