Click here to switch to the map view.

The map label for this gene is puuR [H]

Identifier: 238024352

GI number: 238024352

Start: 1164367

End: 1164981

Strand: Direct

Name: puuR [H]

Synonym: bglu_2g09450

Alternate gene names: 238024352

Gene position: 1164367-1164981 (Clockwise)

Preceding gene: 238024347

Following gene: 238024353

Centisome position: 41.18

GC content: 66.18

Gene sequence:

>615_bases
ATGAAGCCAGCACAGGTTAAGAAGAAGGACGTAACGGAACTCCGTCATTCCGACGTCGGAGGCCGCCTGCGGGCCCTGCG
CGTCGAGCAAGGCTTGTCGGTCAACGAACTTGCCATGCGCGCCGGGGTGTCGGTCGGGACGGTGAGTCAGGTCGAGCGCA
ACAAGGCGAACCCGTCGGTGCGCATTCTCGAGCGCCTGAGGCAGGCGTTGTCGGTGCCGCTTTCCGCGCTGCTGGAAGAC
GAGGGCGCCGCCTCGGACCCGGTGGTGGGCGACTTCGTGCGCAAGGCCGACGAGCGGCCGCTGTTCGATGTCGGCAAGCA
AGGCATGCAGAAAGAGCTGCTATCGCCGCCCGGAGATCACGACCTCAAGATGATGATCATCCTGCTGCCCGCAGGCGCCG
GCTCCGATGAAGTGCTGGTGGGCGTGGGGGAGAAAGCCGGGCTCGTGCTCGATGGCGCCATCGTCCTGAATGTCGGCGAT
CGCCGCGCCGTGCTGCGCGCAGGCGATAGCTTCCAGTTCAAGAGCACCGTGCCGCACAGCGTGCGCAACGAGGGCGCCGA
GACGGCGCGCGTGCTGTGGGTCATGAACACGCAGCCACCGGTCCTGCATCTGTGA

Upstream 100 bases:

>100_bases
CGGGCAGGCCGGCTCGGGTCGAAGGCGGGCACGAGCGGATGAGCGAATGAAGCGCGACTGCGCGGGGCCGAGGGTATTGA
ACAGTTCAACAGGGGTTTGC

Downstream 100 bases:

>100_bases
GTCGCCCGCCCGGCGCGCCGCGCGCCAGGGCGGGGCGCCATGACCTGTTGCATCGCCGGTTCGTGCGATGCGGCGCGGGC
CCGGCCGTCTCGGCGAACGG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKPAQVKKKDVTELRHSDVGGRLRALRVEQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALSVPLSALLED
EGAASDPVVGDFVRKADERPLFDVGKQGMQKELLSPPGDHDLKMMIILLPAGAGSDEVLVGVGEKAGLVLDGAIVLNVGD
RRAVLRAGDSFQFKSTVPHSVRNEGAETARVLWVMNTQPPVLHL

Sequences:

>Translated_204_residues
MKPAQVKKKDVTELRHSDVGGRLRALRVEQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALSVPLSALLED
EGAASDPVVGDFVRKADERPLFDVGKQGMQKELLSPPGDHDLKMMIILLPAGAGSDEVLVGVGEKAGLVLDGAIVLNVGD
RRAVLRAGDSFQFKSTVPHSVRNEGAETARVLWVMNTQPPVLHL
>Mature_204_residues
MKPAQVKKKDVTELRHSDVGGRLRALRVEQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALSVPLSALLED
EGAASDPVVGDFVRKADERPLFDVGKQGMQKELLSPPGDHDLKMMIILLPAGAGSDEVLVGVGEKAGLVLDGAIVLNVGD
RRAVLRAGDSFQFKSTVPHSVRNEGAETARVLWVMNTQPPVLHL

Specific function: Represses puuD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=174, Percent_Identity=28.1609195402299, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 21950; Mature: 21950

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAQVKKKDVTELRHSDVGGRLRALRVEQGLSVNELAMRAGVSVGTVSQVERNKANPSV
CCCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHH
RILERLRQALSVPLSALLEDEGAASDPVVGDFVRKADERPLFDVGKQGMQKELLSPPGDH
HHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
DLKMMIILLPAGAGSDEVLVGVGEKAGLVLDGAIVLNVGDRRAVLRAGDSFQFKSTVPHS
CEEEEEEEEECCCCCCCEEEECCCCCCEEECCEEEEEECCCEEEEECCCCCEECCCCCHH
VRNEGAETARVLWVMNTQPPVLHL
HHHCCCCEEEEEEEECCCCCEEEC
>Mature Secondary Structure
MKPAQVKKKDVTELRHSDVGGRLRALRVEQGLSVNELAMRAGVSVGTVSQVERNKANPSV
CCCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHH
RILERLRQALSVPLSALLEDEGAASDPVVGDFVRKADERPLFDVGKQGMQKELLSPPGDH
HHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
DLKMMIILLPAGAGSDEVLVGVGEKAGLVLDGAIVLNVGDRRAVLRAGDSFQFKSTVPHS
CEEEEEEEEECCCCCCCEEEECCCCCCEEECCEEEEEECCCEEEEECCCCCEECCCCCHH
VRNEGAETARVLWVMNTQPPVLHL
HHHCCCCEEEEEEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]