| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is intE [C]
Identifier: 238024287
GI number: 238024287
Start: 1057400
End: 1057852
Strand: Reverse
Name: intE [C]
Synonym: bglu_2g08700
Alternate gene names: 238024287
Gene position: 1057852-1057400 (Counterclockwise)
Preceding gene: 238024289
Following gene: 238024278
Centisome position: 37.42
GC content: 59.16
Gene sequence:
>453_bases ATGGACCTCGCCTATCTGACCGGCCAGCGTCCCCAGGACACGCTATCGCACGATGAACGAGATATCCGCGACAACTTTCT CCATATCGACCAAGGCAAAACCGGGAAGAAACTGCGAATGGAGATCTCTGGCGAGTTGAAGGCGCTCATCGATCGAATTC GCGCCAGGAAAGCCGGCTACAAGGTGGTGAGCACGGTGTTGATCGTGAACGAGCGCGGGGAGCGCATGACGCTAGATACA CTTCAGCGCCGTTTTCGGGAAGCTCGCCGCCGTGCAGGAATCGGCGACTCGGAGTTCCAATTTCGCGATTTGCGGGCCAA GGCCGGCACCGACAAGACCGACAGCACTGGCGACATCCGGCAGGCTCAAAAGCAGCTCGGACACACCACAATCGGCATGA CCGAACACTACGTTCGCAACCGCCGGGGCGACAAGGTCAAGCCTACGCGATGA
Upstream 100 bases:
>100_bases GCTGTTTTGATGAAGATTCGCACCTCTATCAAAACGGGTAACCCCGCCTCTTGGTAAGGCATTACTGTCAGATCAAGTCT GAACTTCTACACGTGATGCA
Downstream 100 bases:
>100_bases CCGATTTTGCGGAACAGCACCGTTTTTGCGGAACTGGAACAGGAGGATTTCAGGCTCGGCAGAATCGCGCCAAGCCAAGT GGCGGAAGGCAGCTGGAGTC
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Integrase/Recombinase; Integrase; Site-Specific Recombinase; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGYKVVSTVLIVNERGERMTLDT LQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIRQAQKQLGHTTIGMTEHYVRNRRGDKVKPTR
Sequences:
>Translated_150_residues MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGYKVVSTVLIVNERGERMTLDT LQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIRQAQKQLGHTTIGMTEHYVRNRRGDKVKPTR >Mature_150_residues MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGYKVVSTVLIVNERGERMTLDT LQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIRQAQKQLGHTTIGMTEHYVRNRRGDKVKPTR
Specific function: Integrase From The Cryptic Lambdoic Prophage E14. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17324; Mature: 17324
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGY CCCCCCCCCCCCHHHHCCHHHHHHCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHCCH KVVSTVLIVNERGERMTLDTLQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIR HHHHHHHEECCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHH QAQKQLGHTTIGMTEHYVRNRRGDKVKPTR HHHHHHCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGY CCCCCCCCCCCCHHHHCCHHHHHHCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHCCH KVVSTVLIVNERGERMTLDTLQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIR HHHHHHHEECCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHH QAQKQLGHTTIGMTEHYVRNRRGDKVKPTR HHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA