Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238024487

Identifier: 238024487

GI number: 238024487

Start: 1388418

End: 1388756

Strand: Direct

Name: 238024487

Synonym: bglu_2g10860

Alternate gene names: NA

Gene position: 1388418-1388756 (Clockwise)

Preceding gene: 238024486

Following gene: 238024503

Centisome position: 49.11

GC content: 64.01

Gene sequence:

>339_bases
ATGAAATCGATCCATCCGGTCCCTCGGGCAGCGACCCGCATCGTGCTGCTGGCCGCACTGGCCGCTGCGCCCAGCGCGGC
CTTCGCATTCAACGAGGAGGCCAACTACAACGAATGCATTCTCAATACGGTGTCGAACACCTGGAACCGCAACGTGGTGG
AGATGATCCGCGCCTCGTGCGATCGCCTCTATCGGCGCTGGGCCATGCTCACGCCCACCGACGTTTCGTTTCATCGCTGC
CTGCTCGCGCATCTGCCTGGCGTGCAGAGCAACGCCGCGATCGGCCCGGTGGTGCAGGCGTGCCGCCGGCAGAGCACCGA
TTCTGACCATTTCGACTGA

Upstream 100 bases:

>100_bases
GGGCACGGCTCGCCGCGGCTTGCTGCGCTGCAAGCTGTCAAAGCGCTGACGCAACGCTATCATCGCCGTCCGACATCACG
CTTGCTCCGGCGGAGCGCTC

Downstream 100 bases:

>100_bases
ACCGAGCCTGCCGCCGCCAGCCGGCCCGGCAGCCGGCCCCCATCCATCGCTCACTGCTCGAAATCGCTGCCGGCCGCGCG
CAGCCGGCGCAGCGCGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKSIHPVPRAATRIVLLAALAAAPSAAFAFNEEANYNECILNTVSNTWNRNVVEMIRASCDRLYRRWAMLTPTDVSFHRC
LLAHLPGVQSNAAIGPVVQACRRQSTDSDHFD

Sequences:

>Translated_112_residues
MKSIHPVPRAATRIVLLAALAAAPSAAFAFNEEANYNECILNTVSNTWNRNVVEMIRASCDRLYRRWAMLTPTDVSFHRC
LLAHLPGVQSNAAIGPVVQACRRQSTDSDHFD
>Mature_112_residues
MKSIHPVPRAATRIVLLAALAAAPSAAFAFNEEANYNECILNTVSNTWNRNVVEMIRASCDRLYRRWAMLTPTDVSFHRC
LLAHLPGVQSNAAIGPVVQACRRQSTDSDHFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12424; Mature: 12424

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIHPVPRAATRIVLLAALAAAPSAAFAFNEEANYNECILNTVSNTWNRNVVEMIRASC
CCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DRLYRRWAMLTPTDVSFHRCLLAHLPGVQSNAAIGPVVQACRRQSTDSDHFD
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSIHPVPRAATRIVLLAALAAAPSAAFAFNEEANYNECILNTVSNTWNRNVVEMIRASC
CCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DRLYRRWAMLTPTDVSFHRCLLAHLPGVQSNAAIGPVVQACRRQSTDSDHFD
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA