| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025231
Identifier: 238025231
GI number: 238025231
Start: 2374051
End: 2374494
Strand: Direct
Name: 238025231
Synonym: bglu_2g19030
Alternate gene names: NA
Gene position: 2374051-2374494 (Clockwise)
Preceding gene: 238025228
Following gene: 238025232
Centisome position: 83.97
GC content: 69.14
Gene sequence:
>444_bases ATGAAACCCGCGCATCGCTACCTGCCGCTGCTGCTGGCCGCCGCGGCGGTGCTGAGCCGCCCCGCCATGGCCGACAGCGA AGCCGGCGCCGCCGGCGCCAGCGTCAAGCCCAATTTCTCGCATGCGATCCCGTCCGTGCCGGGCAAGTCGCTGGTGGCGG TGGAGGTGTCGTATCCGCCGAACGGCGCCTCGCCGCCGCATCGCCACGATCACTCGGCGTTCATCTACGCCTATGTGGTG TCCGGCAGCGTGGCGAGCCAGGTGGAGGGGCAGCCCGAGCGCGTCTACCACGCGGGCGAATCGTTCTACGAAATGCCGGG CGCGCACCACGTGACGAGCCGCAACGCGAGCGCCACCGAGCCCGCGAAGCTGCTCGCGGTGTTCGTCGTCGACAGCGATC ATCGCGCCCTGACCGTCAACGATTCACCGGAGGCATCGAAATGA
Upstream 100 bases:
>100_bases GACATGCCGCCATGGTACATGGAAAAAACAGCTTTTCAGTGCTTTTTCATGAACTGCGAACGGCGCAGAATGACCGCCTG ATCCCATCGAGGAGCCTCCC
Downstream 100 bases:
>100_bases GCGAACGCATCCACTATCAACAGGCGGCGCCGGCCGGCTACAAGGCGCTCGTCGGCGTACACGCCTATGTCTCGCAGTGC GGGCTCGACGCCACGCTCGT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Domain-Containing
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKPAHRYLPLLLAAAAVLSRPAMADSEAGAAGASVKPNFSHAIPSVPGKSLVAVEVSYPPNGASPPHRHDHSAFIYAYVV SGSVASQVEGQPERVYHAGESFYEMPGAHHVTSRNASATEPAKLLAVFVVDSDHRALTVNDSPEASK
Sequences:
>Translated_147_residues MKPAHRYLPLLLAAAAVLSRPAMADSEAGAAGASVKPNFSHAIPSVPGKSLVAVEVSYPPNGASPPHRHDHSAFIYAYVV SGSVASQVEGQPERVYHAGESFYEMPGAHHVTSRNASATEPAKLLAVFVVDSDHRALTVNDSPEASK >Mature_147_residues MKPAHRYLPLLLAAAAVLSRPAMADSEAGAAGASVKPNFSHAIPSVPGKSLVAVEVSYPPNGASPPHRHDHSAFIYAYVV SGSVASQVEGQPERVYHAGESFYEMPGAHHVTSRNASATEPAKLLAVFVVDSDHRALTVNDSPEASK
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15407; Mature: 15407
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAHRYLPLLLAAAAVLSRPAMADSEAGAAGASVKPNFSHAIPSVPGKSLVAVEVSYPP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC NGASPPHRHDHSAFIYAYVVSGSVASQVEGQPERVYHAGESFYEMPGAHHVTSRNASATE CCCCCCCCCCCCEEEEEEEECCCHHHHCCCCHHHEECCCCHHHHCCCCCEECCCCCCCCC PAKLLAVFVVDSDHRALTVNDSPEASK CCEEEEEEEEECCCCEEEECCCCCCCC >Mature Secondary Structure MKPAHRYLPLLLAAAAVLSRPAMADSEAGAAGASVKPNFSHAIPSVPGKSLVAVEVSYPP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC NGASPPHRHDHSAFIYAYVVSGSVASQVEGQPERVYHAGESFYEMPGAHHVTSRNASATE CCCCCCCCCCCCEEEEEEEECCCHHHHCCCCHHHEECCCCHHHHCCCCCEECCCCCCCCC PAKLLAVFVVDSDHRALTVNDSPEASK CCEEEEEEEEECCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA