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The map label for this gene is soxA [H]

Identifier: 238024431

GI number: 238024431

Start: 1314474

End: 1315862

Strand: Reverse

Name: soxA [H]

Synonym: bglu_2g10270

Alternate gene names: 238024431

Gene position: 1315862-1314474 (Counterclockwise)

Preceding gene: 238024432

Following gene: 238024430

Centisome position: 46.54

GC content: 71.63

Gene sequence:

>1389_bases
ATGACGACCCGCAAGCCGATCCGCCTGAACGCATTCGACATGAACTGCGTGGGCCACATCAACCACGGCCTCTGGACGCA
CCCGCGCGACCGCTCGGCCGAATACCATACGCTCGCCTACTGGACCGACCTGGCGCGCCTGCTCGAACGCGGGCTGTTCG
ACGGCCTGTTCATCGCCGACATCGTCGGCGTCTACGACGTGTACGGCGGCTCGCTCGACCTCACGCTGCGCGAATCGATC
CAGCTGCCCGTCAACGATCCGATGCTGCTGGTCTCGGCGATGGCCGCCGCCACGCGCCATCTCGGCTTCGGCATCACCGT
CAACCTGAGCTGCGAGGCGCCCTACCTGCTCGCGCGCCGCTTCTCGACGCTCGACCACCTGAGCGGCGGGCGCATCGGCT
GGAATATCGTGACCGGCTACCTCGACAGCGCCGCGCGCGCGACGGGCCTGACCGGCCAGATCGCGCACGACGAGCGCTAT
GCGCGCGCCGATGAATATCTCGAGGTGCTCTACCAGCTCTGGGAAGGCAGCTGGGAAGACGGCGCGGTGCGGCGCGACCG
GGCCGCGCGCGTGTTCGCCGACCCGGCGAAGGTGCATCGCATCACGCATCGCGGCCGCTTCTACGAGGTGGACGGCTACC
ATCTCGCCGAGCCTTCGCCGCAGCGCACGCCGGTGCTGTTCCAGGCCGGCTCGTCGCGGCGCGGCCAGGCGTTCGCGGCG
CGCCACGCCGAATGCGTGTTCATTTCGAGCGGCAGCCGCGAAGGCACGCGCCAGCTGGTGGCCGCGCTGCGGCGGCAGGC
GGCCGAGGCGGGACGCGACCCGGGCGCCCTGAAGATCTTCATGGGCGTGACGGTGGTCGTGGGCCGCAGCGAGGCCGAGG
CACGCGACAAGTACGCCGACTACGCGCGCCACGCGAGCCCCGAGGCCGGCCTCGCGCATTTCGCGGCCGGCACCGGGGTG
GACTACGCGGCCTTCGCGCTCGACGACGAGATCACGCCGGCCGACGGCAGCAAGCCGCGCGGCATCGAATCGTCGCTGCA
GCGCGCGACCGACGGCCGGCGCGGCACGACCGTGCGCGACCTGCTCGGCCAGATGACGCTCGGCGGCCGCTACGCGACCA
TCGTCGGCGACCCGGTGCAGGTGGCCGACGCCCTGACCGGCTGGATCGACGACACCGACATCGACGGCTTCAACCTCACC
CGCACCGTCACGCCGGAAAGCTACGAGGACTTCATCGACCTGGTGGTCCCCGAGCTGCAAGCGCGCGGCCGCTACAAGCG
TGCCTACGCCGACGGCACGCTGCGCGAGAAGCTGTTCGGCGCCGGCCCGACGCTGCCCGCCACGCACGCGGGCGCCGGCT
ACCGGCGGGCCCCCTCCGATCCGGCGTAG

Upstream 100 bases:

>100_bases
CGGGACGGCAAAGCTAATCACCAATCCTTGGTTGCCGCGCCCCCGCCCGCATGCCATGCTCGCCGGTTTCGATCACCCGC
TCCGGCGCGCCGCCCCGACG

Downstream 100 bases:

>100_bases
CGCGGCGCCGGGCGGCCCGCTCGCGCAATCCAGCCTGTCACGCCCGAGCCGGCCAGCAGACCGCTCGCCTCGGGTGCCGC
CTTCGCCCCCGGCCGAGCGC

Product: putative monooxygenase, DszA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTTRKPIRLNAFDMNCVGHINHGLWTHPRDRSAEYHTLAYWTDLARLLERGLFDGLFIADIVGVYDVYGGSLDLTLRESI
QLPVNDPMLLVSAMAAATRHLGFGITVNLSCEAPYLLARRFSTLDHLSGGRIGWNIVTGYLDSAARATGLTGQIAHDERY
ARADEYLEVLYQLWEGSWEDGAVRRDRAARVFADPAKVHRITHRGRFYEVDGYHLAEPSPQRTPVLFQAGSSRRGQAFAA
RHAECVFISSGSREGTRQLVAALRRQAAEAGRDPGALKIFMGVTVVVGRSEAEARDKYADYARHASPEAGLAHFAAGTGV
DYAAFALDDEITPADGSKPRGIESSLQRATDGRRGTTVRDLLGQMTLGGRYATIVGDPVQVADALTGWIDDTDIDGFNLT
RTVTPESYEDFIDLVVPELQARGRYKRAYADGTLREKLFGAGPTLPATHAGAGYRRAPSDPA

Sequences:

>Translated_462_residues
MTTRKPIRLNAFDMNCVGHINHGLWTHPRDRSAEYHTLAYWTDLARLLERGLFDGLFIADIVGVYDVYGGSLDLTLRESI
QLPVNDPMLLVSAMAAATRHLGFGITVNLSCEAPYLLARRFSTLDHLSGGRIGWNIVTGYLDSAARATGLTGQIAHDERY
ARADEYLEVLYQLWEGSWEDGAVRRDRAARVFADPAKVHRITHRGRFYEVDGYHLAEPSPQRTPVLFQAGSSRRGQAFAA
RHAECVFISSGSREGTRQLVAALRRQAAEAGRDPGALKIFMGVTVVVGRSEAEARDKYADYARHASPEAGLAHFAAGTGV
DYAAFALDDEITPADGSKPRGIESSLQRATDGRRGTTVRDLLGQMTLGGRYATIVGDPVQVADALTGWIDDTDIDGFNLT
RTVTPESYEDFIDLVVPELQARGRYKRAYADGTLREKLFGAGPTLPATHAGAGYRRAPSDPA
>Mature_461_residues
TTRKPIRLNAFDMNCVGHINHGLWTHPRDRSAEYHTLAYWTDLARLLERGLFDGLFIADIVGVYDVYGGSLDLTLRESIQ
LPVNDPMLLVSAMAAATRHLGFGITVNLSCEAPYLLARRFSTLDHLSGGRIGWNIVTGYLDSAARATGLTGQIAHDERYA
RADEYLEVLYQLWEGSWEDGAVRRDRAARVFADPAKVHRITHRGRFYEVDGYHLAEPSPQRTPVLFQAGSSRRGQAFAAR
HAECVFISSGSREGTRQLVAALRRQAAEAGRDPGALKIFMGVTVVVGRSEAEARDKYADYARHASPEAGLAHFAAGTGVD
YAAFALDDEITPADGSKPRGIESSLQRATDGRRGTTVRDLLGQMTLGGRYATIVGDPVQVADALTGWIDDTDIDGFNLTR
TVTPESYEDFIDLVVPELQARGRYKRAYADGTLREKLFGAGPTLPATHAGAGYRRAPSDPA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=224, Percent_Identity=29.0178571428571, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 50583; Mature: 50452

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRKPIRLNAFDMNCVGHINHGLWTHPRDRSAEYHTLAYWTDLARLLERGLFDGLFIAD
CCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHH
IVGVYDVYGGSLDLTLRESIQLPVNDPMLLVSAMAAATRHLGFGITVNLSCEAPYLLARR
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH
FSTLDHLSGGRIGWNIVTGYLDSAARATGLTGQIAHDERYARADEYLEVLYQLWEGSWED
HHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GAVRRDRAARVFADPAKVHRITHRGRFYEVDGYHLAEPSPQRTPVLFQAGSSRRGQAFAA
CCCCHHCHHHHHCCHHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCHHHH
RHAECVFISSGSREGTRQLVAALRRQAAEAGRDPGALKIFMGVTVVVGRSEAEARDKYAD
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHH
YARHASPEAGLAHFAAGTGVDYAAFALDDEITPADGSKPRGIESSLQRATDGRRGTTVRD
HHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
LLGQMTLGGRYATIVGDPVQVADALTGWIDDTDIDGFNLTRTVTPESYEDFIDLVVPELQ
HHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
ARGRYKRAYADGTLREKLFGAGPTLPATHAGAGYRRAPSDPA
HCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTRKPIRLNAFDMNCVGHINHGLWTHPRDRSAEYHTLAYWTDLARLLERGLFDGLFIAD
CCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHH
IVGVYDVYGGSLDLTLRESIQLPVNDPMLLVSAMAAATRHLGFGITVNLSCEAPYLLARR
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH
FSTLDHLSGGRIGWNIVTGYLDSAARATGLTGQIAHDERYARADEYLEVLYQLWEGSWED
HHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GAVRRDRAARVFADPAKVHRITHRGRFYEVDGYHLAEPSPQRTPVLFQAGSSRRGQAFAA
CCCCHHCHHHHHCCHHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCHHHH
RHAECVFISSGSREGTRQLVAALRRQAAEAGRDPGALKIFMGVTVVVGRSEAEARDKYAD
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHH
YARHASPEAGLAHFAAGTGVDYAAFALDDEITPADGSKPRGIESSLQRATDGRRGTTVRD
HHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
LLGQMTLGGRYATIVGDPVQVADALTGWIDDTDIDGFNLTRTVTPESYEDFIDLVVPELQ
HHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
ARGRYKRAYADGTLREKLFGAGPTLPATHAGAGYRRAPSDPA
HCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]