| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is narK2 [H]
Identifier: 238025087
GI number: 238025087
Start: 2187773
End: 2189062
Strand: Direct
Name: narK2 [H]
Synonym: bglu_2g17430
Alternate gene names: 238025087
Gene position: 2187773-2189062 (Clockwise)
Preceding gene: 238025086
Following gene: 238025089
Centisome position: 77.38
GC content: 69.3
Gene sequence:
>1290_bases ATGACTCGTCAACTCAACCCCGGCTCGTCGCCGGATGCGCAGAAGATCCCACTGCGCGCATGGTCGGTGCTCTTCGCGAG CACGTTCGCATTCATGGTCTGTTTCGTCGTCTGGATGATGTTCGGCGTGCTGGGGGTGCAACTGCGCACCGATCTCGCGC TCAACAGCTTCGAATTCGGCCTGCTGACCGCCACGCCGGTGCTGACGGGCGCCGTGATGCGCCTGCCGCTCGGCATCTGG ACCGACCGCTTCGGCGGGCGCGTGGTGATGACCACGCTGCTGGTCGGCTGCGCGGTGCCGGTGTACGGCATCAGCTATGC GACGCAGTTCTGGCAGTTCCTCGTGATCGGCCTGTTCCTCGGCTGCGTGGGCGCCTCGTTCGCGGTCGGCACGCCCTACG TGGCGCGCTTCTTCCCGCCCAAGCGGCGCGGCTTCGCGATGGGCTTCTTCGGCGCGGGCACGGTGGGGGCGGCCGTCAAC CTGTTCGTCACGCCGTCGCTCGAAGTGGCCTACGGCTGGCGCTTCGTGCCGCGCGCGTATGCGGTGGTGCTGCTCGTCAC GGCGGCGATCTTCTGGTTCGCCTCGGCGCGCGACCCCGGCGCGGGCGCCAGGCGCGGCTCGATACTCGCCTCGTTCCGCA CGCTGCGCGACCCGCGCGTCTGGCGGCTTTGCCAGTATTACTCGGTCACGTTCGGCGGCTTCACGGCGCTCTCGCTCTGG ATCCCGCAGTACGTCACGCGCGAATACAGCGTCTCGCTGGTGGCCGCCTCGGCCTTCGCCGCCGGCTTCTCGCTGCCGGG CTCGGTGCTGCGCGCGCTCGGCGGCGCGCTGTCGGACCGCTTCGGCGCCCACGCGGTGACCTGGCACGGCCTGTGGGTCG CCTGGATCTGCCTGTTCCTGCTGTCGTATCCGACCACCGAGTTCGTGATCCGCACCATCGACGGCACGGCGCGGCTGCAC ATCGCCATGCCGCTCGCCGGCTTCCTCGTGCTGACCTTCGTGCTCGGCGTGGTGTTCGCGTTCGGCATGGCCTCCACCTT CAAGTACGTCGCCGACGATTTCCCCGACCACATGGGCGTGGTGACCGGCATCGTCGGGCTGGCGGGCGGCCTCGGCGGCT TCCTGCTGCCGGTGATGTGGGGCGCGCTGCTCGAATTCATCCCCGTGCGCACCACCTGCTTCATGCTGCTCTACGGCATC GTATGGGTGTCGCTGATCCTGCTCTACGTGTCCGGCGTGCGGCGCACGCCGCTGACCGGCGCGGTGCAGCCCGCGGGCAA GGGCGGTTGA
Upstream 100 bases:
>100_bases CCCCGCCCGACTCTGCCCTGCCCGAAATCGAGCCGGCCGCCGCGCCGCGGACGCGGTGCTGCCCCGGCGACTCTCGCCTC AATCACACGGAGTGTCGTGT
Downstream 100 bases:
>100_bases GCGGGCACGCGAGCGCACCGGCGATCGTCCGGCGGCAACGCAGGGCCCCGATCCTCCGGATCTCGACCCTGCCTACGACG ATCGCGCATCACGCATCGCG
Product: nitrate/nitrite transporter
Products: Proton [Cytoplasm]; nitrite [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTRQLNPGSSPDAQKIPLRAWSVLFASTFAFMVCFVVWMMFGVLGVQLRTDLALNSFEFGLLTATPVLTGAVMRLPLGIW TDRFGGRVVMTTLLVGCAVPVYGISYATQFWQFLVIGLFLGCVGASFAVGTPYVARFFPPKRRGFAMGFFGAGTVGAAVN LFVTPSLEVAYGWRFVPRAYAVVLLVTAAIFWFASARDPGAGARRGSILASFRTLRDPRVWRLCQYYSVTFGGFTALSLW IPQYVTREYSVSLVAASAFAAGFSLPGSVLRALGGALSDRFGAHAVTWHGLWVAWICLFLLSYPTTEFVIRTIDGTARLH IAMPLAGFLVLTFVLGVVFAFGMASTFKYVADDFPDHMGVVTGIVGLAGGLGGFLLPVMWGALLEFIPVRTTCFMLLYGI VWVSLILLYVSGVRRTPLTGAVQPAGKGG
Sequences:
>Translated_429_residues MTRQLNPGSSPDAQKIPLRAWSVLFASTFAFMVCFVVWMMFGVLGVQLRTDLALNSFEFGLLTATPVLTGAVMRLPLGIW TDRFGGRVVMTTLLVGCAVPVYGISYATQFWQFLVIGLFLGCVGASFAVGTPYVARFFPPKRRGFAMGFFGAGTVGAAVN LFVTPSLEVAYGWRFVPRAYAVVLLVTAAIFWFASARDPGAGARRGSILASFRTLRDPRVWRLCQYYSVTFGGFTALSLW IPQYVTREYSVSLVAASAFAAGFSLPGSVLRALGGALSDRFGAHAVTWHGLWVAWICLFLLSYPTTEFVIRTIDGTARLH IAMPLAGFLVLTFVLGVVFAFGMASTFKYVADDFPDHMGVVTGIVGLAGGLGGFLLPVMWGALLEFIPVRTTCFMLLYGI VWVSLILLYVSGVRRTPLTGAVQPAGKGG >Mature_428_residues TRQLNPGSSPDAQKIPLRAWSVLFASTFAFMVCFVVWMMFGVLGVQLRTDLALNSFEFGLLTATPVLTGAVMRLPLGIWT DRFGGRVVMTTLLVGCAVPVYGISYATQFWQFLVIGLFLGCVGASFAVGTPYVARFFPPKRRGFAMGFFGAGTVGAAVNL FVTPSLEVAYGWRFVPRAYAVVLLVTAAIFWFASARDPGAGARRGSILASFRTLRDPRVWRLCQYYSVTFGGFTALSLWI PQYVTREYSVSLVAASAFAAGFSLPGSVLRALGGALSDRFGAHAVTWHGLWVAWICLFLLSYPTTEFVIRTIDGTARLHI AMPLAGFLVLTFVLGVVFAFGMASTFKYVADDFPDHMGVVTGIVGLAGGLGGFLLPVMWGALLEFIPVRTTCFMLLYGIV WVSLILLYVSGVRRTPLTGAVQPAGKGG
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787743, Length=441, Percent_Identity=27.2108843537415, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787475, Length=302, Percent_Identity=26.4900662251656, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46380; Mature: 46249
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQLNPGSSPDAQKIPLRAWSVLFASTFAFMVCFVVWMMFGVLGVQLRTDLALNSFEFG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LLTATPVLTGAVMRLPLGIWTDRFGGRVVMTTLLVGCAVPVYGISYATQFWQFLVIGLFL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCVGASFAVGTPYVARFFPPKRRGFAMGFFGAGTVGAAVNLFVTPSLEVAYGWRFVPRAY HHHHCCHHCCCCHHHHCCCCCCCCCEEEECCCCCHHHEEEEEECCCEEHHHCCCHHHHHH AVVLLVTAAIFWFASARDPGAGARRGSILASFRTLRDPRVWRLCQYYSVTFGGFTALSLW HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHH IPQYVTREYSVSLVAASAFAAGFSLPGSVLRALGGALSDRFGAHAVTWHGLWVAWICLFL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH LSYPTTEFVIRTIDGTARLHIAMPLAGFLVLTFVLGVVFAFGMASTFKYVADDFPDHMGV HHCCCHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VTGIVGLAGGLGGFLLPVMWGALLEFIPVRTTCFMLLYGIVWVSLILLYVSGVRRTPLTG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AVQPAGKGG CCCCCCCCC >Mature Secondary Structure TRQLNPGSSPDAQKIPLRAWSVLFASTFAFMVCFVVWMMFGVLGVQLRTDLALNSFEFG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LLTATPVLTGAVMRLPLGIWTDRFGGRVVMTTLLVGCAVPVYGISYATQFWQFLVIGLFL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCVGASFAVGTPYVARFFPPKRRGFAMGFFGAGTVGAAVNLFVTPSLEVAYGWRFVPRAY HHHHCCHHCCCCHHHHCCCCCCCCCEEEECCCCCHHHEEEEEECCCEEHHHCCCHHHHHH AVVLLVTAAIFWFASARDPGAGARRGSILASFRTLRDPRVWRLCQYYSVTFGGFTALSLW HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHH IPQYVTREYSVSLVAASAFAAGFSLPGSVLRALGGALSDRFGAHAVTWHGLWVAWICLFL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH LSYPTTEFVIRTIDGTARLHIAMPLAGFLVLTFVLGVVFAFGMASTFKYVADDFPDHMGV HHCCCHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VTGIVGLAGGLGGFLLPVMWGALLEFIPVRTTCFMLLYGIVWVSLILLYVSGVRRTPLTG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AVQPAGKGG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitrite [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: nitrite [Cytoplasm] + Proton [Periplasm] = Proton [Cytoplasm] + nitrite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]