BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession	NC_012721
Length	2,827,333

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The map label for this gene is yjjL [H]

Identifier: 238024791

GI number: 238024791

Start: 1828542

End: 1829879

Strand: Reverse

Name: yjjL [H]

Synonym: bglu_2g14290

Alternate gene names: 238024791

Gene position: 1829879-1828542 (Counterclockwise)

Preceding gene: 238024792

Following gene: 238024789

Centisome position: 64.72

GC content: 69.73

Gene sequence:

>1338_bases
ATGAAGCCTTCCGCTCGTGCCGCGCTACCGGCCGATGCCGCGCTCGAGCCCGCCGGCGATGCCGCCTCGCCGCGCATCCG
GCGCATCCAGCGCACGGCGCTCACGTTGCTGCTGATGAGCGGCGTGGTCAACTACCTCGATCGCGCCACCCTGTCGATCG
CCACGCCGCTGATCCGCCACGACCTCGGTTTCTCGGTGCCGCAGATGGGGCTGCTGCTGTCGGCGTTCCTGTGGGCCTAC
GCGTTCGCGCAGCTGCCGGCCGGCATCCTGATCGACCGGCTCGGCGCGCGCCTGACGCTGGCCGCGAGCCTCGGGCTCTG
GTCGATCGCACAGACCTTCGGCGGCCTCGTCAACGGCTTCTCGACGTTTTTCGCCGCGCGCATGGTGCTCGGCGTCGGCG
AGGCACCGCAGTTCCCCACCAGCGCGCGGATCGTGCGCGACTGGTTCGCCGGACATGAGCGCGGCACGGCCACCGGCATC
TGGAACAGTTCCTCGACGCTGGGCACGGCGATCTCCGCGCCGCTCCTGACGCTGCTGATGCTCAACGTGGGCTGGCGCTG
GATGTTCGTGGTGATGGGGGCGGCCGGGCTGCTGCTGGCGGTGGCGTTCTATCTGCTGCACCGCGATCCGCGCCACGTCA
CGCTGACCCACCGCGAGCGCGCCTATCTCGACGACGCCGGCGGCCTCACCGGCACGCGTCCGAGCTGGGCCGACTGGCGC
CATCTGCTGCGCTATCGCAGCACCTGGGGCATGCTGCTCGGCTTCTTCGGCACGATCTACGTGCTCTGGCTCTACAACGC
CTGGTTGCCCACCTATCTGCAGATGGAGCACCACCTGACGATCGCACGCACCGGCTGGGTGGCGGCCGTGCCCTACGTGT
TCGGCGTGATCGGCAGCCTGTCGGGCGGGCGGATCTGCGACGTGCTCGCGCGTCACGGCGTATCGACCATGAACAGCCGC
AAGTATCCGATGGTCGCCTCGCTGCTCGGCATCGCGGTGTTCACGACGCTGACCGCGCTGACCGACAGCACCACGCTCGC
GGTGGTGTTCATCTCGGTGTCGATGCTGCTGATGTACATTTCGTCGAGCGCGGCCTGGGCGATGGCCTCGGTGGCCGCGC
CGGCCAACTCCACGGCCTCGATCGGCGCGATGCAGAATTTCGGCGGCTATTTCGGCGGCGCGCTGGCGCCGGTCGTGACG
GGCTTCATCGTGGCCGCCACCCACTCGTTCAAGCCGGCACTCTACGTCGGGGCCGCGGTGGTGGTGGTCGCGATGGTCGG
CTACTGGACGTTGGTGGGCGAGCCGGTGCCGCCGCGCGAGACGCAGGCGCCGCGCTGA

Upstream 100 bases:

>100_bases
GCCCTGACACGCGAGCGCTGCCGGTTGCTTTGCGGTTCGCAAGGTTACGCCCGGCCCAGCGGGCGGCCATCAGCTGAACG
AGACTGCCAGGAGACACCCG

Downstream 100 bases:

>100_bases
CGGCGATCCAGGCGGCGTGGCACGCCGCGCCGTGACTGCGCGCTTGCGCGCGCGCCTTCGGTCGCCCTGCATCCGCACCT
GGCCGAAGCCGTCGCGCGGC

Product: major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRHDLGFSVPQMGLLLSAFLWAY
AFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGFSTFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGI
WNSSSTLGTAISAPLLTLLMLNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR
HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSLSGGRICDVLARHGVSTMNSR
KYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYISSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVT
GFIVAATHSFKPALYVGAAVVVVAMVGYWTLVGEPVPPRETQAPR

Sequences:

>Translated_445_residues
MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRHDLGFSVPQMGLLLSAFLWAY
AFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGFSTFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGI
WNSSSTLGTAISAPLLTLLMLNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR
HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSLSGGRICDVLARHGVSTMNSR
KYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYISSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVT
GFIVAATHSFKPALYVGAAVVVVAMVGYWTLVGEPVPPRETQAPR
>Mature_445_residues
MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRHDLGFSVPQMGLLLSAFLWAY
AFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGFSTFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGI
WNSSSTLGTAISAPLLTLLMLNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR
HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSLSGGRICDVLARHGVSTMNSR
KYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYISSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVT
GFIVAATHSFKPALYVGAAVVVVAMVGYWTLVGEPVPPRETQAPR

Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI4885441, Length=368, Percent_Identity=23.9130434782609, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI154350196, Length=379, Percent_Identity=25.3298153034301, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI6912666, Length=374, Percent_Identity=21.6577540106952, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI9966811, Length=296, Percent_Identity=25, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI256219598, Length=399, Percent_Identity=23.0576441102757, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4503847, Length=399, Percent_Identity=23.0576441102757, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI256219483, Length=399, Percent_Identity=23.0576441102757, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI148743791, Length=355, Percent_Identity=21.9718309859155, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI9945322, Length=347, Percent_Identity=23.342939481268, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI5031955, Length=258, Percent_Identity=23.2558139534884, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI256219543, Length=421, Percent_Identity=20.4275534441805, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI21322234, Length=283, Percent_Identity=22.2614840989399, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI148728191, Length=304, Percent_Identity=22.3684210526316, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI2367379, Length=434, Percent_Identity=41.4746543778802, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI87082320, Length=428, Percent_Identity=31.5420560747664, Blast_Score=222, Evalue=5e-59,
Organism=Escherichia coli, GI1789515, Length=436, Percent_Identity=32.5688073394495, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1789152, Length=420, Percent_Identity=31.9047619047619, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI2367193, Length=414, Percent_Identity=24.6376811594203, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI87082071, Length=371, Percent_Identity=23.989218328841, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788573, Length=386, Percent_Identity=22.020725388601, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082231, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082310, Length=213, Percent_Identity=27.6995305164319, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17535049, Length=431, Percent_Identity=26.4501160092807, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115533556, Length=385, Percent_Identity=24.9350649350649, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71997452, Length=301, Percent_Identity=22.5913621262458, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17552542, Length=383, Percent_Identity=24.5430809399478, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI115533554, Length=367, Percent_Identity=25.3405994550409, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560030, Length=282, Percent_Identity=26.241134751773, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193205400, Length=318, Percent_Identity=22.6415094339623, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560966, Length=278, Percent_Identity=27.3381294964029, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17537329, Length=321, Percent_Identity=24.6105919003115, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17566884, Length=286, Percent_Identity=22.027972027972, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17509575, Length=240, Percent_Identity=22.0833333333333, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI32565914, Length=354, Percent_Identity=22.316384180791, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI32565916, Length=240, Percent_Identity=23.3333333333333, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25141316, Length=365, Percent_Identity=24.1095890410959, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25141341, Length=384, Percent_Identity=23.9583333333333, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25141318, Length=365, Percent_Identity=24.1095890410959, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71991448, Length=377, Percent_Identity=23.342175066313, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71991453, Length=377, Percent_Identity=23.342175066313, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193208223, Length=368, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI20130167, Length=425, Percent_Identity=22.1176470588235, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648416, Length=433, Percent_Identity=22.6327944572748, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI21356189, Length=433, Percent_Identity=22.6327944572748, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24583789, Length=394, Percent_Identity=24.6192893401015, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI28573299, Length=365, Percent_Identity=24.1095890410959, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24584153, Length=377, Percent_Identity=22.8116710875332, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI19922400, Length=237, Percent_Identity=26.5822784810127, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24639764, Length=338, Percent_Identity=25.4437869822485, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654215, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24653727, Length=366, Percent_Identity=23.224043715847, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24654041, Length=278, Percent_Identity=25.5395683453237, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24654037, Length=278, Percent_Identity=25.5395683453237, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI17864456, Length=280, Percent_Identity=26.0714285714286, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24654039, Length=280, Percent_Identity=26.0714285714286, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24655255, Length=363, Percent_Identity=23.4159779614325, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550460, Length=363, Percent_Identity=23.4159779614325, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920686, Length=269, Percent_Identity=24.5353159851301, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24580790, Length=361, Percent_Identity=21.8836565096953, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI20129235, Length=393, Percent_Identity=24.6819338422392, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654044, Length=211, Percent_Identity=27.4881516587678, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI20130135, Length=488, Percent_Identity=20.4918032786885, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641682, Length=283, Percent_Identity=24.3816254416961, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24655271, Length=470, Percent_Identity=20.4255319148936, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI62484226, Length=330, Percent_Identity=22.1212121212121, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI28573708, Length=269, Percent_Identity=22.6765799256506, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28573707, Length=269, Percent_Identity=22.6765799256506, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47780; Mature: 47780

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLGFSVPQMGLLLSAFLWAYAFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGF
HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
STFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGIWNSSSTLGTAISAPLLTLLM
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
LNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHHHH
HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCC
SGGRICDVLARHGVSTMNSRKYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYI
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVTGFIVAATHSFKPALYVGAAV
HCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VVVAMVGYWTLVGEPVPPRETQAPR
HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKPSARAALPADAALEPAGDAASPRIRRIQRTALTLLLMSGVVNYLDRATLSIATPLIRH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLGFSVPQMGLLLSAFLWAYAFAQLPAGILIDRLGARLTLAASLGLWSIAQTFGGLVNGF
HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
STFFAARMVLGVGEAPQFPTSARIVRDWFAGHERGTATGIWNSSSTLGTAISAPLLTLLM
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
LNVGWRWMFVVMGAAGLLLAVAFYLLHRDPRHVTLTHRERAYLDDAGGLTGTRPSWADWR
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHHHH
HLLRYRSTWGMLLGFFGTIYVLWLYNAWLPTYLQMEHHLTIARTGWVAAVPYVFGVIGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCC
SGGRICDVLARHGVSTMNSRKYPMVASLLGIAVFTTLTALTDSTTLAVVFISVSMLLMYI
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SSSAAWAMASVAAPANSTASIGAMQNFGGYFGGALAPVVTGFIVAATHSFKPALYVGAAV
HCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VVVAMVGYWTLVGEPVPPRETQAPR
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]