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The map label for this gene is ydeS [C]

Identifier: 238024294

GI number: 238024294

Start: 1064176

End: 1065324

Strand: Reverse

Name: ydeS [C]

Synonym: bglu_2g08790

Alternate gene names: 238024294

Gene position: 1065324-1064176 (Counterclockwise)

Preceding gene: 238024295

Following gene: 238024293

Centisome position: 37.68

GC content: 56.83

Gene sequence:

>1149_bases
ATGTTGGATGTAATACGACGCTTCGGCCATATTCATCGCCTGGCCGCATCGGCTGCGTTGCGGCTCGCAGTACGCTGCAG
TCTGCTGATACACGCACTGTGTCCTCACACAGTCTGGGCTGATGCCGGTTGCATGAGCCTCGAACAGACCTATACGGTGC
CGATGCCCGCATCGATCACCGTGCAGCCCGGCGCACCCGTCGGCACGCTTTTGACGGAGTGGGTGTCCACTACTGCAACC
ACCGGTTACTTCATCTGCAGCAATAGTACCCACCAGGGGGCTACCGGAACCGCCTTCGCGCCTGTAGCCCTGACTAAGGC
TGGAATAAATGTGTCCAGTCCGCATGATATCTACACAGTGTGGAATACCAATGTGCCCGGCGTCGGTGTTGCGATTGGTG
TGCGTCCCTACGTAAACGGCTGCGGCTGGCAGTCGTTCCACGACCTCGGCACGCCTAACATTTTTCCCGCCCCATGGGTC
GGCAACGCATGCAACAGCTCCAGCAATTGGTTGAGAAACGGTGGCCAAATCGAGGTCGCGCTAGTCAAGACTGGGCCGAT
CAAGGGGGGCACCATAAGCGGAGACGTAAGGGTCGAAGCAGCGGCAGCTATCAGGCAGGACGAGTCCACGAACTATACGT
TTCCGCAGTTCGGTCGCAAGTCGTTCGTGCTGGCAAGTACCAACATAAACTTGGCGACCTGCACGACAATGGAGTCCTTG
GAGGTTGAGATGGGCTCGGCCAAGCAATCGAGCTTCACGGGCATCGGCTCAACCACACCGGCGCAGACCTTCGAGTTGCG
CTTCTCTAATTGCCCGACCGGCCTGAACTCGGTTCAATACGAGTTCATCCCGATGAATGCAGTGGCCGATGCAGCCAACG
GCGTGATAGGGTTGGCCCCCTACTCATCCGCCTCCGGTATCGGTGTGCAGATAAAGGACAGTAGCGGCAAAGCGATTAAA
TTCAACACACTGTATACGCTAAAGAACTACAACAGCTCGACCGGGGGCTCTTACGCCGTTCCTCTCACGGCCAACTATTA
CCAAACTTCGGCCCGAGTGACGCCCGGCACTGCAGAAGCGTTATTGATTTTTAGAGGCCAGTTCAAAAACTCCCGAGAGG
GGCTGTTTACTTCCTCGGCAAGCTGTTAA

Upstream 100 bases:

>100_bases
AGCGCGCAAAATAGCCGACAGAACGGATGCAGTGCCGCACATCGCCGATTTCGTGTAGTACTACATACCTAATTTTGAAG
AATACGGAGGTAACACGGAC

Downstream 100 bases:

>100_bases
CCTTGGGCATCAGAACAACGGAAGTCCAAGGATGGAAGCGCCAATCATTGACGACGAACTGTGGATACTGATCGAACCAT
TGCTGCCACCTGCGAAGCTT

Product: type-1 fimbrial protein subunit A

Products: NA

Alternate protein names: Fimbrial Adhesin; Fimbrin-Like Protein Fimi; Fimbrial Family; Type-1 Fimbrial Protein A Subunit; Fimbrial Componenet; Type-1 Fimbrial Protein Subunit A; Fimbrial-Like Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLDVIRRFGHIHRLAASAALRLAVRCSLLIHALCPHTVWADAGCMSLEQTYTVPMPASITVQPGAPVGTLLTEWVSTTAT
TGYFICSNSTHQGATGTAFAPVALTKAGINVSSPHDIYTVWNTNVPGVGVAIGVRPYVNGCGWQSFHDLGTPNIFPAPWV
GNACNSSSNWLRNGGQIEVALVKTGPIKGGTISGDVRVEAAAAIRQDESTNYTFPQFGRKSFVLASTNINLATCTTMESL
EVEMGSAKQSSFTGIGSTTPAQTFELRFSNCPTGLNSVQYEFIPMNAVADAANGVIGLAPYSSASGIGVQIKDSSGKAIK
FNTLYTLKNYNSSTGGSYAVPLTANYYQTSARVTPGTAEALLIFRGQFKNSREGLFTSSASC

Sequences:

>Translated_382_residues
MLDVIRRFGHIHRLAASAALRLAVRCSLLIHALCPHTVWADAGCMSLEQTYTVPMPASITVQPGAPVGTLLTEWVSTTAT
TGYFICSNSTHQGATGTAFAPVALTKAGINVSSPHDIYTVWNTNVPGVGVAIGVRPYVNGCGWQSFHDLGTPNIFPAPWV
GNACNSSSNWLRNGGQIEVALVKTGPIKGGTISGDVRVEAAAAIRQDESTNYTFPQFGRKSFVLASTNINLATCTTMESL
EVEMGSAKQSSFTGIGSTTPAQTFELRFSNCPTGLNSVQYEFIPMNAVADAANGVIGLAPYSSASGIGVQIKDSSGKAIK
FNTLYTLKNYNSSTGGSYAVPLTANYYQTSARVTPGTAEALLIFRGQFKNSREGLFTSSASC
>Mature_382_residues
MLDVIRRFGHIHRLAASAALRLAVRCSLLIHALCPHTVWADAGCMSLEQTYTVPMPASITVQPGAPVGTLLTEWVSTTAT
TGYFICSNSTHQGATGTAFAPVALTKAGINVSSPHDIYTVWNTNVPGVGVAIGVRPYVNGCGWQSFHDLGTPNIFPAPWV
GNACNSSSNWLRNGGQIEVALVKTGPIKGGTISGDVRVEAAAAIRQDESTNYTFPQFGRKSFVLASTNINLATCTTMESL
EVEMGSAKQSSFTGIGSTTPAQTFELRFSNCPTGLNSVQYEFIPMNAVADAANGVIGLAPYSSASGIGVQIKDSSGKAIK
FNTLYTLKNYNSSTGGSYAVPLTANYYQTSARVTPGTAEALLIFRGQFKNSREGLFTSSASC

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40307; Mature: 40307

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVIRRFGHIHRLAASAALRLAVRCSLLIHALCPHTVWADAGCMSLEQTYTVPMPASIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCCCCEEE
VQPGAPVGTLLTEWVSTTATTGYFICSNSTHQGATGTAFAPVALTKAGINVSSPHDIYTV
ECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCEEEEECCCCCCCCCEEEEE
WNTNVPGVGVAIGVRPYVNGCGWQSFHDLGTPNIFPAPWVGNACNSSSNWLRNGGQIEVA
ECCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEE
LVKTGPIKGGTISGDVRVEAAAAIRQDESTNYTFPQFGRKSFVLASTNINLATCTTMESL
EEEECCCCCCEECCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHE
EVEMGSAKQSSFTGIGSTTPAQTFELRFSNCPTGLNSVQYEFIPMNAVADAANGVIGLAP
EEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECHHHHHHCCCEEEECC
YSSASGIGVQIKDSSGKAIKFNTLYTLKNYNSSTGGSYAVPLTANYYQTSARVTPGTAEA
CCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECEEECCCEECCCCCEE
LLIFRGQFKNSREGLFTSSASC
EEEEECCCCCCCCCEEECCCCC
>Mature Secondary Structure
MLDVIRRFGHIHRLAASAALRLAVRCSLLIHALCPHTVWADAGCMSLEQTYTVPMPASIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCCCCEEE
VQPGAPVGTLLTEWVSTTATTGYFICSNSTHQGATGTAFAPVALTKAGINVSSPHDIYTV
ECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCEEEEECCCCCCCCCEEEEE
WNTNVPGVGVAIGVRPYVNGCGWQSFHDLGTPNIFPAPWVGNACNSSSNWLRNGGQIEVA
ECCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEE
LVKTGPIKGGTISGDVRVEAAAAIRQDESTNYTFPQFGRKSFVLASTNINLATCTTMESL
EEEECCCCCCEECCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHE
EVEMGSAKQSSFTGIGSTTPAQTFELRFSNCPTGLNSVQYEFIPMNAVADAANGVIGLAP
EEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECHHHHHHCCCEEEECC
YSSASGIGVQIKDSSGKAIKFNTLYTLKNYNSSTGGSYAVPLTANYYQTSARVTPGTAEA
CCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECEEECCCEECCCCCEE
LLIFRGQFKNSREGLFTSSASC
EEEEECCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA