| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is gno [H]
Identifier: 238024735
GI number: 238024735
Start: 1758663
End: 1759436
Strand: Reverse
Name: gno [H]
Synonym: bglu_2g13720
Alternate gene names: 238024735
Gene position: 1759436-1758663 (Counterclockwise)
Preceding gene: 238024736
Following gene: 238024734
Centisome position: 62.23
GC content: 71.58
Gene sequence:
>774_bases ATGGCAGACGTGAGCACCCTGTTCCGGCTGGACGGGCGCCGTGCGCTGGTGACCCGCTCGGGACGCGGCATCGGCCTCGC ACTGGCGCGCGGACTCGCGCAAGCCGGCGCGAGCGTCGTGATCAACGATCGCAATCCCGGGAAGGCCGCCGCGCTCGCGG CCGGCTTGCGCGACGCGGGCTTCGACGCCTCGCACGCGGTGTTCGACGTGACCGACTCGGCGCAGGCCACCGCCGCGATC GACGCGTTCGAGGCCGAGGCCGGCGCCATCGAGATTCTCGTCAACAACGCGGGCATCCAGCGCCGCGCGCCGCTCGACCA GTTCGAGGACGCCGACTGGCACGCGCTGATGCGCGTCAACCTGGACGGCGCATTCATCGTCTCGCGCGCGCTGGCGCGCC ACATGATCCCGCGCGGGCGCGGCAAGATCATCAACATCTGCTCGGTGCAGAGCGAAATCGCGCGGCCCTCGATCGCGCCG TATGCGGCCTCGAAGGGCGCGCTGCGGATGCTGACCAAGGGCATGTGCGCGGACTGGGCGCGCCACGGCATCCAGGCCAA CGGCCTCGCGCCGGGCTACTTCGAGACCGAGCTGAACCAGGCGCTGGTCGCCGATCCGGCGTTCAACGACTGGATCTGCA AGCGCACGCCGGCCGGCCGCTGGGGCCGCGTCGAGGAGCTGTGCGGCGCGGCCGTGTTCCTCGCCTCGCCGGCGGCCGAT TTCATCAACGGCCAGACGCTGTTCGTCGACGGCGGCCTGACGAGCGTGGTCTGA
Upstream 100 bases:
>100_bases GCAATCACCATTGGCAAGGCCCGGCCGCCTGCGGTCTACTGGGCGTCCGTCGCAGCGCGCCGATTTCCGGCGCGCGCGGC TCGGGGATTCGGAGGCAGGC
Downstream 100 bases:
>100_bases GCGCCGCGCGTTCCGGCATGGCTGCGTTCCCGCATTGAGAATCAGGAGGAAACATCCATGAGACTGCGCTGCATGTGTCT CGTCATTCACGCGCCGAACG
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MADVSTLFRLDGRRALVTRSGRGIGLALARGLAQAGASVVINDRNPGKAAALAAGLRDAGFDASHAVFDVTDSAQATAAI DAFEAEAGAIEILVNNAGIQRRAPLDQFEDADWHALMRVNLDGAFIVSRALARHMIPRGRGKIINICSVQSEIARPSIAP YAASKGALRMLTKGMCADWARHGIQANGLAPGYFETELNQALVADPAFNDWICKRTPAGRWGRVEELCGAAVFLASPAAD FINGQTLFVDGGLTSVV
Sequences:
>Translated_257_residues MADVSTLFRLDGRRALVTRSGRGIGLALARGLAQAGASVVINDRNPGKAAALAAGLRDAGFDASHAVFDVTDSAQATAAI DAFEAEAGAIEILVNNAGIQRRAPLDQFEDADWHALMRVNLDGAFIVSRALARHMIPRGRGKIINICSVQSEIARPSIAP YAASKGALRMLTKGMCADWARHGIQANGLAPGYFETELNQALVADPAFNDWICKRTPAGRWGRVEELCGAAVFLASPAAD FINGQTLFVDGGLTSVV >Mature_256_residues ADVSTLFRLDGRRALVTRSGRGIGLALARGLAQAGASVVINDRNPGKAAALAAGLRDAGFDASHAVFDVTDSAQATAAID AFEAEAGAIEILVNNAGIQRRAPLDQFEDADWHALMRVNLDGAFIVSRALARHMIPRGRGKIINICSVQSEIARPSIAPY AASKGALRMLTKGMCADWARHGIQANGLAPGYFETELNQALVADPAFNDWICKRTPAGRWGRVEELCGAAVFLASPAADF INGQTLFVDGGLTSVV
Specific function: Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=31.0483870967742, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=30.4, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=32.421875, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=31.8548387096774, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=33.0543933054393, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=31.2, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4503301, Length=225, Percent_Identity=27.5555555555556, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=31.6017316017316, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI20149619, Length=208, Percent_Identity=34.1346153846154, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4504505, Length=195, Percent_Identity=34.3589743589744, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=28.8, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=27.8688524590164, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI210032110, Length=203, Percent_Identity=27.0935960591133, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=27.7551020408163, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7706318, Length=188, Percent_Identity=30.8510638297872, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI109715829, Length=194, Percent_Identity=31.4432989690722, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI209862901, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI19923983, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=29.1208791208791, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4758504, Length=259, Percent_Identity=29.3436293436293, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=51.9685039370079, Blast_Score=282, Evalue=1e-77, Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=38.7096774193548, Blast_Score=170, Evalue=7e-44, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=41.3654618473896, Blast_Score=163, Evalue=1e-41, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=36.9477911646586, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=32.8063241106719, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=33.6099585062241, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=34.2857142857143, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=32.3770491803279, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=30.7086614173228, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=33.195020746888, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=28.1746031746032, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=27.8884462151394, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=31.8897637795276, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=32.9317269076305, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=31.1740890688259, Blast_Score=120, Evalue=8e-28, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=29.7619047619048, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=28.6245353159851, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=29.7959183673469, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=29.4820717131474, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=30.8550185873606, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=28.2527881040892, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=29.9242424242424, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=28.1481481481481, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=29.2490118577075, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=29.1187739463602, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=28.3582089552239, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=30.5882352941176, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI72000259, Length=272, Percent_Identity=29.7794117647059, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=28.4090909090909, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=29.3233082706767, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=28.4644194756554, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=26.8292682926829, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560332, Length=273, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=27.5471698113208, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=30.9433962264151, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17562910, Length=275, Percent_Identity=26.9090909090909, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17568967, Length=211, Percent_Identity=31.2796208530806, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=25.6603773584906, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17538182, Length=266, Percent_Identity=30.8270676691729, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193203117, Length=159, Percent_Identity=27.0440251572327, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=27.5510204081633, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193203115, Length=161, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=25.3886010362694, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=188, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=34.6774193548387, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=29.4820717131474, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=30.5220883534137, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=29.5546558704453, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI28571526, Length=242, Percent_Identity=31.404958677686, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI21357041, Length=242, Percent_Identity=30.1652892561983, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=28.8617886178862, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644337, Length=173, Percent_Identity=32.9479768786127, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI18859837, Length=217, Percent_Identity=31.3364055299539, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI28574402, Length=193, Percent_Identity=30.0518134715026, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=29.0816326530612, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24584744, Length=193, Percent_Identity=30.0518134715026, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24584748, Length=193, Percent_Identity=32.1243523316062, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI161076933, Length=193, Percent_Identity=32.1243523316062, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=193, Percent_Identity=28.4974093264249, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281364892, Length=172, Percent_Identity=30.8139534883721, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640492, Length=199, Percent_Identity=23.1155778894472, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24581726, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24584752, Length=197, Percent_Identity=29.9492385786802, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 27084; Mature: 26953
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVSTLFRLDGRRALVTRSGRGIGLALARGLAQAGASVVINDRNPGKAAALAAGLRDAG CCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCC FDASHAVFDVTDSAQATAAIDAFEAEAGAIEILVNNAGIQRRAPLDQFEDADWHALMRVN CCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEEEEC LDGAFIVSRALARHMIPRGRGKIINICSVQSEIARPSIAPYAASKGALRMLTKGMCADWA CCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH RHGIQANGLAPGYFETELNQALVADPAFNDWICKRTPAGRWGRVEELCGAAVFLASPAAD HCCCCCCCCCCCHHHHHHCHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCHHH FINGQTLFVDGGLTSVV HHCCCEEEEECCHHHCC >Mature Secondary Structure ADVSTLFRLDGRRALVTRSGRGIGLALARGLAQAGASVVINDRNPGKAAALAAGLRDAG CCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCC FDASHAVFDVTDSAQATAAIDAFEAEAGAIEILVNNAGIQRRAPLDQFEDADWHALMRVN CCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEEEEC LDGAFIVSRALARHMIPRGRGKIINICSVQSEIARPSIAPYAASKGALRMLTKGMCADWA CCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH RHGIQANGLAPGYFETELNQALVADPAFNDWICKRTPAGRWGRVEELCGAAVFLASPAAD HCCCCCCCCCCCHHHHHHCHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCHHH FINGQTLFVDGGLTSVV HHCCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751271 [H]