| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024347
Identifier: 238024347
GI number: 238024347
Start: 1156719
End: 1157615
Strand: Direct
Name: 238024347
Synonym: bglu_2g09380
Alternate gene names: NA
Gene position: 1156719-1157615 (Clockwise)
Preceding gene: 238024346
Following gene: 238024352
Centisome position: 40.91
GC content: 69.23
Gene sequence:
>897_bases ATGAAAAAGACCATACGCGCCTTCCAGTTTGTTTACACCGTGCTCGCCATAGTGGCGCTTTCGGCATGCGGCGGCGGTGA CGATGCCGCTACGCCGGCCGCGTCCGCCCCTGCGGCTTCCACTCCCGCCGCGCCCGTGCCGGCGGCGTCCACGCCGTCGG CCTCGACACCGCCCGCCGCCCAGGTGGCATGCCGGCCCAGCGGCAGCTTCACTTACTCGGGGTCCGCCTCGCAGGTCGCG GCGAGCAACGGCCAACTCGCGGTGGTGGTCGTGCCGACCCTGCCGAAAGCCAATTCGAAGGGCCGCAACATGACGGCGCC GAACGCGCCCGCCTCGAGCCAGATCCAGCAGGCGAGCGGCGCGTTCACGACGCTCGCCTCGTCGGCCGCCGCGTCGGATT GCCTTGGGATCGACGACGGCGGGGTGGTGTCCGAGATCCAGAGCGTCGGCACCGACGTGGCGATCGGCCGGTGGAATCAG GCGATGGACACGGACGGCAATACCTACACCATGGAGCAGGGCGTCCACTACGCCGTCGGGACGCCGCTGGCCTTGGCCGC GAAAAGCGGCACGCTCGCCTGCACGCAGCTGATCGCCGACAAGGTGGCGAACGCCGTGGGCGGCCCGAGCGGCACGCTCA ATACGAGTTCGGCCACGCTCGATCTCGCGGCGGGCACGCTCGACAACCTGAATCTGTCGATGAGCCTCAATGGCACGCCC TACACGTTCAGCAGCACGCAGACGCCGCTGAACGGCGCCGCGACGAGCGGGCAGTTGTCGGTCCAGTCGGTGGTGGTCGG TCATGACGCCGCGCAGCCGCTGATCGCCGTCGGCTATTCCGCCACGCTGCCGGACACGACGGGAATCGGGGGCGTCGTGG TGTTGTCGTGCAAGTGA
Upstream 100 bases:
>100_bases CTATCAACGCGCCTCTAGCGAGAGGCCAGCGCTAGGGTTGTCAACATCACTTCTAAAAACCATGTCTCGGGGACACCGAG AAAACACGCAGAGCGATTCA
Downstream 100 bases:
>100_bases GCCGGCGCCGCTGAGATGGACGGCCGATGCGTGGCGCACCGCTGCGAGCAAGGCGCAATCGGCCGACATCGAGCTCAATC GCTTTCACGGGCGCGCGCGT
Product: putative lipoprotein transmembrane
Products: NA
Alternate protein names: Transmembrane Lipoprotein; Lipoprotein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKKTIRAFQFVYTVLAIVALSACGGGDDAATPAASAPAASTPAAPVPAASTPSASTPPAAQVACRPSGSFTYSGSASQVA ASNGQLAVVVVPTLPKANSKGRNMTAPNAPASSQIQQASGAFTTLASSAAASDCLGIDDGGVVSEIQSVGTDVAIGRWNQ AMDTDGNTYTMEQGVHYAVGTPLALAAKSGTLACTQLIADKVANAVGGPSGTLNTSSATLDLAAGTLDNLNLSMSLNGTP YTFSSTQTPLNGAATSGQLSVQSVVVGHDAAQPLIAVGYSATLPDTTGIGGVVVLSCK
Sequences:
>Translated_298_residues MKKTIRAFQFVYTVLAIVALSACGGGDDAATPAASAPAASTPAAPVPAASTPSASTPPAAQVACRPSGSFTYSGSASQVA ASNGQLAVVVVPTLPKANSKGRNMTAPNAPASSQIQQASGAFTTLASSAAASDCLGIDDGGVVSEIQSVGTDVAIGRWNQ AMDTDGNTYTMEQGVHYAVGTPLALAAKSGTLACTQLIADKVANAVGGPSGTLNTSSATLDLAAGTLDNLNLSMSLNGTP YTFSSTQTPLNGAATSGQLSVQSVVVGHDAAQPLIAVGYSATLPDTTGIGGVVVLSCK >Mature_298_residues MKKTIRAFQFVYTVLAIVALSACGGGDDAATPAASAPAASTPAAPVPAASTPSASTPPAAQVACRPSGSFTYSGSASQVA ASNGQLAVVVVPTLPKANSKGRNMTAPNAPASSQIQQASGAFTTLASSAAASDCLGIDDGGVVSEIQSVGTDVAIGRWNQ AMDTDGNTYTMEQGVHYAVGTPLALAAKSGTLACTQLIADKVANAVGGPSGTLNTSSATLDLAAGTLDNLNLSMSLNGTP YTFSSTQTPLNGAATSGQLSVQSVVVGHDAAQPLIAVGYSATLPDTTGIGGVVVLSCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29208; Mature: 29208
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIRAFQFVYTVLAIVALSACGGGDDAATPAASAPAASTPAAPVPAASTPSASTPPAA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVACRPSGSFTYSGSASQVAASNGQLAVVVVPTLPKANSKGRNMTAPNAPASSQIQQASG EEEECCCCCEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCC AFTTLASSAAASDCLGIDDGGVVSEIQSVGTDVAIGRWNQAMDTDGNTYTMEQGVHYAVG HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHCCCCCCEEECCCCCEEECC TPLALAAKSGTLACTQLIADKVANAVGGPSGTLNTSSATLDLAAGTLDNLNLSMSLNGTP CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC YTFSSTQTPLNGAATSGQLSVQSVVVGHDAAQPLIAVGYSATLPDTTGIGGVVVLSCK EEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MKKTIRAFQFVYTVLAIVALSACGGGDDAATPAASAPAASTPAAPVPAASTPSASTPPAA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVACRPSGSFTYSGSASQVAASNGQLAVVVVPTLPKANSKGRNMTAPNAPASSQIQQASG EEEECCCCCEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCC AFTTLASSAAASDCLGIDDGGVVSEIQSVGTDVAIGRWNQAMDTDGNTYTMEQGVHYAVG HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHCCCCCCEEECCCCCEEECC TPLALAAKSGTLACTQLIADKVANAVGGPSGTLNTSSATLDLAAGTLDNLNLSMSLNGTP CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC YTFSSTQTPLNGAATSGQLSVQSVVVGHDAAQPLIAVGYSATLPDTTGIGGVVVLSCK EEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA