| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is plcN [H]
Identifier: 238024428
GI number: 238024428
Start: 1309222
End: 1311291
Strand: Direct
Name: plcN [H]
Synonym: bglu_2g10230
Alternate gene names: 238024428
Gene position: 1309222-1311291 (Clockwise)
Preceding gene: 238024427
Following gene: 238024429
Centisome position: 46.31
GC content: 63.09
Gene sequence:
>2070_bases ATGAAATCGAATCGCCGGGACTTTATAAAAAAATCGGCAAAGGTGCTTGGGGCAGCGGGCGCGATATCTCTCTTGCCGGC CAGCATCCGGCGCGCCCTCGCCATCCCTGCCTCGTCGAAGACAGGCACGATCAATGATGTCGAGCACGTGGTCGTGCTCA TGCAGGAAAATCGCTCGTTCGATCACTATCTTGGGCATCACGCGGGATTTCGCGGATTCAACGACAGATCGACGCTTCCC GTCGATGCCCAAGCCTCGATCTTCAATCAGCCCGACGGACAGGGTGGCTACGTAACGACTTTCCATCTCGATAGTAATGC CACGCGCGCGCAAACCATCAGCTCGCTGCCGCACGGCTGGTCGGACGGCCATGCGGCCTGGAACGACGGCCGCTGGGATA ATTGGGTGCCCGCTAAAGGGGGGCTCACCATGGGGCATTTCGCGCGCAACGACATTCCCTTTCACTACGCGTTGGCCGAC GCGTTTACGGTATGCGACGCGTATTTTGCATCCTGCCTGGGGCCGACCAACACCAATCGTCTTCATCTGATGACCGGCAT GATCGACGTCGCCGGCACCGGCGGCGGACCACTGATCGACAACACGCCGGCCCATGTCTTCACGTGGACGACGTACCCGG AGCGGCTGCAAAAGGCCGGAGTCAGCTGGCGCGTGTACCAAGGCTCGGACGGTAGCGAGCCGTTCAGGACCTCGCTGACG CCCAACCCCGCGGGTTCGACGAACCTCGACTACCCGAATCCGTACAACGTACTGAATTTCTTCCAAGCCTATACCGCCGC CGATGCCGATCCGGCGCTCGTCGCGAATGCCACGACGAAGCGAACCCTGGCCGAGCTGACGAACGACGTCAAAGCCGGCA CGCTCCCCCAGGTCTCCTGGCTCTTGCCTCCCTACCTCTGTTCGGAGCATCCGGCCCGCTCGCCGGCGGACGGTGCGACA TACATCGCCGCCGTGCTGGATGCCTTGACGTCGAATCCGGATACCTGGAGCAAAACCGCGCTGTTCATTACCTACGATGA AAACGACGGTTTCTTCGACCACGTCGTTCCGCCGTCGCCGCCGATGTCGAGCCGTGAGGGCTTGTCGAATGTTGCCACCG CCAACGAGTTCTATGCGGGCAGCAGCACCAATCCATCCGGCCCGGTCGGGCTGGGCGCGCGGGTGCCGATGTTCGTCGTC TCCCCGTGGTCCAAGGGAGCCTGGACCTGCTCCGAGGTATTCGATCACACCTCCATCATCAAATTCATCGAGAAGCGCTT CGGCGTCGTGGAGCCCAACATCAGCGCCTGGCGCCGCGCGATTTGTGGCGATCTGACGTCCGCCTTCGACTTCACGAGCC CTGATGCGAGCGCCGTGTCGGTGCCTTCCGTGGCGGGATTGAGTGCCGCCGCGGCAGCCCAGAGCACGCTTGCGCCACCC ACCGTGCCCGTCACCCAGGTGCCGTCGCAACAGGAGCGGGGCAGCCGGAACGCGCGTGCGCTTCCCTATGAGCTGTTTGT CGATGCGGCTCAAGACCTGAGCGCGTCGACCATCACGCTGAGCTTCATCAACACGGGCAGTGTCGCGGCCGGCTTTGCCG TGTATTCGGCAGGCACGCCGACATCGGTCAAACGCTATACGGTGGACGCAAACAGCAAGTTGTCCGACAGTTGGCGCTTT GCCGGCGGGGCAGCGGTGGCCTCGGCCTATGACTTGACGGTGATCGCGCCGAACGGCTTCGTCCGCCGCTTTGTTTCGTC GGGCACGAGCGCGAGCAGCCAAGAAGCGACCGTCTGTTATGAAGTCACCGCCGGCGACCTTGCCGTCAACCTGGTCAACA CCGGCAAAGCCGGCGTGACGTTCCGGATCACGGACAATCGCTACGGTGTCGCTGCGCAATCGGTGAGCGTGGCGGCCGGC CAAACGGTCCAGGTGCCATGGTCGCTGGCTGCCAGCAAGAGGTGGTACGACCTCGGCATCACTTGCGATGCCGACGCGCG CTTCCTGCGCCAGTTCGCGGGACACGTCGAAATCGGTGCGCCGGGGGTCACCGATCCTTCGATGGCCTAG
Upstream 100 bases:
>100_bases TTGCGGGGTGCGGCGGCAGTGACGATAGCGCCGGCAATCCAGCGCCGGCCGTGAAGAAAGTGTATCACTGCGGCAATTGA CGAGCCGACAAGATAAAGCC
Downstream 100 bases:
>100_bases TTTCCAATGCGCCTCGCCGCGCGGCCGTGCCGGTAGCGCCTCGCGGCGGCGCGGCTGCATGCCGTGCTCGCTGGCGTGTC CCACGGCCGACGCGGCCGGC
Product: Twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MKSNRRDFIKKSAKVLGAAGAISLLPASIRRALAIPASSKTGTINDVEHVVVLMQENRSFDHYLGHHAGFRGFNDRSTLP VDAQASIFNQPDGQGGYVTTFHLDSNATRAQTISSLPHGWSDGHAAWNDGRWDNWVPAKGGLTMGHFARNDIPFHYALAD AFTVCDAYFASCLGPTNTNRLHLMTGMIDVAGTGGGPLIDNTPAHVFTWTTYPERLQKAGVSWRVYQGSDGSEPFRTSLT PNPAGSTNLDYPNPYNVLNFFQAYTAADADPALVANATTKRTLAELTNDVKAGTLPQVSWLLPPYLCSEHPARSPADGAT YIAAVLDALTSNPDTWSKTALFITYDENDGFFDHVVPPSPPMSSREGLSNVATANEFYAGSSTNPSGPVGLGARVPMFVV SPWSKGAWTCSEVFDHTSIIKFIEKRFGVVEPNISAWRRAICGDLTSAFDFTSPDASAVSVPSVAGLSAAAAAQSTLAPP TVPVTQVPSQQERGSRNARALPYELFVDAAQDLSASTITLSFINTGSVAAGFAVYSAGTPTSVKRYTVDANSKLSDSWRF AGGAAVASAYDLTVIAPNGFVRRFVSSGTSASSQEATVCYEVTAGDLAVNLVNTGKAGVTFRITDNRYGVAAQSVSVAAG QTVQVPWSLAASKRWYDLGITCDADARFLRQFAGHVEIGAPGVTDPSMA
Sequences:
>Translated_689_residues MKSNRRDFIKKSAKVLGAAGAISLLPASIRRALAIPASSKTGTINDVEHVVVLMQENRSFDHYLGHHAGFRGFNDRSTLP VDAQASIFNQPDGQGGYVTTFHLDSNATRAQTISSLPHGWSDGHAAWNDGRWDNWVPAKGGLTMGHFARNDIPFHYALAD AFTVCDAYFASCLGPTNTNRLHLMTGMIDVAGTGGGPLIDNTPAHVFTWTTYPERLQKAGVSWRVYQGSDGSEPFRTSLT PNPAGSTNLDYPNPYNVLNFFQAYTAADADPALVANATTKRTLAELTNDVKAGTLPQVSWLLPPYLCSEHPARSPADGAT YIAAVLDALTSNPDTWSKTALFITYDENDGFFDHVVPPSPPMSSREGLSNVATANEFYAGSSTNPSGPVGLGARVPMFVV SPWSKGAWTCSEVFDHTSIIKFIEKRFGVVEPNISAWRRAICGDLTSAFDFTSPDASAVSVPSVAGLSAAAAAQSTLAPP TVPVTQVPSQQERGSRNARALPYELFVDAAQDLSASTITLSFINTGSVAAGFAVYSAGTPTSVKRYTVDANSKLSDSWRF AGGAAVASAYDLTVIAPNGFVRRFVSSGTSASSQEATVCYEVTAGDLAVNLVNTGKAGVTFRITDNRYGVAAQSVSVAAG QTVQVPWSLAASKRWYDLGITCDADARFLRQFAGHVEIGAPGVTDPSMA >Mature_689_residues MKSNRRDFIKKSAKVLGAAGAISLLPASIRRALAIPASSKTGTINDVEHVVVLMQENRSFDHYLGHHAGFRGFNDRSTLP VDAQASIFNQPDGQGGYVTTFHLDSNATRAQTISSLPHGWSDGHAAWNDGRWDNWVPAKGGLTMGHFARNDIPFHYALAD AFTVCDAYFASCLGPTNTNRLHLMTGMIDVAGTGGGPLIDNTPAHVFTWTTYPERLQKAGVSWRVYQGSDGSEPFRTSLT PNPAGSTNLDYPNPYNVLNFFQAYTAADADPALVANATTKRTLAELTNDVKAGTLPQVSWLLPPYLCSEHPARSPADGAT YIAAVLDALTSNPDTWSKTALFITYDENDGFFDHVVPPSPPMSSREGLSNVATANEFYAGSSTNPSGPVGLGARVPMFVV SPWSKGAWTCSEVFDHTSIIKFIEKRFGVVEPNISAWRRAICGDLTSAFDFTSPDASAVSVPSVAGLSAAAAAQSTLAPP TVPVTQVPSQQERGSRNARALPYELFVDAAQDLSASTITLSFINTGSVAAGFAVYSAGTPTSVKRYTVDANSKLSDSWRF AGGAAVASAYDLTVIAPNGFVRRFVSSGTSASSQEATVCYEVTAGDLAVNLVNTGKAGVTFRITDNRYGVAAQSVSVAAG QTVQVPWSLAASKRWYDLGITCDADARFLRQFAGHVEIGAPGVTDPSMA
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 73198; Mature: 73198
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNRRDFIKKSAKVLGAAGAISLLPASIRRALAIPASSKTGTINDVEHVVVLMQENRSF CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECCCCH DHYLGHHAGFRGFNDRSTLPVDAQASIFNQPDGQGGYVTTFHLDSNATRAQTISSLPHGW HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCC SDGHAAWNDGRWDNWVPAKGGLTMGHFARNDIPFHYALADAFTVCDAYFASCLGPTNTNR CCCCCCCCCCCCCCEECCCCCCEECHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCE LHLMTGMIDVAGTGGGPLIDNTPAHVFTWTTYPERLQKAGVSWRVYQGSDGSEPFRTSLT EEEEEEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEEEECCCCCCCCCCCCC PNPAGSTNLDYPNPYNVLNFFQAYTAADADPALVANATTKRTLAELTNDVKAGTLPQVSW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHH LLPPYLCSEHPARSPADGATYIAAVLDALTSNPDTWSKTALFITYDENDGFFDHVVPPSP HCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCCCCCC PMSSREGLSNVATANEFYAGSSTNPSGPVGLGARVPMFVVSPWSKGAWTCSEVFDHTSII CCCCHHCHHHHHCCHHEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHH KFIEKRFGVVEPNISAWRRAICGDLTSAFDFTSPDASAVSVPSVAGLSAAAAAQSTLAPP HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC TVPVTQVPSQQERGSRNARALPYELFVDAAQDLSASTITLSFINTGSVAAGFAVYSAGTP CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCHHCEEEEECCCC TSVKRYTVDANSKLSDSWRFAGGAAVASAYDLTVIAPNGFVRRFVSSGTSASSQEATVCY CCEEEEEECCCCCCCCCCCCCCCHHHHCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEE EVTAGDLAVNLVNTGKAGVTFRITDNRYGVAAQSVSVAAGQTVQVPWSLAASKRWYDLGI EEECCCEEEEEEECCCCCEEEEEECCCCCEEECCEEEECCCEEECCHHHHCCCEEEEEEE TCDADARFLRQFAGHVEIGAPGVTDPSMA EECHHHHHHHHHHCCEEECCCCCCCCCCC >Mature Secondary Structure MKSNRRDFIKKSAKVLGAAGAISLLPASIRRALAIPASSKTGTINDVEHVVVLMQENRSF CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECCCCH DHYLGHHAGFRGFNDRSTLPVDAQASIFNQPDGQGGYVTTFHLDSNATRAQTISSLPHGW HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCC SDGHAAWNDGRWDNWVPAKGGLTMGHFARNDIPFHYALADAFTVCDAYFASCLGPTNTNR CCCCCCCCCCCCCCEECCCCCCEECHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCE LHLMTGMIDVAGTGGGPLIDNTPAHVFTWTTYPERLQKAGVSWRVYQGSDGSEPFRTSLT EEEEEEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEEEECCCCCCCCCCCCC PNPAGSTNLDYPNPYNVLNFFQAYTAADADPALVANATTKRTLAELTNDVKAGTLPQVSW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHH LLPPYLCSEHPARSPADGATYIAAVLDALTSNPDTWSKTALFITYDENDGFFDHVVPPSP HCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCCCCCC PMSSREGLSNVATANEFYAGSSTNPSGPVGLGARVPMFVVSPWSKGAWTCSEVFDHTSII CCCCHHCHHHHHCCHHEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHH KFIEKRFGVVEPNISAWRRAICGDLTSAFDFTSPDASAVSVPSVAGLSAAAAAQSTLAPP HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC TVPVTQVPSQQERGSRNARALPYELFVDAAQDLSASTITLSFINTGSVAAGFAVYSAGTP CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCHHCEEEEECCCC TSVKRYTVDANSKLSDSWRFAGGAAVASAYDLTVIAPNGFVRRFVSSGTSASSQEATVCY CCEEEEEECCCCCCCCCCCCCCCHHHHCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEE EVTAGDLAVNLVNTGKAGVTFRITDNRYGVAAQSVSVAAGQTVQVPWSLAASKRWYDLGI EEECCCEEEEEEECCCCCEEEEEECCCCCEEECCEEEECCCEEECCHHHHCCCEEEEEEE TCDADARFLRQFAGHVEIGAPGVTDPSMA EECHHHHHHHHHHCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]