| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fct [H]
Identifier: 238024463
GI number: 238024463
Start: 1352780
End: 1355158
Strand: Direct
Name: fct [H]
Synonym: bglu_2g10590
Alternate gene names: 238024463
Gene position: 1352780-1355158 (Clockwise)
Preceding gene: 238024462
Following gene: 238024464
Centisome position: 47.85
GC content: 64.02
Gene sequence:
>2379_bases GTGGGGATCAAGTTCGACAACAAGGGGATGGCCCGCAATCTCGCGGCAGTGGCAATCGCCGTGGCACAGACGTTCGCGGC GTCCGCCGCCAGTGCGCAGCAGGCGGCGCAACACACCTACCACATACCGAGCGGCCCGCTGGACCGGACCTTGGTGGAGA TCGCGAAGACCGCGCAGCTGCCGTTGAACTATGACGCGGCGCTGGTGCGCTCGCTGCAGTCGGCGCCGGTGGACGGCCAA TACTCGGCCATGGACGCGATCCGCGCGGCCTTGCGGGGCACCGGCCTCGACATGGTTCCCACGGCCAACGGCGGCTACAC GCTCACGCGTGCCAAGGCCGATGCGAAGCGGGCGGCGCCGCCGGCCGCGGCCGGCCCGGCAGGCAGCCAGGTCGACACCA CCCTGCCGCTCATCAGCGTGGCGGCCAGCCGCGATTCCAGCGGCACCGGCTTCGTCGCGGAATCGTCGTCCAGCTATGCG CGCTCGGACGTGCCGCTCAGCGAGACGCCGAAATCGGTCAGCGTCATCAACGCGGCGGTGATCCAGAGCCAGGCCGACCA GTCGCTCTCCGATGTGCTGAGGAATGCTTCCGGTGTGGTCACGCGCCCGGGGCCGCTTGGCGTGCCGCAGTACACGATTC GCGGGTTTACGGCCACCAACCTGACCTCGGACGGGCTCGCGACGGTCGGGACCGCACCCAACGTCACGCCGACGATCGCC ATCTCGCGCGTGGAAGTGGTCAAGGGACCGTCGGCGATCATGAACGGCAGCAGCCCGCCGGGGGGCGTCATCAACCTCGT CAAGAAGACGCCGCAGGCCGATCCGTTCCACGAAATCCAGGTGGGCTACGGCTCCTACGGCGACGACCAGATCGCGCTGG ACAGCACGGGCGCGATCACCAAGGACAAGAAGCTCCGGTATCGCTTCATCATCTCGGGCGAGCGCGTGGGCCAGACCCCG ATGGGATATGACGGCGAGAGAAATTTCTACTTTGCCCCGACCCTGCAATGGAAGGATTCGACCACGGATTTGACGGTCGG CTATGAGCGCACGGTCAATCGCGAGCCGGTTCCGCAGTTCACGGTCGGCTATGTCGCGGGCGATATTTACCGGAATTATA TGGACCGGCCGCTCGGCCAGCCGTCCGACCATTTCGGCGCGCAAACCGACACTGCCTTCCTCCATCTCGAGCAGAAGCTC TCGAAGTCGCTCACCTTCGTGAGCAAGGCGTCCTACTCGCGGACCCAGCAGACCCAGCAGGCCTGGGCCGTGGCCACGCC GCTCTCGGCGACCAATGGCGCCTCGTTCTACGCCTTCGATTCGATCGCGGATTACTACAATTGGAGCTTCCAGAACTACC TGCGAGCCAAGTTCGATATCGGCGCGGTGAAGAATACCGTGATCGCGGGCTGGGATCTGCTGCACTACAACCAGTATCAG GCCGATACGACACTCTTCAGACTCATTTCCGTCCCGAACATCTTCGGGCCGTTCTCGCTGCCTCCTGCCGATGCCGGCAA CCTGGCGCCGACGTTCGCGAGCAGCTACACGCAGACTGGCGTGTATCTGCAAGATCAGTTTTCCTACCGGAATTTTCATG CACTCGCCTCGGTGCGCCGCGATACCTATCTGACGAGCTCGGTCTCTGGCAGCGGCGTGGCAGGGCGGGGAACGCATCAG AACGCCTATAGTCCGAGCCTCGGCCTGCTCTACGAACTGACCACCGAGGTCTCGGCCTATGCCAGCTACAACCGCGGCTT CCAACCGGGAACGGCACCGAAGTTCGGCGGCGGAATCCTGGCCCCGCAGATCAGCCAGCAAGTCGAAGTGGGCATGAAGT TCAACCTGCTGGACGACAAGCTGGCGATCACGACCTCGGCCTACCGCACCTCGTTCAGCAACTACAACGTCGCCGATCCG CTCCATCGCGGCTTCTATCTTCCCGCCGGCGGCGCCGTCAGCCGCGGATTCGAGGCGGAGATCAGCGGCCAGCCGCTGCC CGGCGTCAACCTGATCGGCAGCTACACGTACAACGACTTCGTGCAGCCCGCGGGCACCAAGATCGCGGTGAATCTGCCCA AGAACAGCGCCAGTCTGTGGGCCACCTACAACTTCCGTTCGGAAAAGCTGCAGGGTTTCGGGGTCGGCGCGGGGCTGTTC TTCGCCAGCGGGCAGTACGTCGACACGGGATCGGCGTATCGCATTCCCAGCCAGGTGGAGACGGATCTCGGGGTGTTCTA CCGGAAGAAGGGCTATGGCCTGAATCTTTCGGTCAAGAACGTATTCAATCGCAAGCTCTACTACAGCAGCACGACGTCCT CCTTCATTCCGATGGGACCGGAGCGAACCGTCATGCTCACCGGCACCTATGATTTCTGA
Upstream 100 bases:
>100_bases TCACGGCCGCGTCGATGGGAGGCGAGGCCGGACCGGCTCGCTCAGCTGGGTGTAGTCAGGCGTTTTGCCGAAAACAACCG ATATGTGGATGGGGTGTATC
Downstream 100 bases:
>100_bases TTCCATCGAGGCCCGGCGCTGGAGCGGCCGCGTGTCCGAACCCGAGCGCCTGGCGAAGCTGCGATCGCGCTTCAGGCGCA CGGTGGTGGGGCTTGCCGTG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 791
Protein sequence:
>792_residues MGIKFDNKGMARNLAAVAIAVAQTFAASAASAQQAAQHTYHIPSGPLDRTLVEIAKTAQLPLNYDAALVRSLQSAPVDGQ YSAMDAIRAALRGTGLDMVPTANGGYTLTRAKADAKRAAPPAAAGPAGSQVDTTLPLISVAASRDSSGTGFVAESSSSYA RSDVPLSETPKSVSVINAAVIQSQADQSLSDVLRNASGVVTRPGPLGVPQYTIRGFTATNLTSDGLATVGTAPNVTPTIA ISRVEVVKGPSAIMNGSSPPGGVINLVKKTPQADPFHEIQVGYGSYGDDQIALDSTGAITKDKKLRYRFIISGERVGQTP MGYDGERNFYFAPTLQWKDSTTDLTVGYERTVNREPVPQFTVGYVAGDIYRNYMDRPLGQPSDHFGAQTDTAFLHLEQKL SKSLTFVSKASYSRTQQTQQAWAVATPLSATNGASFYAFDSIADYYNWSFQNYLRAKFDIGAVKNTVIAGWDLLHYNQYQ ADTTLFRLISVPNIFGPFSLPPADAGNLAPTFASSYTQTGVYLQDQFSYRNFHALASVRRDTYLTSSVSGSGVAGRGTHQ NAYSPSLGLLYELTTEVSAYASYNRGFQPGTAPKFGGGILAPQISQQVEVGMKFNLLDDKLAITTSAYRTSFSNYNVADP LHRGFYLPAGGAVSRGFEAEISGQPLPGVNLIGSYTYNDFVQPAGTKIAVNLPKNSASLWATYNFRSEKLQGFGVGAGLF FASGQYVDTGSAYRIPSQVETDLGVFYRKKGYGLNLSVKNVFNRKLYYSSTTSSFIPMGPERTVMLTGTYDF
Sequences:
>Translated_792_residues MGIKFDNKGMARNLAAVAIAVAQTFAASAASAQQAAQHTYHIPSGPLDRTLVEIAKTAQLPLNYDAALVRSLQSAPVDGQ YSAMDAIRAALRGTGLDMVPTANGGYTLTRAKADAKRAAPPAAAGPAGSQVDTTLPLISVAASRDSSGTGFVAESSSSYA RSDVPLSETPKSVSVINAAVIQSQADQSLSDVLRNASGVVTRPGPLGVPQYTIRGFTATNLTSDGLATVGTAPNVTPTIA ISRVEVVKGPSAIMNGSSPPGGVINLVKKTPQADPFHEIQVGYGSYGDDQIALDSTGAITKDKKLRYRFIISGERVGQTP MGYDGERNFYFAPTLQWKDSTTDLTVGYERTVNREPVPQFTVGYVAGDIYRNYMDRPLGQPSDHFGAQTDTAFLHLEQKL SKSLTFVSKASYSRTQQTQQAWAVATPLSATNGASFYAFDSIADYYNWSFQNYLRAKFDIGAVKNTVIAGWDLLHYNQYQ ADTTLFRLISVPNIFGPFSLPPADAGNLAPTFASSYTQTGVYLQDQFSYRNFHALASVRRDTYLTSSVSGSGVAGRGTHQ NAYSPSLGLLYELTTEVSAYASYNRGFQPGTAPKFGGGILAPQISQQVEVGMKFNLLDDKLAITTSAYRTSFSNYNVADP LHRGFYLPAGGAVSRGFEAEISGQPLPGVNLIGSYTYNDFVQPAGTKIAVNLPKNSASLWATYNFRSEKLQGFGVGAGLF