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The map label for this gene is rbn [C]

Identifier: 238024278

GI number: 238024278

Start: 1045307

End: 1046212

Strand: Reverse

Name: rbn [C]

Synonym: bglu_2g08610

Alternate gene names: 238024278

Gene position: 1046212-1045307 (Counterclockwise)

Preceding gene: 238024287

Following gene: 238024277

Centisome position: 37.0

GC content: 69.54

Gene sequence:

>906_bases
ATGAAGCCCTTGCTCTCGCAACCGCATGAAAAGCTCGTCAAGACCAACGTGAACTGGGCGCTCGACGCGTTCCGGCGTTT
CTCGGAGGACCACTGCACGACGATGGCCGCCGCCATCGCGTTCTACTCGGCGTTCTCGCTCGCGCCGATGCTGGTGATGG
TGATCGCCGTGGCAGGCTGGTTCTTCGGCGCCGACGCGGCGCGCGGCGAGGTGTTCAGCCAGGTCCACAGCCTGATCGGC
AACGAGGCCGCGGCCGGCGTGCAGACCATCGTCGAGAACGCGCACCGCAAGGGCAACGCCGGCGGCTTCGCGGCGGCCGT
CTCGGTACTGCTGCTGGTGGTGGGCGCGTCGGCCACGTTCTCGTCGCTGAACACCGCGCTCGGCGTGGTCTGGCCGGCCG
CCGAGAAGCGCTGGTCATCGATGTTCGGGCTGGTGCGGGTGCGGCTGATCTCGTTCGGCCTGGTGCTCGGCGTGGCGTTC
CTGCTGATCGTCTCGCTGATGCTCGACACGGCCATCACGTTCGTGGGCCGCTGGCTCTGGGGCAACACGCCGTTCGTGGT
GATCGGCAACCTGCTGCAGTTCACGGCCGGCATCGCGATCCTGGCCGCCGCGTTCGCCGCGCTGCTGAAGTTCCTGCCCG
ACGCCCATGTGACGCGCCGCGACGCGCTCACGGGCGGGATCGTCTCGGCCGTGCTGTTCTCGGCCGGCAAGAAGCTGTTC
GCGCTGTACCTGGCGCACGCGGGCACCGCCAGCGCGTTCGGCGCCGCCGGCTCGCTCGCGGTGCTGCTGATGTGGCTGTA
CTTCTCGGCGGCCGTGCTGCTGCTGGGTGCCGAATTCGCGGCCGCGCGCGGCCGCGCCGAGCAGGCGCACGCCTCAAACC
GCGACACCGCGACGCACAATTCCTGA

Upstream 100 bases:

>100_bases
CCGATCGAATACACTCGTCGGCAGGTCATGCCTCCGATCCGAAAACAACCATGAACGGCGCAACCATGAACGGCGCGCCG
CGCGTCCGACGTCACCGCCT

Downstream 100 bases:

>100_bases
CACGCGGGCGGGCTTCGCCGCAAGCGCCCCCACCGGCGGACCCGGTACGTTCGGCCTCGCCGGCACCGGGAACAAAATGA
CGCAACCGTTGCGCGCAAAC

Product: YihY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKPLLSQPHEKLVKTNVNWALDAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFSQVHSLIG
NEAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATFSSLNTALGVVWPAAEKRWSSMFGLVRVRLISFGLVLGVAF
LLIVSLMLDTAITFVGRWLWGNTPFVVIGNLLQFTAGIAILAAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLF
ALYLAHAGTASAFGAAGSLAVLLMWLYFSAAVLLLGAEFAAARGRAEQAHASNRDTATHNS

Sequences:

>Translated_301_residues
MKPLLSQPHEKLVKTNVNWALDAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFSQVHSLIG
NEAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATFSSLNTALGVVWPAAEKRWSSMFGLVRVRLISFGLVLGVAF
LLIVSLMLDTAITFVGRWLWGNTPFVVIGNLLQFTAGIAILAAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLF
ALYLAHAGTASAFGAAGSLAVLLMWLYFSAAVLLLGAEFAAARGRAEQAHASNRDTATHNS
>Mature_301_residues
MKPLLSQPHEKLVKTNVNWALDAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFSQVHSLIG
NEAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATFSSLNTALGVVWPAAEKRWSSMFGLVRVRLISFGLVLGVAF
LLIVSLMLDTAITFVGRWLWGNTPFVVIGNLLQFTAGIAILAAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLF
ALYLAHAGTASAFGAAGSLAVLLMWLYFSAAVLLLGAEFAAARGRAEQAHASNRDTATHNS

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=280, Percent_Identity=27.1428571428571, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31683; Mature: 31683

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLSQPHEKLVKTNVNWALDAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGW
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGADAARGEVFSQVHSLIGNEAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATF
HHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH
SSLNTALGVVWPAAEKRWSSMFGLVRVRLISFGLVLGVAFLLIVSLMLDTAITFVGRWLW
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNTPFVVIGNLLQFTAGIAILAAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALYLAHAGTASAFGAAGSLAVLLMWLYFSAAVLLLGAEFAAARGRAEQAHASNRDTATHN
HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
S
C
>Mature Secondary Structure
MKPLLSQPHEKLVKTNVNWALDAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGW
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGADAARGEVFSQVHSLIGNEAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATF
HHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH
SSLNTALGVVWPAAEKRWSSMFGLVRVRLISFGLVLGVAFLLIVSLMLDTAITFVGRWLW
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNTPFVVIGNLLQFTAGIAILAAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALYLAHAGTASAFGAAGSLAVLLMWLYFSAAVLLLGAEFAAARGRAEQAHASNRDTATHN
HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA