| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024430
Identifier: 238024430
GI number: 238024430
Start: 1313407
End: 1313898
Strand: Reverse
Name: 238024430
Synonym: bglu_2g10260
Alternate gene names: NA
Gene position: 1313898-1313407 (Counterclockwise)
Preceding gene: 238024431
Following gene: 238024425
Centisome position: 46.47
GC content: 51.02
Gene sequence:
>492_bases ATGAATAATTTTATGCAATCCATAAAATTCAAGATCCTGGCATCAATGGTTTTTTGTTTTTTCCTCATGCTGGTCATCAG TATTTTCGGAATCTCCGCCATCTTTGAAATGAGGAAAAACGTCAGGGAATCCTATACTGAAGTGACCGTCCCGATCCAGG ATCTGGCGGAAATTCGGGCAACGCAACTCGATATCCGGCTTCAATTCAGAAGAATACAGGCATTCCGCGAGCCGCAGAAA ACACAAACGGCCGTGGATGCCGTCAAGCTGGATCTGGCGACCATGAAAAAAGCCTGGGCGGACTACTATCCGCTGCACGT CAGCAGCCCGCAGGAAAAATCGGTGGCGGACGCGATCGACGCCGGCCTGCCCGATTTTCAGAAGCTCACGGAACACATCA CGGATCTTTTCGCCAGCGGCAACTATGATGGCGCGGCGGAAATGGTCGATCAGCACGCGAACGCCTCCACCGAATTAGAG CCGCTAACATAA
Upstream 100 bases:
>100_bases CGTTTACCGCACCTCACGCCAATGCCCCGGCGCAACGCAACGAGGCGGGCAGCGTCGCCTGGCTGGTCTGCCACAGAACG TCAACGAGAAAGGAAGGGAT
Downstream 100 bases:
>100_bases CCTAGACATGACGTAGCAGAAGTCGTATCGTCTGCGATATGGCAAGACGCAAAATCAGCAACGAGTTGTGGGTGGAGCTG GAACCGCTGATTCCGGAATT
Product: putative methyl-accepting chemotaxis transducer transmembrane protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Transducer Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNNFMQSIKFKILASMVFCFFLMLVISIFGISAIFEMRKNVRESYTEVTVPIQDLAEIRATQLDIRLQFRRIQAFREPQK TQTAVDAVKLDLATMKKAWADYYPLHVSSPQEKSVADAIDAGLPDFQKLTEHITDLFASGNYDGAAEMVDQHANASTELE PLT
Sequences:
>Translated_163_residues MNNFMQSIKFKILASMVFCFFLMLVISIFGISAIFEMRKNVRESYTEVTVPIQDLAEIRATQLDIRLQFRRIQAFREPQK TQTAVDAVKLDLATMKKAWADYYPLHVSSPQEKSVADAIDAGLPDFQKLTEHITDLFASGNYDGAAEMVDQHANASTELE PLT >Mature_163_residues MNNFMQSIKFKILASMVFCFFLMLVISIFGISAIFEMRKNVRESYTEVTVPIQDLAEIRATQLDIRLQFRRIQAFREPQK TQTAVDAVKLDLATMKKAWADYYPLHVSSPQEKSVADAIDAGLPDFQKLTEHITDLFASGNYDGAAEMVDQHANASTELE PLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18470; Mature: 18470
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFMQSIKFKILASMVFCFFLMLVISIFGISAIFEMRKNVRESYTEVTVPIQDLAEIRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TQLDIRLQFRRIQAFREPQKTQTAVDAVKLDLATMKKAWADYYPLHVSSPQEKSVADAID HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AGLPDFQKLTEHITDLFASGNYDGAAEMVDQHANASTELEPLT CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNNFMQSIKFKILASMVFCFFLMLVISIFGISAIFEMRKNVRESYTEVTVPIQDLAEIRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TQLDIRLQFRRIQAFREPQKTQTAVDAVKLDLATMKKAWADYYPLHVSSPQEKSVADAID HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AGLPDFQKLTEHITDLFASGNYDGAAEMVDQHANASTELEPLT CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA