Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is intE [C]

Identifier: 238024287

GI number: 238024287

Start: 1057400

End: 1057852

Strand: Reverse

Name: intE [C]

Synonym: bglu_2g08700

Alternate gene names: 238024287

Gene position: 1057852-1057400 (Counterclockwise)

Preceding gene: 238024289

Following gene: 238024278

Centisome position: 37.42

GC content: 59.16

Gene sequence:

>453_bases
ATGGACCTCGCCTATCTGACCGGCCAGCGTCCCCAGGACACGCTATCGCACGATGAACGAGATATCCGCGACAACTTTCT
CCATATCGACCAAGGCAAAACCGGGAAGAAACTGCGAATGGAGATCTCTGGCGAGTTGAAGGCGCTCATCGATCGAATTC
GCGCCAGGAAAGCCGGCTACAAGGTGGTGAGCACGGTGTTGATCGTGAACGAGCGCGGGGAGCGCATGACGCTAGATACA
CTTCAGCGCCGTTTTCGGGAAGCTCGCCGCCGTGCAGGAATCGGCGACTCGGAGTTCCAATTTCGCGATTTGCGGGCCAA
GGCCGGCACCGACAAGACCGACAGCACTGGCGACATCCGGCAGGCTCAAAAGCAGCTCGGACACACCACAATCGGCATGA
CCGAACACTACGTTCGCAACCGCCGGGGCGACAAGGTCAAGCCTACGCGATGA

Upstream 100 bases:

>100_bases
GCTGTTTTGATGAAGATTCGCACCTCTATCAAAACGGGTAACCCCGCCTCTTGGTAAGGCATTACTGTCAGATCAAGTCT
GAACTTCTACACGTGATGCA

Downstream 100 bases:

>100_bases
CCGATTTTGCGGAACAGCACCGTTTTTGCGGAACTGGAACAGGAGGATTTCAGGCTCGGCAGAATCGCGCCAAGCCAAGT
GGCGGAAGGCAGCTGGAGTC

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Integrase/Recombinase; Integrase; Site-Specific Recombinase; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGYKVVSTVLIVNERGERMTLDT
LQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIRQAQKQLGHTTIGMTEHYVRNRRGDKVKPTR

Sequences:

>Translated_150_residues
MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGYKVVSTVLIVNERGERMTLDT
LQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIRQAQKQLGHTTIGMTEHYVRNRRGDKVKPTR
>Mature_150_residues
MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGYKVVSTVLIVNERGERMTLDT
LQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIRQAQKQLGHTTIGMTEHYVRNRRGDKVKPTR

Specific function: Integrase From The Cryptic Lambdoic Prophage E14. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17324; Mature: 17324

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGY
CCCCCCCCCCCCHHHHCCHHHHHHCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHCCH
KVVSTVLIVNERGERMTLDTLQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIR
HHHHHHHEECCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
QAQKQLGHTTIGMTEHYVRNRRGDKVKPTR
HHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDLAYLTGQRPQDTLSHDERDIRDNFLHIDQGKTGKKLRMEISGELKALIDRIRARKAGY
CCCCCCCCCCCCHHHHCCHHHHHHCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHCCH
KVVSTVLIVNERGERMTLDTLQRRFREARRRAGIGDSEFQFRDLRAKAGTDKTDSTGDIR
HHHHHHHEECCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
QAQKQLGHTTIGMTEHYVRNRRGDKVKPTR
HHHHHHCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA