| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is rcp1 [H]
Identifier: 238025195
GI number: 238025195
Start: 2326570
End: 2327007
Strand: Direct
Name: rcp1 [H]
Synonym: bglu_2g18660
Alternate gene names: 238025195
Gene position: 2326570-2327007 (Clockwise)
Preceding gene: 238025194
Following gene: 238025206
Centisome position: 82.29
GC content: 64.38
Gene sequence:
>438_bases GTGTTAAGACCGATCCTTCTCGTGGAAGACAACCCCGACGACATCGAACTGACGATGATCGCGCTGGAGAAGACGCGGCT TGCGAATCCGGTGGTATCGGTGAGGGACGGCGAGGAAGCCCTGCAATTCCTGCGCCGCGAGGGCAAGTGGGCCGCGCGCC CCGACGAAAGCCCGGCGGTGATCCTGCTCGACAAGAAGCTGCCCAAGCTCGACGGCCACGAAGTGCTGAAGATCGTGCGC GGCGACGAGCGCCTGCGCCACATCCCGGTGGTGATGCTGACCTCCTCGCGCGAGGAGAAGGACCTGCTGCGCAGCTACGA CCTCGGCGTGAACGCCTACGTGGTGAAGCCGGTGGCGTTCGACGATTTCATGGCCGCGATCAACGATCTCGGCATGTTCT GGGCGGTGCTGAACGAGCCGCCGCCTTACCAGCGCTGA
Upstream 100 bases:
>100_bases TGCCGGCGCGCCGGCAGGCGGGCGCGCACCCTGCAATAACCGGTGGTGCCCTTGTAAAAGCGCCACACTCGAAGCAGCGA ATCAAGTCAATGGAGCAAGC
Downstream 100 bases:
>100_bases GCCGCGGCACGCCGCGCGGGGCAATCCCGAGCGGCTGACGCCGCCCCGTCCCCTGCCGAAGCGCATTGCCGGGCGGCCCC GGCCCGCCGGCCCGCCGTGG
Product: two-component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLRPILLVEDNPDDIELTMIALEKTRLANPVVSVRDGEEALQFLRREGKWAARPDESPAVILLDKKLPKLDGHEVLKIVR GDERLRHIPVVMLTSSREEKDLLRSYDLGVNAYVVKPVAFDDFMAAINDLGMFWAVLNEPPPYQR
Sequences:
>Translated_145_residues MLRPILLVEDNPDDIELTMIALEKTRLANPVVSVRDGEEALQFLRREGKWAARPDESPAVILLDKKLPKLDGHEVLKIVR GDERLRHIPVVMLTSSREEKDLLRSYDLGVNAYVVKPVAFDDFMAAINDLGMFWAVLNEPPPYQR >Mature_145_residues MLRPILLVEDNPDDIELTMIALEKTRLANPVVSVRDGEEALQFLRREGKWAARPDESPAVILLDKKLPKLDGHEVLKIVR GDERLRHIPVVMLTSSREEKDLLRSYDLGVNAYVVKPVAFDDFMAAINDLGMFWAVLNEPPPYQR
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16545; Mature: 16545
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPILLVEDNPDDIELTMIALEKTRLANPVVSVRDGEEALQFLRREGKWAARPDESPAV CCCCEEEEECCCCCEEEEEEEEEHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEE ILLDKKLPKLDGHEVLKIVRGDERLRHIPVVMLTSSREEKDLLRSYDLGVNAYVVKPVAF EEECCCCCCCCCHHHHHHHCCCCHHEECCEEEEECCCCHHHHHHHHCCCCCEEEEECCCH DDFMAAINDLGMFWAVLNEPPPYQR HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLRPILLVEDNPDDIELTMIALEKTRLANPVVSVRDGEEALQFLRREGKWAARPDESPAV CCCCEEEEECCCCCEEEEEEEEEHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEE ILLDKKLPKLDGHEVLKIVRGDERLRHIPVVMLTSSREEKDLLRSYDLGVNAYVVKPVAF EEECCCCCCCCCHHHHHHHCCCCHHEECCEEEEECCCCHHHHHHHHCCCCCEEEEECCCH DDFMAAINDLGMFWAVLNEPPPYQR HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]