| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is leuA [H]
Identifier: 238024423
GI number: 238024423
Start: 1299349
End: 1301061
Strand: Direct
Name: leuA [H]
Synonym: bglu_2g10170
Alternate gene names: 238024423
Gene position: 1299349-1301061 (Clockwise)
Preceding gene: 238024422
Following gene: 238024426
Centisome position: 45.96
GC content: 69.06
Gene sequence:
>1713_bases ATGATGCTCAAGAACCCCGCCGCCAAGTACCGCCCGTTCACGCCCGTCAACCTGACCGATCGCCAGTGGCCGTCGCGCAC CATCACGCGCGCGCCGATCTGGATGAGCACCGACCTGCGCGACGGCAACCAGGCGCTGTTCGAGCCGATGGACGCGGCGC GCAAGATGCGCATGTTCAAGATGCTGGTGGCGATCGGTTTCAAGGAAATCGAGGTGGCGTTTCCGTCGGCCTCCGAGACC GACTTCAATTTCGTGCGCGAGCTGATCGAGGGCGGCCACATTCCCGACGACGTGACGATCGAAGTGCTGACGCAGGCGCG CGACGACCTGATCGAGCGCACCTTCGCGTCGCTGCGCGGCGCCAAGCGCGCGATCGTCCACCTCTACAACGCGACCGCGC CCGAATTCCGCCGCATCGTGTTCGGCCTCGAGCGCGAGGGCGTGAAGCAGCTGGCGGTCAGCGCGGCGCGCACCATCAAG CGGCTGGCCGACGCGGCCGCCGACACGCAGTTCACGCTGCAATACAGCCCGGAAACCTTCACCGCCACCGAGCTCGACTT CGCCAAGGAAGTCTGCGATGCCGTGTTCGACGTCTGGCAGCCGACGCCCGAGCGCAAGTCGATCGTGAACCTGCCGGCCA CCGTCGAGGTGGGTACGCCGAACTACTACGCCGACCAGATCGAGTGGATGCACCGCAATCTCGCGCGGCGCGATTCGCTG ATCCTCTCGGTGCATCCGCACAACGACCGCGGCACCGCGGTGGCGGCGGCCGAGCTGGCGGTGATGGCCGGCGCCGATCG CATCGAGGGCTGCCTGTTCGGCAACGGCGAGCGCACCGGCAACGTCGATCTGGTCACGCTCGCGCTGAACCTCTACACGC AGGGCGTCGATCCGGGCCTCGATTTCTCGCAGATCAACAGCGTCGCGCGCACCGCCGAGGAATGCACGCAGCTGCCCGTG CATCCGCGTCATCCCTACGTCGGCGATCTGGTGTTCACGGCGTTCTCCGGCTCGCACCAGGACGCGATCAAGAAGGGCCT CGCGGCGCAGCGCGCCGACGCGCGCTGGGAGGTGCCGTACCTGCCGATCGACCCGAGCGATCTGGGCCGCACCTACGATT CGATCATTCGCGTCAACAGCCAGTCGGGCAAGGGCGGCATCGCCTATCTGCTCGAACAGGGCTATGGCGTGGCGCTGCCG CGCCGCCTGCAGGTGGATTTCAGCGCGGCCGTGCAGCGCCTGACCGACCAGAGCGGGCAGGAGGTCTCGGCCGCGCAGAT CTGGGCGCTGTTCGAATCCGAGTACGTCGCCAACCATGCGCCGCTGCGCTACCTCGGCCACGAGCTGAGCGAGCGCGGCG GCCGCGAGACGATCGTGCTGAGCGCCGAGATCCACGGCGAGCGGCGCGAATTGCGCGGCGAGGGCAACGGCCCGCTCGAC GCGCTGATGAACGCGCTGCGCACGCCGCTGCGCATCCAGCACTACGAGGAGCGGGCGCTGTCGCAGGGCGCCGACGCGAA GGCGGTGGCGATCGCCGAGCTGGCAGGCGAGGGCGTGCCGGGCAGCGCGTTCGGTGTCGGCATCGACGCGAACCTGACCA CCGCGTCGATCCGCGCCGTGATCAGCGGCATCAACCGCGCCTACGCGCGTGCCGGCCAGGCCGCGCAGGCCGGCTTCTTC GCCGTGCAGCCGGCCGCGAGCGAGGTGGCCTGA
Upstream 100 bases:
>100_bases TTTGCCGTTGTGCCGTCTCACCGCTGCGCGCGTGATCGCGATGCCGATCCGGATTGCCGATCCGCGCTGCCGCTTATGAA AACCTGACCGAGAACCGATC
Downstream 100 bases:
>100_bases GCGCGCCGCCGGCGTGCCCGATGCGGCGCGCGATGACGGCCGCCGCCTCGCCGGCCGCCGTCGAACGGCAGGTCACGGCG AGGCTAATTTCGCGCGGTAT
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase; Alpha-isopropylmalate synthase [H]
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MMLKNPAAKYRPFTPVNLTDRQWPSRTITRAPIWMSTDLRDGNQALFEPMDAARKMRMFKMLVAIGFKEIEVAFPSASET DFNFVRELIEGGHIPDDVTIEVLTQARDDLIERTFASLRGAKRAIVHLYNATAPEFRRIVFGLEREGVKQLAVSAARTIK RLADAAADTQFTLQYSPETFTATELDFAKEVCDAVFDVWQPTPERKSIVNLPATVEVGTPNYYADQIEWMHRNLARRDSL ILSVHPHNDRGTAVAAAELAVMAGADRIEGCLFGNGERTGNVDLVTLALNLYTQGVDPGLDFSQINSVARTAEECTQLPV HPRHPYVGDLVFTAFSGSHQDAIKKGLAAQRADARWEVPYLPIDPSDLGRTYDSIIRVNSQSGKGGIAYLLEQGYGVALP RRLQVDFSAAVQRLTDQSGQEVSAAQIWALFESEYVANHAPLRYLGHELSERGGRETIVLSAEIHGERRELRGEGNGPLD ALMNALRTPLRIQHYEERALSQGADAKAVAIAELAGEGVPGSAFGVGIDANLTTASIRAVISGINRAYARAGQAAQAGFF AVQPAASEVA
Sequences:
>Translated_570_residues MMLKNPAAKYRPFTPVNLTDRQWPSRTITRAPIWMSTDLRDGNQALFEPMDAARKMRMFKMLVAIGFKEIEVAFPSASET DFNFVRELIEGGHIPDDVTIEVLTQARDDLIERTFASLRGAKRAIVHLYNATAPEFRRIVFGLEREGVKQLAVSAARTIK RLADAAADTQFTLQYSPETFTATELDFAKEVCDAVFDVWQPTPERKSIVNLPATVEVGTPNYYADQIEWMHRNLARRDSL ILSVHPHNDRGTAVAAAELAVMAGADRIEGCLFGNGERTGNVDLVTLALNLYTQGVDPGLDFSQINSVARTAEECTQLPV HPRHPYVGDLVFTAFSGSHQDAIKKGLAAQRADARWEVPYLPIDPSDLGRTYDSIIRVNSQSGKGGIAYLLEQGYGVALP RRLQVDFSAAVQRLTDQSGQEVSAAQIWALFESEYVANHAPLRYLGHELSERGGRETIVLSAEIHGERRELRGEGNGPLD ALMNALRTPLRIQHYEERALSQGADAKAVAIAELAGEGVPGSAFGVGIDANLTTASIRAVISGINRAYARAGQAAQAGFF AVQPAASEVA >Mature_570_residues MMLKNPAAKYRPFTPVNLTDRQWPSRTITRAPIWMSTDLRDGNQALFEPMDAARKMRMFKMLVAIGFKEIEVAFPSASET DFNFVRELIEGGHIPDDVTIEVLTQARDDLIERTFASLRGAKRAIVHLYNATAPEFRRIVFGLEREGVKQLAVSAARTIK RLADAAADTQFTLQYSPETFTATELDFAKEVCDAVFDVWQPTPERKSIVNLPATVEVGTPNYYADQIEWMHRNLARRDSL ILSVHPHNDRGTAVAAAELAVMAGADRIEGCLFGNGERTGNVDLVTLALNLYTQGVDPGLDFSQINSVARTAEECTQLPV HPRHPYVGDLVFTAFSGSHQDAIKKGLAAQRADARWEVPYLPIDPSDLGRTYDSIIRVNSQSGKGGIAYLLEQGYGVALP RRLQVDFSAAVQRLTDQSGQEVSAAQIWALFESEYVANHAPLRYLGHELSERGGRETIVLSAEIHGERRELRGEGNGPLD ALMNALRTPLRIQHYEERALSQGADAKAVAIAELAGEGVPGSAFGVGIDANLTTASIRAVISGINRAYARAGQAAQAGFF AVQPAASEVA
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786261, Length=534, Percent_Identity=24.1573033707865, Blast_Score=109, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6324682, Length=565, Percent_Identity=46.9026548672566, Blast_Score=537, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6324225, Length=565, Percent_Identity=46.3716814159292, Blast_Score=529, Evalue=1e-151,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR005668 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer [H]
EC number: =2.3.3.13 [H]
Molecular weight: Translated: 62402; Mature: 62402