FASGQYVDTGSAYRIPSQVETDLGVFYRKKGYGLNLSVKNVFNRKLYYSSTTSSFIPMGPERTVMLTGTYDF >Mature_791_residues GIKFDNKGMARNLAAVAIAVAQTFAASAASAQQAAQHTYHIPSGPLDRTLVEIAKTAQLPLNYDAALVRSLQSAPVDGQY SAMDAIRAALRGTGLDMVPTANGGYTLTRAKADAKRAAPPAAAGPAGSQVDTTLPLISVAASRDSSGTGFVAESSSSYAR SDVPLSETPKSVSVINAAVIQSQADQSLSDVLRNASGVVTRPGPLGVPQYTIRGFTATNLTSDGLATVGTAPNVTPTIAI SRVEVVKGPSAIMNGSSPPGGVINLVKKTPQADPFHEIQVGYGSYGDDQIALDSTGAITKDKKLRYRFIISGERVGQTPM GYDGERNFYFAPTLQWKDSTTDLTVGYERTVNREPVPQFTVGYVAGDIYRNYMDRPLGQPSDHFGAQTDTAFLHLEQKLS KSLTFVSKASYSRTQQTQQAWAVATPLSATNGASFYAFDSIADYYNWSFQNYLRAKFDIGAVKNTVIAGWDLLHYNQYQA DTTLFRLISVPNIFGPFSLPPADAGNLAPTFASSYTQTGVYLQDQFSYRNFHALASVRRDTYLTSSVSGSGVAGRGTHQN AYSPSLGLLYELTTEVSAYASYNRGFQPGTAPKFGGGILAPQISQQVEVGMKFNLLDDKLAITTSAYRTSFSNYNVADPL HRGFYLPAGGAVSRGFEAEISGQPLPGVNLIGSYTYNDFVQPAGTKIAVNLPKNSASLWATYNFRSEKLQGFGVGAGLFF ASGQYVDTGSAYRIPSQVETDLGVFYRKKGYGLNLSVKNVFNRKLYYSSTTSSFIPMGPERTVMLTGTYDF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=756, Percent_Identity=26.0582010582011, Blast_Score=171, Evalue=2e-43, Organism=Escherichia coli, GI1787344, Length=725, Percent_Identity=23.3103448275862, Blast_Score=119, Evalue=7e-28, Organism=Escherichia coli, GI1787024, Length=710, Percent_Identity=25.0704225352113, Blast_Score=98, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84907; Mature: 84776
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKFDNKGMARNLAAVAIAVAQTFAASAASAQQAAQHTYHIPSGPLDRTLVEIAKTAQL CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCC PLNYDAALVRSLQSAPVDGQYSAMDAIRAALRGTGLDMVPTANGGYTLTRAKADAKRAAP CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHHCCC PAAAGPAGSQVDTTLPLISVAASRDSSGTGFVAESSSSYARSDVPLSETPKSVSVINAAV CCCCCCCCCCCCCHHHEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH IQSQADQSLSDVLRNASGVVTRPGPLGVPQYTIRGFTATNLTSDGLATVGTAPNVTPTIA HHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECEEECCCCCCCCEECCCCCCCCCEEE ISRVEVVKGPSAIMNGSSPPGGVINLVKKTPQADPFHEIQVGYGSYGDDQIALDSTGAIT EEEEEEECCCHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC KDKKLRYRFIISGERVGQTPMGYDGERNFYFAPTLQWKDSTTDLTVGYERTVNREPVPQF CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECHHHCCCCCCCCCE TVGYVAGDIYRNYMDRPLGQPSDHFGAQTDTAFLHLEQKLSKSLTFVSKASYSRTQQTQQ EHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAVATPLSATNGASFYAFDSIADYYNWSFQNYLRAKFDIGAVKNTVIAGWDLLHYNQYQ HHEEECCCCCCCCCCEEEHHHHHHHHCCCHHHHHHEEEECCHHHCEEEECEEEEECCCCC ADTTLFRLISVPNIFGPFSLPPADAGNLAPTFASSYTQTGVYLQDQFSYRNFHALASVRR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHH DTYLTSSVSGSGVAGRGTHQNAYSPSLGLLYELTTEVSAYASYNRGFQPGTAPKFGGGIL HHEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC APQISQQVEVGMKFNLLDDKLAITTSAYRTSFSNYNVADPLHRGFYLPAGGAVSRGFEAE CCHHHHHHHCCEEEEEECCCEEEEEHHHHHCCCCCCCCCHHHCCEECCCCCHHCCCCEEC ISGQPLPGVNLIGSYTYNDFVQPAGTKIAVNLPKNSASLWATYNFRSEKLQGFGVGAGLF CCCCCCCCCEEEECCCHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEECCEEHE FASGQYVDTGSAYRIPSQVETDLGVFYRKKGYGLNLSVKNVFNRKLYYSSTTSSFIPMGP EECCCEEECCCCEECCCHHHHHHHHEEECCCCCEEEEHHHHHCCEEEEECCCCCCCCCCC ERTVMLTGTYDF CCEEEEEECCCC >Mature Secondary Structure GIKFDNKGMARNLAAVAIAVAQTFAASAASAQQAAQHTYHIPSGPLDRTLVEIAKTAQL CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCC PLNYDAALVRSLQSAPVDGQYSAMDAIRAALRGTGLDMVPTANGGYTLTRAKADAKRAAP CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHHCCC PAAAGPAGSQVDTTLPLISVAASRDSSGTGFVAESSSSYARSDVPLSETPKSVSVINAAV CCCCCCCCCCCCCHHHEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH IQSQADQSLSDVLRNASGVVTRPGPLGVPQYTIRGFTATNLTSDGLATVGTAPNVTPTIA HHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECEEECCCCCCCCEECCCCCCCCCEEE ISRVEVVKGPSAIMNGSSPPGGVINLVKKTPQADPFHEIQVGYGSYGDDQIALDSTGAIT EEEEEEECCCHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC KDKKLRYRFIISGERVGQTPMGYDGERNFYFAPTLQWKDSTTDLTVGYERTVNREPVPQF CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECHHHCCCCCCCCCE TVGYVAGDIYRNYMDRPLGQPSDHFGAQTDTAFLHLEQKLSKSLTFVSKASYSRTQQTQQ EHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAVATPLSATNGASFYAFDSIADYYNWSFQNYLRAKFDIGAVKNTVIAGWDLLHYNQYQ HHEEECCCCCCCCCCEEEHHHHHHHHCCCHHHHHHEEEECCHHHCEEEECEEEEECCCCC ADTTLFRLISVPNIFGPFSLPPADAGNLAPTFASSYTQTGVYLQDQFSYRNFHALASVRR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHH DTYLTSSVSGSGVAGRGTHQNAYSPSLGLLYELTTEVSAYASYNRGFQPGTAPKFGGGIL HHEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC APQISQQVEVGMKFNLLDDKLAITTSAYRTSFSNYNVADPLHRGFYLPAGGAVSRGFEAE CCHHHHHHHCCEEEEEECCCEEEEEHHHHHCCCCCCCCCHHHCCEECCCCCHHCCCCEEC ISGQPLPGVNLIGSYTYNDFVQPAGTKIAVNLPKNSASLWATYNFRSEKLQGFGVGAGLF CCCCCCCCCEEEECCCHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEECCEEHE FASGQYVDTGSAYRIPSQVETDLGVFYRKKGYGLNLSVKNVFNRKLYYSSTTSSFIPMGP EECCCEEECCCCEECCCHHHHHHHHEEECCCCCEEEEHHHHHCCEEEEECCCCCCCCCCC ERTVMLTGTYDF CCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]