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1 ; PS00816 AIPM_HOMOCIT_SYNTH_2 ; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLKNPAAKYRPFTPVNLTDRQWPSRTITRAPIWMSTDLRDGNQALFEPMDAARKMRMFK CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHHHHHH MLVAIGFKEIEVAFPSASETDFNFVRELIEGGHIPDDVTIEVLTQARDDLIERTFASLRG HHHHHCCHHEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKRAIVHLYNATAPEFRRIVFGLEREGVKQLAVSAARTIKRLADAAADTQFTLQYSPETF HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC TATELDFAKEVCDAVFDVWQPTPERKSIVNLPATVEVGTPNYYADQIEWMHRNLARRDSL CHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCE ILSVHPHNDRGTAVAAAELAVMAGADRIEGCLFGNGERTGNVDLVTLALNLYTQGVDPGL EEEEECCCCCCCHHHHHHHHHHCCCHHHCEEEECCCCCCCCEEEEEEEEEHHHCCCCCCC DFSQINSVARTAEECTQLPVHPRHPYVGDLVFTAFSGSHQDAIKKGLAAQRADARWEVPY CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCC LPIDPSDLGRTYDSIIRVNSQSGKGGIAYLLEQGYGVALPRRLQVDFSAAVQRLTDQSGQ CCCCHHHHHHHHHHHEEECCCCCCCCHHHEECCCCCCCCCCEEEECHHHHHHHHHCCCCC EVSAAQIWALFESEYVANHAPLRYLGHELSERGGRETIVLSAEIHGERRELRGEGNGPLD CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHCCCCCCCHH ALMNALRTPLRIQHYEERALSQGADAKAVAIAELAGEGVPGSAFGVGIDANLTTASIRAV HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH ISGINRAYARAGQAAQAGFFAVQPAASEVA HHHHHHHHHHCCCHHHCCEEEECCCHHCCC >Mature Secondary Structure MMLKNPAAKYRPFTPVNLTDRQWPSRTITRAPIWMSTDLRDGNQALFEPMDAARKMRMFK CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHHHHHH MLVAIGFKEIEVAFPSASETDFNFVRELIEGGHIPDDVTIEVLTQARDDLIERTFASLRG HHHHHCCHHEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKRAIVHLYNATAPEFRRIVFGLEREGVKQLAVSAARTIKRLADAAADTQFTLQYSPETF HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC TATELDFAKEVCDAVFDVWQPTPERKSIVNLPATVEVGTPNYYADQIEWMHRNLARRDSL CHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCE ILSVHPHNDRGTAVAAAELAVMAGADRIEGCLFGNGERTGNVDLVTLALNLYTQGVDPGL EEEEECCCCCCCHHHHHHHHHHCCCHHHCEEEECCCCCCCCEEEEEEEEEHHHCCCCCCC DFSQINSVARTAEECTQLPVHPRHPYVGDLVFTAFSGSHQDAIKKGLAAQRADARWEVPY CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCC LPIDPSDLGRTYDSIIRVNSQSGKGGIAYLLEQGYGVALPRRLQVDFSAAVQRLTDQSGQ CCCCHHHHHHHHHHHEEECCCCCCCCHHHEECCCCCCCCCCEEEECHHHHHHHHHCCCCC EVSAAQIWALFESEYVANHAPLRYLGHELSERGGRETIVLSAEIHGERRELRGEGNGPLD CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHCCCCCCCHH ALMNALRTPLRIQHYEERALSQGADAKAVAIAELAGEGVPGSAFGVGIDANLTTASIRAV HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH ISGINRAYARAGQAAQAGFFAVQPAASEVA HHHHHHHHHHCCCHHHCCEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA